Name: rs11578098
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs11578098

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:92653853 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: G>A
Variation Type: SNV Single Nucleotide Variation
Frequency: A=0.187030 (49505/264690, TOPMED)
A=0.198050 (27754/140136, GnomAD)
A=0.01447 (409/28256, 14KJPN) (+ 17 more)
A=0.21842 (4126/18890, ALFA)
A=0.01551 (260/16760, 8.3KJPN)
A=0.1235 (791/6404, 1000G_30x)
A=0.1234 (618/5008, 1000G)
A=0.2377 (1065/4480, Estonian)
A=0.2558 (986/3854, ALSPAC)
A=0.2611 (968/3708, TWINSUK)
A=0.0133 (39/2922, KOREAN)
A=0.0076 (14/1832, Korea1K)
A=0.229 (229/998, GoNL)
A=0.247 (148/600, NorthernSweden)
A=0.107 (35/326, HapMap)
A=0.185 (40/216, Qatari)
A=0.024 (5/212, Vietnamese)
G=0.453 (58/128, SGDP_PRJ)
A=0.25 (10/40, GENOME_DK)
G=0.42 (11/26, Siberian)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: EVI5 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	18890	G=0.78158	A=0.21842	0.615881	0.052726	0.331392	5
European	Sub	14286	G=0.74773	A=0.25227	0.559289	0.063839	0.376872	0
African	Sub	2946	G=0.9162	A=0.0838	0.839104	0.006789	0.154107	0
African Others	Sub	114	G=0.886	A=0.114	0.77193	0.0	0.22807	1
African American	Sub	2832	G=0.9174	A=0.0826	0.841808	0.007062	0.15113	0
Asian	Sub	112	G=0.982	A=0.018	0.964286	0.0	0.035714	0
East Asian	Sub	86	G=0.99	A=0.01	0.976744	0.0	0.023256	0
Other Asian	Sub	26	G=0.96	A=0.04	0.923077	0.0	0.076923	0
Latin American 1	Sub	146	G=0.836	A=0.164	0.684932	0.013699	0.30137	0
Latin American 2	Sub	610	G=0.826	A=0.174	0.704918	0.052459	0.242623	4
South Asian	Sub	98	G=0.91	A=0.09	0.816327	0.0	0.183673	0
Other	Sub	692	G=0.806	A=0.194	0.656069	0.043353	0.300578	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	G=0.812970	A=0.187030
gnomAD - Genomes	Global	Study-wide	140136	G=0.801950	A=0.198050
gnomAD - Genomes	European	Sub	75852	G=0.74644	A=0.25356
gnomAD - Genomes	African	Sub	42030	G=0.90452	A=0.09548
gnomAD - Genomes	American	Sub	13646	G=0.77715	A=0.22285
gnomAD - Genomes	Ashkenazi Jewish	Sub	3324	G=0.7265	A=0.2735
gnomAD - Genomes	East Asian	Sub	3132	G=0.9748	A=0.0252
gnomAD - Genomes	Other	Sub	2152	G=0.7774	A=0.2226
14KJPN	JAPANESE	Study-wide	28256	G=0.98553	A=0.01447
Allele Frequency Aggregator	Total	Global	18890	G=0.78158	A=0.21842
Allele Frequency Aggregator	European	Sub	14286	G=0.74773	A=0.25227
Allele Frequency Aggregator	African	Sub	2946	G=0.9162	A=0.0838
Allele Frequency Aggregator	Other	Sub	692	G=0.806	A=0.194
Allele Frequency Aggregator	Latin American 2	Sub	610	G=0.826	A=0.174
Allele Frequency Aggregator	Latin American 1	Sub	146	G=0.836	A=0.164
Allele Frequency Aggregator	Asian	Sub	112	G=0.982	A=0.018
