Name: rs10819689
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs10819689

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr9:99637981 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: C>A / C>T
Variation Type: SNV Single Nucleotide Variation
Frequency: T=0.199762 (59909/299902, ALFA)
T=0.203287 (53808/264690, TOPMED)
T=0.202417 (28370/140156, GnomAD) (+ 22 more)
T=0.18006 (14165/78668, PAGE_STUDY)
T=0.05945 (1680/28258, 14KJPN)
T=0.06062 (1016/16760, 8.3KJPN)
T=0.1633 (1046/6404, 1000G_30x)
T=0.1607 (805/5008, 1000G)
T=0.1545 (692/4480, Estonian)
T=0.2094 (807/3854, ALSPAC)
T=0.2201 (816/3708, TWINSUK)
T=0.0558 (163/2922, KOREAN)
T=0.1876 (391/2084, HGDP_Stanford)
T=0.1768 (332/1878, HapMap)
T=0.0622 (114/1832, Korea1K)
T=0.193 (193/998, GoNL)
T=0.076 (60/790, PRJEB37584)
T=0.238 (143/600, NorthernSweden)
T=0.264 (57/216, Qatari)
T=0.079 (17/216, Vietnamese)
C=0.402 (66/164, SGDP_PRJ)
T=0.12 (5/40, GENOME_DK)
T=0.33 (12/36, Ancient Sardinia)
C=0.5 (4/8, Siberian)
T=0.5 (4/8, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: LOC101928438 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	304938	C=0.800104	A=0.000000, T=0.199896	0.641822	0.041615	0.316563	9
European	Sub	269570	C=0.794795	A=0.000000, T=0.205205	0.63263	0.043039	0.324331	3
African	Sub	8658	C=0.8159	A=0.0000, T=0.1841	0.674983	0.043197	0.28182	9
African Others	Sub	342	C=0.819	A=0.000, T=0.181	0.684211	0.046784	0.269006	1
African American	Sub	8316	C=0.8158	A=0.0000, T=0.1842	0.674603	0.04305	0.282347	9
Asian	Sub	3920	C=0.9301	A=0.0000, T=0.0699	0.867347	0.007143	0.12551	2
East Asian	Sub	3180	C=0.9352	A=0.0000, T=0.0648	0.874843	0.004403	0.120755	0
Other Asian	Sub	740	C=0.908	A=0.000, T=0.092	0.835135	0.018919	0.145946	4
Latin American 1	Sub	1082	C=0.7902	A=0.0000, T=0.2098	0.617375	0.036969	0.345656	1
Latin American 2	Sub	6882	C=0.8524	A=0.0000, T=0.1476	0.726533	0.021796	0.251671	0
South Asian	Sub	5200	C=0.8723	A=0.0000, T=0.1277	0.765	0.020385	0.214615	2
Other	Sub	9626	C=0.8064	A=0.0000, T=0.1936	0.653231	0.040515	0.306254	1

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download

Study	Population	Group	Sample Size	Ref Allele	Alt Allele
Allele Frequency Aggregator	Total	Global	299902	C=0.800238	A=0.000000, T=0.199762
Allele Frequency Aggregator	European	Sub	266476	C=0.794743	A=0.000000, T=0.205257
Allele Frequency Aggregator	Other	Sub	8826	C=0.8078	A=0.0000, T=0.1922
Allele Frequency Aggregator	African	Sub	7516	C=0.8222	A=0.0000, T=0.1778
Allele Frequency Aggregator	Latin American 2	Sub	6882	C=0.8524	A=0.0000, T=0.1476
Allele Frequency Aggregator	South Asian	Sub	5200	C=0.8723	A=0.0000, T=0.1277
Allele Frequency Aggregator	Asian	Sub	3920	C=0.9301	A=0.0000, T=0.0699
Allele Frequency Aggregator	Latin American 1	Sub	1082	C=0.7902	A=0.0000, T=0.2098