Allele Frequency Aggregator	South Asian	Sub	98	G=0.91	A=0.09
8.3KJPN	JAPANESE	Study-wide	16760	G=0.98449	A=0.01551
1000Genomes_30x	Global	Study-wide	6404	G=0.8765	A=0.1235
1000Genomes_30x	African	Sub	1786	G=0.9339	A=0.0661
1000Genomes_30x	Europe	Sub	1266	G=0.7259	A=0.2741
1000Genomes_30x	South Asian	Sub	1202	G=0.8894	A=0.1106
1000Genomes_30x	East Asian	Sub	1170	G=0.9838	A=0.0162
1000Genomes_30x	American	Sub	980	G=0.822	A=0.178
1000Genomes	Global	Study-wide	5008	G=0.8766	A=0.1234
1000Genomes	African	Sub	1322	G=0.9304	A=0.0696
1000Genomes	East Asian	Sub	1008	G=0.9831	A=0.0169
1000Genomes	Europe	Sub	1006	G=0.7247	A=0.2753
1000Genomes	South Asian	Sub	978	G=0.896	A=0.104
1000Genomes	American	Sub	694	G=0.813	A=0.187
Genetic variation in the Estonian population	Estonian	Study-wide	4480	G=0.7623	A=0.2377
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	G=0.7442	A=0.2558
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	G=0.7389	A=0.2611
KOREAN population from KRGDB	KOREAN	Study-wide	2922	G=0.9867	A=0.0133
Korean Genome Project	KOREAN	Study-wide	1832	G=0.9924	A=0.0076
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	G=0.771	A=0.229
Northern Sweden	ACPOP	Study-wide	600	G=0.753	A=0.247
HapMap	Global	Study-wide	326	G=0.893	A=0.107
HapMap	African	Sub	120	G=0.917	A=0.083
HapMap	American	Sub	116	G=0.793	A=0.207
HapMap	Asian	Sub	90	G=0.99	A=0.01
Qatari	Global	Study-wide	216	G=0.815	A=0.185
A Vietnamese Genetic Variation Database	Global	Study-wide	212	G=0.976	A=0.024
SGDP_PRJ	Global	Study-wide	128	G=0.453	A=0.547
The Danish reference pan genome	Danish	Study-wide	40	G=0.75	A=0.25
Siberian	Global	Study-wide	26	G=0.42	A=0.58

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.92653853G>A
GRCh37.p13 chr 1	NC_000001.10:g.93119410G>A

Gene: EVI5, ecotropic viral integration site 5 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
EVI5 transcript variant 1	NM_001308248.2:c.1377+956… NM_001308248.2:c.1377+9567C>T	N/A	Intron Variant
EVI5 transcript variant 3	NM_001350197.2:c.1392+886… NM_001350197.2:c.1392+8866C>T	N/A	Intron Variant
EVI5 transcript variant 4	NM_001350198.2:c.1392+886… NM_001350198.2:c.1392+8866C>T	N/A	Intron Variant
EVI5 transcript variant 5	NM_001377210.1:c.1368+956… NM_001377210.1:c.1368+9567C>T	N/A	Intron Variant
EVI5 transcript variant 6	NM_001377211.1:c.1392+886… NM_001377211.1:c.1392+8866C>T	N/A	Intron Variant
EVI5 transcript variant 7	NM_001377212.1:c.1245+956… NM_001377212.1:c.1245+9567C>T	N/A	Intron Variant
EVI5 transcript variant 8	NM_001377213.1:c.1473+886… NM_001377213.1:c.1473+8866C>T	N/A	Intron Variant
EVI5 transcript variant 2	NM_005665.6:c.1344+12086C… NM_005665.6:c.1344+12086C>T	N/A	Intron Variant
EVI5 transcript variant X1	XM_017002269.2:c.1605+886… XM_017002269.2:c.1605+8866C>T	N/A	Intron Variant
EVI5 transcript variant X2	XM_017002270.3:c.1596+886… XM_017002270.3:c.1596+8866C>T	N/A	Intron Variant
EVI5 transcript variant X3	XM_017002271.3:c.1524+886… XM_017002271.3:c.1524+8866C>T	N/A	Intron Variant
EVI5 transcript variant X5	XM_017002272.2:c.1605+886… XM_017002272.2:c.1605+8866C>T	N/A	Intron Variant
EVI5 transcript variant X6	XM_017002273.3:c.1473+886… XM_017002273.3:c.1473+8866C>T	N/A	Intron Variant
EVI5 transcript variant X7	XM_017002274.1:c.1473+886… XM_017002274.1:c.1473+8866C>T	N/A	Intron Variant
EVI5 transcript variant X8	XM_017002275.1:c.1473+886… XM_017002275.1:c.1473+8866C>T	N/A	Intron Variant
EVI5 transcript variant X10	XM_017002277.2:c.1377+956… XM_017002277.2:c.1377+9567C>T	N/A	Intron Variant
EVI5 transcript variant X12	XM_017002278.2:c.1458+956… XM_017002278.2:c.1458+9567C>T	N/A	Intron Variant
EVI5 transcript variant X14	XM_017002279.2:c.1338+886… XM_017002279.2:c.1338+8866C>T	N/A	Intron Variant
EVI5 transcript variant X17	XM_017002282.2:c.1605+886… XM_017002282.2:c.1605+8866C>T	N/A	Intron Variant
EVI5 transcript variant X18	XM_017002286.3:c.981+8866… XM_017002286.3:c.981+8866C>T	N/A	Intron Variant
EVI5 transcript variant X19	XM_017002288.1:c.981+8866… XM_017002288.1:c.981+8866C>T	N/A	Intron Variant
EVI5 transcript variant X9	XM_024449686.2:c.1524+886… XM_024449686.2:c.1524+8866C>T	N/A	Intron Variant
EVI5 transcript variant X15	XM_024449689.2:c.1425+120… XM_024449689.2:c.1425+12086C>T	N/A	Intron Variant
EVI5 transcript variant X16	XM_024449690.2:c.1257+886… XM_024449690.2:c.1257+8866C>T	N/A	Intron Variant
EVI5 transcript variant X4	XM_047430040.1:c.1515+886… XM_047430040.1:c.1515+8866C>T	N/A	Intron Variant
EVI5 transcript variant X11	XM_047430051.1:c.1368+956… XM_047430051.1:c.1368+9567C>T	N/A	Intron Variant
EVI5 transcript variant X13	XM_047430054.1:c.1344+120… XM_047430054.1:c.1344+12086C>T	N/A	Intron Variant
EVI5 transcript variant X20	XR_001737401.2:n.	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	G=	A
GRCh38.p14 chr 1	NC_000001.11:g.92653853=	NC_000001.11:g.92653853G>A
GRCh37.p13 chr 1	NC_000001.10:g.93119410=	NC_000001.10:g.93119410G>A
EVI5 transcript variant 1	NM_001308248.2:c.1377+9567=	NM_001308248.2:c.1377+9567C>T
EVI5 transcript variant 3	NM_001350197.2:c.1392+8866=	NM_001350197.2:c.1392+8866C>T
EVI5 transcript variant 4	NM_001350198.2:c.1392+8866=	NM_001350198.2:c.1392+8866C>T
EVI5 transcript variant 5	NM_001377210.1:c.1368+9567=	NM_001377210.1:c.1368+9567C>T
EVI5 transcript variant 6	NM_001377211.1:c.1392+8866=	NM_001377211.1:c.1392+8866C>T