TopMed	Global	Study-wide	264690	C=0.796713	T=0.203287
gnomAD - Genomes	Global	Study-wide	140156	C=0.797583	T=0.202417
gnomAD - Genomes	European	Sub	75906	C=0.80158	T=0.19842
gnomAD - Genomes	African	Sub	42002	C=0.78151	T=0.21849
gnomAD - Genomes	American	Sub	13644	C=0.80292	T=0.19708
gnomAD - Genomes	Ashkenazi Jewish	Sub	3322	C=0.7676	T=0.2324
gnomAD - Genomes	East Asian	Sub	3130	C=0.9214	T=0.0786
gnomAD - Genomes	Other	Sub	2152	C=0.8025	T=0.1975
The PAGE Study	Global	Study-wide	78668	C=0.81994	T=0.18006
The PAGE Study	AfricanAmerican	Sub	32504	C=0.78255	T=0.21745
The PAGE Study	Mexican	Sub	10804	C=0.85505	T=0.14495
The PAGE Study	Asian	Sub	8314	C=0.9381	T=0.0619
The PAGE Study	PuertoRican	Sub	7914	C=0.7899	T=0.2101
The PAGE Study	NativeHawaiian	Sub	4528	C=0.9004	T=0.0996
The PAGE Study	Cuban	Sub	4230	C=0.7745	T=0.2255
The PAGE Study	Dominican	Sub	3828	C=0.7714	T=0.2286
The PAGE Study	CentralAmerican	Sub	2448	C=0.8501	T=0.1499
The PAGE Study	SouthAmerican	Sub	1982	C=0.8153	T=0.1847
The PAGE Study	NativeAmerican	Sub	1260	C=0.8095	T=0.1905
The PAGE Study	SouthAsian	Sub	856	C=0.883	T=0.117
14KJPN	JAPANESE	Study-wide	28258	C=0.94055	T=0.05945
8.3KJPN	JAPANESE	Study-wide	16760	C=0.93938	T=0.06062
1000Genomes_30x	Global	Study-wide	6404	C=0.8367	T=0.1633
1000Genomes_30x	African	Sub	1786	C=0.8024	T=0.1976
1000Genomes_30x	Europe	Sub	1266	C=0.7741	T=0.2259
1000Genomes_30x	South Asian	Sub	1202	C=0.8602	T=0.1398
1000Genomes_30x	East Asian	Sub	1170	C=0.9350	T=0.0650
1000Genomes_30x	American	Sub	980	C=0.834	T=0.166
1000Genomes	Global	Study-wide	5008	C=0.8393	T=0.1607
1000Genomes	African	Sub	1322	C=0.7935	T=0.2065
1000Genomes	East Asian	Sub	1008	C=0.9355	T=0.0645
1000Genomes	Europe	Sub	1006	C=0.7843	T=0.2157
1000Genomes	South Asian	Sub	978	C=0.867	T=0.133
1000Genomes	American	Sub	694	C=0.827	T=0.173
Genetic variation in the Estonian population	Estonian	Study-wide	4480	C=0.8455	T=0.1545
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	C=0.7906	T=0.2094
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	C=0.7799	T=0.2201
KOREAN population from KRGDB	KOREAN	Study-wide	2922	C=0.9442	T=0.0558
HGDP-CEPH-db Supplement 1	Global	Study-wide	2084	C=0.8124	T=0.1876
HGDP-CEPH-db Supplement 1	Est_Asia	Sub	470	C=0.936	T=0.064
HGDP-CEPH-db Supplement 1	Central_South_Asia	Sub	414	C=0.819	T=0.181
HGDP-CEPH-db Supplement 1	Middle_Est	Sub	350	C=0.754	T=0.246
HGDP-CEPH-db Supplement 1	Europe	Sub	320	C=0.784	T=0.216
HGDP-CEPH-db Supplement 1	Africa	Sub	242	C=0.583	T=0.417
HGDP-CEPH-db Supplement 1	America	Sub	216	C=0.884	T=0.116
HGDP-CEPH-db Supplement 1	Oceania	Sub	72	C=0.93	T=0.07
HapMap	Global	Study-wide	1878	C=0.8232	T=0.1768
HapMap	American	Sub	766	C=0.856	T=0.144
HapMap	African	Sub	686	C=0.758	T=0.242
HapMap	Asian	Sub	250	C=0.956	T=0.044
HapMap	Europe	Sub	176	C=0.744	T=0.256