EVI5 transcript variant 7	NM_001377212.1:c.1245+9567=	NM_001377212.1:c.1245+9567C>T
EVI5 transcript variant 8	NM_001377213.1:c.1473+8866=	NM_001377213.1:c.1473+8866C>T
EVI5 transcript	NM_005665.4:c.1344+12086=	NM_005665.4:c.1344+12086C>T
EVI5 transcript variant 2	NM_005665.6:c.1344+12086=	NM_005665.6:c.1344+12086C>T
EVI5 transcript variant X1	XM_005271179.1:c.1515+8866=	XM_005271179.1:c.1515+8866C>T
EVI5 transcript variant X2	XM_005271180.1:c.1392+8866=	XM_005271180.1:c.1392+8866C>T
EVI5 transcript variant X3	XM_005271181.1:c.1377+9567=	XM_005271181.1:c.1377+9567C>T
EVI5 transcript variant X4	XM_005271182.1:c.1257+8866=	XM_005271182.1:c.1257+8866C>T
EVI5 transcript variant X1	XM_017002269.2:c.1605+8866=	XM_017002269.2:c.1605+8866C>T
EVI5 transcript variant X2	XM_017002270.3:c.1596+8866=	XM_017002270.3:c.1596+8866C>T
EVI5 transcript variant X3	XM_017002271.3:c.1524+8866=	XM_017002271.3:c.1524+8866C>T
EVI5 transcript variant X5	XM_017002272.2:c.1605+8866=	XM_017002272.2:c.1605+8866C>T
EVI5 transcript variant X6	XM_017002273.3:c.1473+8866=	XM_017002273.3:c.1473+8866C>T
EVI5 transcript variant X7	XM_017002274.1:c.1473+8866=	XM_017002274.1:c.1473+8866C>T
EVI5 transcript variant X8	XM_017002275.1:c.1473+8866=	XM_017002275.1:c.1473+8866C>T
EVI5 transcript variant X10	XM_017002277.2:c.1377+9567=	XM_017002277.2:c.1377+9567C>T
EVI5 transcript variant X12	XM_017002278.2:c.1458+9567=	XM_017002278.2:c.1458+9567C>T
EVI5 transcript variant X14	XM_017002279.2:c.1338+8866=	XM_017002279.2:c.1338+8866C>T
EVI5 transcript variant X17	XM_017002282.2:c.1605+8866=	XM_017002282.2:c.1605+8866C>T
EVI5 transcript variant X18	XM_017002286.3:c.981+8866=	XM_017002286.3:c.981+8866C>T
EVI5 transcript variant X19	XM_017002288.1:c.981+8866=	XM_017002288.1:c.981+8866C>T
EVI5 transcript variant X9	XM_024449686.2:c.1524+8866=	XM_024449686.2:c.1524+8866C>T
EVI5 transcript variant X15	XM_024449689.2:c.1425+12086=	XM_024449689.2:c.1425+12086C>T
EVI5 transcript variant X16	XM_024449690.2:c.1257+8866=	XM_024449690.2:c.1257+8866C>T
EVI5 transcript variant X4	XM_047430040.1:c.1515+8866=	XM_047430040.1:c.1515+8866C>T
EVI5 transcript variant X11	XM_047430051.1:c.1368+9567=	XM_047430051.1:c.1368+9567C>T
EVI5 transcript variant X13	XM_047430054.1:c.1344+12086=	XM_047430054.1:c.1344+12086C>T

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

64 SubSNP, 20 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	CSHL-HAPMAP	ss16394528	Feb 28, 2004 (120)
2	ABI	ss41352330	Mar 15, 2006 (126)
3	HUMANGENOME_JCVI	ss99228540	Feb 05, 2009 (130)
4	1000GENOMES	ss108414991	Jan 23, 2009 (130)
5	ENSEMBL	ss161284788	Dec 01, 2009 (131)
6	COMPLETE_GENOMICS	ss164790225	Jul 04, 2010 (132)
7	COMPLETE_GENOMICS	ss166850920	Jul 04, 2010 (132)