Korean Genome Project	KOREAN	Study-wide	1832	C=0.9378	T=0.0622
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	C=0.807	T=0.193
CNV burdens in cranial meningiomas	Global	Study-wide	790	C=0.924	T=0.076
CNV burdens in cranial meningiomas	CRM	Sub	790	C=0.924	T=0.076
Northern Sweden	ACPOP	Study-wide	600	C=0.762	T=0.238
Qatari	Global	Study-wide	216	C=0.736	T=0.264
A Vietnamese Genetic Variation Database	Global	Study-wide	216	C=0.921	T=0.079
SGDP_PRJ	Global	Study-wide	164	C=0.402	T=0.598
The Danish reference pan genome	Danish	Study-wide	40	C=0.88	T=0.12
Ancient Sardinia genome-wide 1240k capture data generation and analysis	Global	Study-wide	36	C=0.67	T=0.33
Siberian	Global	Study-wide	8	C=0.5	T=0.5

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 9	NC_000009.12:g.99637981C>A
GRCh38.p14 chr 9	NC_000009.12:g.99637981C>T
GRCh37.p13 chr 9	NC_000009.11:g.102400263C>A
GRCh37.p13 chr 9	NC_000009.11:g.102400263C>T

Gene: LOC101928438, uncharacterized LOC101928438 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
LOC101928438 transcript	NR_109802.1:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	C=	A	T
GRCh38.p14 chr 9	NC_000009.12:g.99637981=	NC_000009.12:g.99637981C>A	NC_000009.12:g.99637981C>T
GRCh37.p13 chr 9	NC_000009.11:g.102400263=	NC_000009.11:g.102400263C>A	NC_000009.11:g.102400263C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

124 SubSNP, 24 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	SC_SNP	ss16310251	Feb 27, 2004 (120)
2	CSHL-HAPMAP	ss17267471	Feb 27, 2004 (120)
3	SC_SNP	ss18587765	Feb 27, 2004 (120)
4	ABI	ss43874482	Mar 13, 2006 (126)
5	ILLUMINA	ss66666918	Nov 30, 2006 (127)
6	ILLUMINA	ss66902619	Nov 30, 2006 (127)
7	ILLUMINA	ss67023514	Nov 30, 2006 (127)
8	ILLUMINA	ss70380917	May 17, 2007 (127)
9	ILLUMINA	ss70500082	May 25, 2008 (130)
10	ILLUMINA	ss71025872	May 17, 2007 (127)
11	ILLUMINA	ss75572608	Dec 07, 2007 (129)
12	KRIBB_YJKIM	ss85007016	Dec 15, 2007 (130)
13	HGSV	ss85125746	Dec 15, 2007 (130)
14	ILLUMINA-UK	ss115769136	Feb 14, 2009 (130)
15	ILLUMINA	ss121395526	Dec 01, 2009 (131)
16	ILLUMINA	ss152835322	Dec 01, 2009 (131)
17	ILLUMINA	ss159145048	Dec 01, 2009 (131)
18	ILLUMINA	ss159925254	Dec 01, 2009 (131)
19	ENSEMBL	ss161680624	Dec 01, 2009 (131)
20	COMPLETE_GENOMICS	ss164521854	Jul 04, 2010 (132)
21	COMPLETE_GENOMICS	ss166742242	Jul 04, 2010 (132)
22	ILLUMINA	ss169643528	Jul 04, 2010 (132)
23	ILLUMINA	ss170587197	Jul 04, 2010 (132)
24	BUSHMAN	ss200667289	Jul 04, 2010 (132)
25	1000GENOMES	ss224361037	Jul 14, 2010 (132)
26	1000GENOMES	ss234902311	Jul 15, 2010 (132)
27	1000GENOMES	ss241662074	Jul 15, 2010 (132)
28	BL	ss254426603	May 09, 2011 (134)
29	GMI	ss280331816	May 04, 2012 (137)
30	GMI	ss286062775	Apr 25, 2013 (138)
31	PJP	ss294336191	May 09, 2011 (134)
32	ILLUMINA	ss479363240	May 04, 2012 (137)
33	ILLUMINA	ss479366233	May 04, 2012 (137)