8	BUSHMAN	ss198778721	Jul 04, 2010 (132)
9	1000GENOMES	ss218525098	Jul 14, 2010 (132)
10	1000GENOMES	ss230638304	Jul 14, 2010 (132)
11	TISHKOFF	ss554432039	Apr 25, 2013 (138)
12	SSMP	ss648221552	Apr 25, 2013 (138)
13	EVA-GONL	ss975433230	Aug 21, 2014 (142)
14	JMKIDD_LAB	ss1068092250	Aug 21, 2014 (142)
15	1000GENOMES	ss1291921432	Aug 21, 2014 (142)
16	DDI	ss1425897421	Apr 01, 2015 (144)
17	EVA_GENOME_DK	ss1574234176	Apr 01, 2015 (144)
18	EVA_DECODE	ss1584809350	Apr 01, 2015 (144)
19	EVA_UK10K_ALSPAC	ss1600715473	Apr 01, 2015 (144)
20	EVA_UK10K_TWINSUK	ss1643709506	Apr 01, 2015 (144)
21	WEILL_CORNELL_DGM	ss1918634169	Feb 12, 2016 (147)
22	GENOMED	ss1966809295	Jul 19, 2016 (147)
23	JJLAB	ss2019838735	Sep 14, 2016 (149)
24	ILLUMINA	ss2094844636	Dec 20, 2016 (150)
25	ILLUMINA	ss2094966671	Dec 20, 2016 (150)
26	USC_VALOUEV	ss2147856637	Dec 20, 2016 (150)
27	HUMAN_LONGEVITY	ss2164630186	Dec 20, 2016 (150)
28	SYSTEMSBIOZJU	ss2624430661	Nov 08, 2017 (151)
29	GRF	ss2697782291	Nov 08, 2017 (151)
30	GNOMAD	ss2758094682	Nov 08, 2017 (151)
31	SWEGEN	ss2987230617	Nov 08, 2017 (151)
32	BIOINF_KMB_FNS_UNIBA	ss3023682124	Nov 08, 2017 (151)
33	CSHL	ss3343574599	Nov 08, 2017 (151)
34	URBANLAB	ss3646720671	Oct 11, 2018 (152)
35	ILLUMINA	ss3651439894	Oct 11, 2018 (152)
36	EGCUT_WGS	ss3655309170	Jul 12, 2019 (153)
37	EVA_DECODE	ss3687275559	Jul 12, 2019 (153)
38	ACPOP	ss3727273006	Jul 12, 2019 (153)
39	EVA	ss3746517081	Jul 12, 2019 (153)
40	PACBIO	ss3783483229	Jul 12, 2019 (153)
41	PACBIO	ss3789130296	Jul 12, 2019 (153)
42	PACBIO	ss3794003117	Jul 12, 2019 (153)
43	KHV_HUMAN_GENOMES	ss3799521354	Jul 12, 2019 (153)
44	EVA	ss3826303566	Apr 25, 2020 (154)
45	EVA	ss3836542172	Apr 25, 2020 (154)
46	EVA	ss3841949872	Apr 25, 2020 (154)
47	SGDP_PRJ	ss3849382641	Apr 25, 2020 (154)
48	KRGDB	ss3894448521	Apr 25, 2020 (154)
49	KOGIC	ss3945002580	Apr 25, 2020 (154)
50	TOPMED	ss4458974527	Apr 25, 2021 (155)
51	TOMMO_GENOMICS	ss5145101511	Apr 25, 2021 (155)
52	1000G_HIGH_COVERAGE	ss5243162143	Oct 12, 2022 (156)
53	EVA	ss5320373030	Oct 12, 2022 (156)
54	HUGCELL_USP	ss5444129459	Oct 12, 2022 (156)
55	EVA	ss5505947542	Oct 12, 2022 (156)
56	1000G_HIGH_COVERAGE	ss5515914958	Oct 12, 2022 (156)
57	SANFORD_IMAGENETICS	ss5626042323	Oct 12, 2022 (156)
58	TOMMO_GENOMICS	ss5670200782	Oct 12, 2022 (156)
59	YY_MCH	ss5800820175	Oct 12, 2022 (156)
60	EVA	ss5832307946	Oct 12, 2022 (156)
61	EVA	ss5849014637	Oct 12, 2022 (156)
62	EVA	ss5909286990	Oct 12, 2022 (156)
63	EVA	ss5937896466	Oct 12, 2022 (156)
64	EVA	ss5979971641	Oct 12, 2022 (156)
65	1000Genomes	NC_000001.10 - 93119410	Oct 11, 2018 (152)
66	1000Genomes_30x	NC_000001.11 - 92653853	Oct 12, 2022 (156)