34	ILLUMINA	ss479766922	Sep 08, 2015 (146)
35	ILLUMINA	ss484481773	May 04, 2012 (137)
36	ILLUMINA	ss536639191	Sep 08, 2015 (146)
37	TISHKOFF	ss561522235	Apr 25, 2013 (138)
38	SSMP	ss656017821	Apr 25, 2013 (138)
39	ILLUMINA	ss778366266	Sep 08, 2015 (146)
40	ILLUMINA	ss782687406	Sep 08, 2015 (146)
41	ILLUMINA	ss783655748	Sep 08, 2015 (146)
42	ILLUMINA	ss825350471	Apr 01, 2015 (144)
43	ILLUMINA	ss831938300	Sep 08, 2015 (146)
44	ILLUMINA	ss832657684	Jul 13, 2019 (153)
45	ILLUMINA	ss833821099	Sep 08, 2015 (146)
46	EVA-GONL	ss986797513	Aug 21, 2014 (142)
47	JMKIDD_LAB	ss1076472567	Aug 21, 2014 (142)
48	1000GENOMES	ss1334774632	Aug 21, 2014 (142)
49	DDI	ss1431908015	Apr 01, 2015 (144)
50	EVA_GENOME_DK	ss1583188025	Apr 01, 2015 (144)
51	EVA_DECODE	ss1596433661	Apr 01, 2015 (144)
52	EVA_UK10K_ALSPAC	ss1623196606	Apr 01, 2015 (144)
53	EVA_UK10K_TWINSUK	ss1666190639	Apr 01, 2015 (144)
54	EVA_SVP	ss1713126321	Apr 01, 2015 (144)
55	ILLUMINA	ss1752749654	Sep 08, 2015 (146)
56	HAMMER_LAB	ss1806083229	Sep 08, 2015 (146)
57	WEILL_CORNELL_DGM	ss1930111826	Feb 12, 2016 (147)
58	ILLUMINA	ss1946263870	Feb 12, 2016 (147)
59	ILLUMINA	ss1959200646	Feb 12, 2016 (147)
60	GENOMED	ss1971266409	Jul 19, 2016 (147)
61	JJLAB	ss2025774443	Sep 14, 2016 (149)
62	USC_VALOUEV	ss2154002639	Dec 20, 2016 (150)
63	HUMAN_LONGEVITY	ss2313016573	Dec 20, 2016 (150)
64	ILLUMINA	ss2634894380	Nov 08, 2017 (151)
65	GRF	ss2709876785	Nov 08, 2017 (151)
66	ILLUMINA	ss2711167538	Nov 08, 2017 (151)
67	GNOMAD	ss2881288058	Nov 08, 2017 (151)
68	SWEGEN	ss3005313816	Nov 08, 2017 (151)
69	ILLUMINA	ss3022947996	Nov 08, 2017 (151)
70	BIOINF_KMB_FNS_UNIBA	ss3026667964	Nov 08, 2017 (151)
71	CSHL	ss3348778321	Nov 08, 2017 (151)
72	ILLUMINA	ss3625987797	Oct 12, 2018 (152)
73	ILLUMINA	ss3630315190	Oct 12, 2018 (152)
74	ILLUMINA	ss3632785032	Oct 12, 2018 (152)
75	ILLUMINA	ss3633541651	Oct 12, 2018 (152)
76	ILLUMINA	ss3634270291	Oct 12, 2018 (152)
77	ILLUMINA	ss3635223840	Oct 12, 2018 (152)
78	ILLUMINA	ss3635948107	Oct 12, 2018 (152)
79	ILLUMINA	ss3636972187	Oct 12, 2018 (152)
80	ILLUMINA	ss3637701458	Oct 12, 2018 (152)
81	ILLUMINA	ss3638825690	Oct 12, 2018 (152)
82	ILLUMINA	ss3639418033	Oct 12, 2018 (152)
83	ILLUMINA	ss3639742358	Oct 12, 2018 (152)
84	ILLUMINA	ss3640931131	Oct 12, 2018 (152)
85	ILLUMINA	ss3643751736	Oct 12, 2018 (152)
86	ILLUMINA	ss3644997203	Oct 12, 2018 (152)
87	ILLUMINA	ss3653501521	Oct 12, 2018 (152)
88	EGCUT_WGS	ss3672848424	Jul 13, 2019 (153)
89	EVA_DECODE	ss3724415498	Jul 13, 2019 (153)
90	ILLUMINA	ss3726628288	Jul 13, 2019 (153)
91	ACPOP	ss3736724860	Jul 13, 2019 (153)
92	ILLUMINA	ss3744322773	Jul 13, 2019 (153)
93	ILLUMINA	ss3745523759	Jul 13, 2019 (153)
94	EVA	ss3769476883	Jul 13, 2019 (153)
95	PAGE_CC	ss3771513407	Jul 13, 2019 (153)
96	ILLUMINA	ss3773015671	Jul 13, 2019 (153)