67	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 93119410	Oct 11, 2018 (152)
68	Genetic variation in the Estonian population	NC_000001.10 - 93119410	Oct 11, 2018 (152)
69	The Danish reference pan genome	NC_000001.10 - 93119410	Apr 25, 2020 (154)
70	gnomAD - Genomes	NC_000001.11 - 92653853	Apr 25, 2021 (155)
71	Genome of the Netherlands Release 5	NC_000001.10 - 93119410	Apr 25, 2020 (154)
72	HapMap	NC_000001.11 - 92653853	Apr 25, 2020 (154)
73	KOREAN population from KRGDB	NC_000001.10 - 93119410	Apr 25, 2020 (154)
74	Korean Genome Project	NC_000001.11 - 92653853	Apr 25, 2020 (154)
75	Northern Sweden	NC_000001.10 - 93119410	Jul 12, 2019 (153)
76	Qatari	NC_000001.10 - 93119410	Apr 25, 2020 (154)
77	SGDP_PRJ	NC_000001.10 - 93119410	Apr 25, 2020 (154)
78	Siberian	NC_000001.10 - 93119410	Apr 25, 2020 (154)
79	8.3KJPN	NC_000001.10 - 93119410	Apr 25, 2021 (155)
80	14KJPN	NC_000001.11 - 92653853	Oct 12, 2022 (156)
81	TopMed	NC_000001.11 - 92653853	Apr 25, 2021 (155)
82	UK 10K study - Twins	NC_000001.10 - 93119410	Oct 11, 2018 (152)
83	A Vietnamese Genetic Variation Database	NC_000001.10 - 93119410	Jul 12, 2019 (153)
84	ALFA	NC_000001.11 - 92653853	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss108414991, ss164790225, ss166850920, ss198778721, ss1584809350, ss2094844636	NC_000001.9:92891997:G:A	NC_000001.11:92653852:G:A	(self)
2678316, 1472642, 1047418, 1609389, 638373, 1625915, 557871, 676099, 1399621, 372991, 3070818, 1472642, 316523, ss218525098, ss230638304, ss554432039, ss648221552, ss975433230, ss1068092250, ss1291921432, ss1425897421, ss1574234176, ss1600715473, ss1643709506, ss1918634169, ss1966809295, ss2019838735, ss2094966671, ss2147856637, ss2624430661, ss2697782291, ss2758094682, ss2987230617, ss3343574599, ss3651439894, ss3655309170, ss3727273006, ss3746517081, ss3783483229, ss3789130296, ss3794003117, ss3826303566, ss3836542172, ss3849382641, ss3894448521, ss5145101511, ss5320373030, ss5505947542, ss5626042323, ss5832307946, ss5937896466, ss5979971641	NC_000001.10:93119409:G:A	NC_000001.11:92653852:G:A	(self)
3440893, 18903631, 126912, 1380581, 4037886, 22580862, 3548921230, ss2164630186, ss3023682124, ss3646720671, ss3687275559, ss3799521354, ss3841949872, ss3945002580, ss4458974527, ss5243162143, ss5444129459, ss5515914958, ss5670200782, ss5800820175, ss5849014637, ss5909286990	NC_000001.11:92653852:G:A	NC_000001.11:92653852:G:A	(self)
ss16394528	NT_028050.13:1317231:G:A	NC_000001.11:92653852:G:A	(self)
ss41352330, ss99228540, ss161284788	NT_032977.9:63091327:G:A	NC_000001.11:92653852:G:A	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs11578098

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs11578098