97	KHV_HUMAN_GENOMES	ss3812643455	Jul 13, 2019 (153)
98	EVA	ss3831770596	Apr 26, 2020 (154)
99	HGDP	ss3847956178	Apr 26, 2020 (154)
100	SGDP_PRJ	ss3872715705	Apr 26, 2020 (154)
101	KRGDB	ss3920552167	Apr 26, 2020 (154)
102	KOGIC	ss3966410365	Apr 26, 2020 (154)
103	EVA	ss3984623101	Apr 26, 2021 (155)
104	EVA	ss3985433673	Apr 26, 2021 (155)
105	EVA	ss4017449431	Apr 26, 2021 (155)
106	TOPMED	ss4829660123	Apr 26, 2021 (155)
107	TOMMO_GENOMICS	ss5194529068	Apr 26, 2021 (155)
108	EVA	ss5237463570	Apr 26, 2021 (155)
109	1000G_HIGH_COVERAGE	ss5281584050	Oct 13, 2022 (156)
110	EVA	ss5315419341	Oct 13, 2022 (156)
111	HUGCELL_USP	ss5477508014	Oct 13, 2022 (156)
112	1000G_HIGH_COVERAGE	ss5574343161	Oct 13, 2022 (156)
113	SANFORD_IMAGENETICS	ss5624725453	Oct 13, 2022 (156)
114	SANFORD_IMAGENETICS	ss5647927915	Oct 13, 2022 (156)
115	TOMMO_GENOMICS	ss5738835373	Oct 13, 2022 (156)
116	EVA	ss5799790963	Oct 13, 2022 (156)
117	YY_MCH	ss5810854675	Oct 13, 2022 (156)
118	EVA	ss5829512472	Oct 13, 2022 (156)
119	EVA	ss5847360014	Oct 13, 2022 (156)
120	EVA	ss5848213082	Oct 13, 2022 (156)
121	EVA	ss5856862748	Oct 13, 2022 (156)
122	EVA	ss5917337678	Oct 13, 2022 (156)
123	EVA	ss5977118990	Oct 13, 2022 (156)
124	EVA	ss5979900355	Oct 13, 2022 (156)
125	1000Genomes	NC_000009.11 - 102400263	Oct 12, 2018 (152)
126	1000Genomes_30x	NC_000009.12 - 99637981	Oct 13, 2022 (156)
127	The Avon Longitudinal Study of Parents and Children	NC_000009.11 - 102400263	Oct 12, 2018 (152)
128	Genetic variation in the Estonian population	NC_000009.11 - 102400263	Oct 12, 2018 (152)
129	The Danish reference pan genome	NC_000009.11 - 102400263	Apr 26, 2020 (154)
130	gnomAD - Genomes	NC_000009.12 - 99637981	Apr 26, 2021 (155)
131	Genome of the Netherlands Release 5	NC_000009.11 - 102400263	Apr 26, 2020 (154)
132	HGDP-CEPH-db Supplement 1	NC_000009.10 - 101440084	Apr 26, 2020 (154)
133	HapMap	NC_000009.12 - 99637981	Apr 26, 2020 (154)
134	KOREAN population from KRGDB	NC_000009.11 - 102400263	Apr 26, 2020 (154)
135	Korean Genome Project	NC_000009.12 - 99637981	Apr 26, 2020 (154)
136	Northern Sweden	NC_000009.11 - 102400263	Jul 13, 2019 (153)
137	The PAGE Study	NC_000009.12 - 99637981	Jul 13, 2019 (153)
138	Ancient Sardinia genome-wide 1240k capture data generation and analysis	NC_000009.11 - 102400263	Apr 26, 2021 (155)
139	CNV burdens in cranial meningiomas	NC_000009.11 - 102400263	Apr 26, 2021 (155)
140	Qatari	NC_000009.11 - 102400263	Apr 26, 2020 (154)
141	SGDP_PRJ	NC_000009.11 - 102400263	Apr 26, 2020 (154)
142	Siberian	NC_000009.11 - 102400263	Apr 26, 2020 (154)
143	8.3KJPN	NC_000009.11 - 102400263	Apr 26, 2021 (155)
144	14KJPN	NC_000009.12 - 99637981	Oct 13, 2022 (156)
145	TopMed	NC_000009.12 - 99637981	Apr 26, 2021 (155)
146	UK 10K study - Twins	NC_000009.11 - 102400263	Oct 12, 2018 (152)
147	A Vietnamese Genetic Variation Database	NC_000009.11 - 102400263	Jul 13, 2019 (153)
148	ALFA	NC_000009.12 - 99637981	Apr 26, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs59541130	May 25, 2008 (130)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
12594202059	NC_000009.12:99637980:C:A	NC_000009.12:99637980:C:A	(self)
ss85125746, ss3639418033, ss3639742358	NC_000009.9:99479817:C:T	NC_000009.12:99637980:C:T	(self)
634070, ss115769136, ss164521854, ss166742242, ss200667289, ss254426603, ss280331816, ss286062775, ss294336191, ss479363240, ss825350471, ss1596433661, ss1713126321, ss3643751736, ss3847956178	NC_000009.10:101440083:C:T	NC_000009.12:99637980:C:T	(self)
47067893, 26146104, 18586672, 9352962, 11667572, 27729561, 10009725, 659600, 172551, 12153756, 24732685, 6518993, 52498375, 26146104, 5807923, ss224361037, ss234902311, ss241662074, ss479366233, ss479766922, ss484481773, ss536639191, ss561522235, ss656017821, ss778366266, ss782687406, ss783655748, ss831938300, ss832657684, ss833821099, ss986797513, ss1076472567, ss1334774632, ss1431908015, ss1583188025, ss1623196606, ss1666190639, ss1752749654, ss1806083229, ss1930111826, ss1946263870, ss1959200646, ss1971266409, ss2025774443, ss2154002639, ss2634894380, ss2709876785, ss2711167538, ss2881288058, ss3005313816, ss3022947996, ss3348778321, ss3625987797, ss3630315190, ss3632785032, ss3633541651, ss3634270291, ss3635223840, ss3635948107, ss3636972187, ss3637701458, ss3638825690, ss3640931131, ss3644997203, ss3653501521, ss3672848424, ss3736724860, ss3744322773, ss3745523759, ss3769476883, ss3773015671, ss3831770596, ss3872715705, ss3920552167, ss3984623101, ss3985433673, ss4017449431, ss5194529068, ss5237463570, ss5315419341, ss5624725453, ss5647927915, ss5799790963, ss5829512472, ss5847360014, ss5848213082, ss5977118990, ss5979900355	NC_000009.11:102400262:C:T	NC_000009.12:99637980:C:T	(self)
61869096, 332744193, 3878360, 22788366, 734876, 72672477, 667037684, 12594202059, ss2313016573, ss3026667964, ss3724415498, ss3726628288, ss3771513407, ss3812643455, ss3966410365, ss4829660123, ss5281584050, ss5477508014, ss5574343161, ss5738835373, ss5810854675, ss5856862748, ss5917337678	NC_000009.12:99637980:C:T	NC_000009.12:99637980:C:T	(self)
ss16310251, ss17267471, ss18587765	NT_008470.16:4061790:C:T	NC_000009.12:99637980:C:T	(self)
ss43874482, ss66666918, ss66902619, ss67023514, ss70380917, ss70500082, ss71025872, ss75572608, ss85007016, ss121395526, ss152835322, ss159145048, ss159925254, ss161680624, ss169643528, ss170587197	NT_008470.19:31564794:C:T	NC_000009.12:99637980:C:T	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs10819689

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
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NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs10819689