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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2955587

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr8:8240557 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>G / A>T
Variation Type
SNV Single Nucleotide Variation
Frequency
G=0.380211 (100638/264690, TOPMED)
G=0.375105 (52520/140014, GnomAD)
G=0.42263 (28104/66498, ALFA) (+ 19 more)
A=0.17429 (4925/28258, 14KJPN)
A=0.17237 (2889/16760, 8.3KJPN)
G=0.4180 (2677/6404, 1000G_30x)
G=0.4305 (2156/5008, 1000G)
G=0.4538 (1749/3854, ALSPAC)
G=0.4453 (1651/3708, TWINSUK)
A=0.2038 (597/2930, KOREAN)
A=0.4990 (1038/2080, HGDP_Stanford)
A=0.1905 (349/1832, Korea1K)
G=0.3022 (460/1522, HapMap)
G=0.446 (445/998, GoNL)
G=0.478 (287/600, NorthernSweden)
G=0.341 (182/534, MGP)
A=0.246 (91/370, SGDP_PRJ)
G=0.227 (49/216, Qatari)
A=0.307 (65/212, Vietnamese)
G=0.45 (30/66, Ancient Sardinia)
A=0.22 (10/46, Siberian)
G=0.40 (16/40, GENOME_DK)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
FAM86B3P : Intron Variant
Publications
1 citation
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 66498 A=0.57737 G=0.42263 0.343379 0.188637 0.467984 30
European Sub 53936 A=0.56174 G=0.43826 0.318155 0.194675 0.48717 2
African Sub 4502 A=0.8823 G=0.1177 0.7761 0.01155 0.21235 1
African Others Sub 164 A=0.963 G=0.037 0.926829 0.0 0.073171 0
African American Sub 4338 A=0.8792 G=0.1208 0.770401 0.011987 0.217612 1
Asian Sub 216 A=0.227 G=0.773 0.046296 0.592593 0.361111 0
East Asian Sub 174 A=0.224 G=0.776 0.057471 0.609195 0.333333 0
Other Asian Sub 42 A=0.24 G=0.76 0.0 0.52381 0.47619 1
Latin American 1 Sub 240 A=0.571 G=0.429 0.316667 0.175 0.508333 0
Latin American 2 Sub 1176 A=0.3554 G=0.6446 0.132653 0.421769 0.445578 0
South Asian Sub 4956 A=0.5397 G=0.4603 0.292978 0.213479 0.493543 0
Other Sub 1472 A=0.5740 G=0.4260 0.330163 0.182065 0.487772 0


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 A=0.619789 G=0.380211
gnomAD - Genomes Global Study-wide 140014 A=0.624895 G=0.375105
gnomAD - Genomes European Sub 75804 A=0.53340 G=0.46660
gnomAD - Genomes African Sub 41982 A=0.88209 G=0.11791
gnomAD - Genomes American Sub 13652 A=0.42770 G=0.57230
gnomAD - Genomes Ashkenazi Jewish Sub 3322 A=0.6875 G=0.3125
gnomAD - Genomes East Asian Sub 3112 A=0.2082 G=0.7918
gnomAD - Genomes Other Sub 2142 A=0.5868 G=0.4132
Allele Frequency Aggregator Total Global 66498 A=0.57737 G=0.42263
Allele Frequency Aggregator European Sub 53936 A=0.56174 G=0.43826
Allele Frequency Aggregator South Asian Sub 4956 A=0.5397 G=0.4603
Allele Frequency Aggregator African Sub 4502 A=0.8823 G=0.1177
Allele Frequency Aggregator Other Sub 1472 A=0.5740 G=0.4260
Allele Frequency Aggregator Latin American 2 Sub 1176 A=0.3554 G=0.6446
Allele Frequency Aggregator Latin American 1 Sub 240 A=0.571 G=0.429
Allele Frequency Aggregator Asian Sub 216 A=0.227 G=0.773
14KJPN JAPANESE Study-wide 28258 A=0.17429 G=0.82571
8.3KJPN JAPANESE Study-wide 16760 A=0.17237 G=0.82763
1000Genomes_30x Global Study-wide 6404 A=0.5820 G=0.4180
1000Genomes_30x African Sub 1786 A=0.9513 G=0.0487
1000Genomes_30x Europe Sub 1266 A=0.5829 G=0.4171
1000Genomes_30x South Asian Sub 1202 A=0.5433 G=0.4567
1000Genomes_30x East Asian Sub 1170 A=0.1983 G=0.8017
1000Genomes_30x American Sub 980 A=0.413 G=0.587
1000Genomes Global Study-wide 5008 A=0.5695 G=0.4305
1000Genomes African Sub 1322 A=0.9486 G=0.0514
1000Genomes East Asian Sub 1008 A=0.1895 G=0.8105
1000Genomes Europe Sub 1006 A=0.5706 G=0.4294
1000Genomes South Asian Sub 978 A=0.553 G=0.447
1000Genomes American Sub 694 A=0.421 G=0.579
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 A=0.5462 G=0.4538
UK 10K study - Twins TWIN COHORT Study-wide 3708 A=0.5547 G=0.4453
KOREAN population from KRGDB KOREAN Study-wide 2930 A=0.2038 G=0.7962, T=0.0000
HGDP-CEPH-db Supplement 1 Global Study-wide 2080 A=0.4990 G=0.5010
HGDP-CEPH-db Supplement 1 Est_Asia Sub 470 A=0.223 G=0.777
HGDP-CEPH-db Supplement 1 Central_South_Asia Sub 414 A=0.575 G=0.425
HGDP-CEPH-db Supplement 1 Middle_Est Sub 350 A=0.706 G=0.294
HGDP-CEPH-db Supplement 1 Europe Sub 316 A=0.592 G=0.408
HGDP-CEPH-db Supplement 1 Africa Sub 242 A=0.917 G=0.083
HGDP-CEPH-db Supplement 1 America Sub 216 A=0.009 G=0.991
HGDP-CEPH-db Supplement 1 Oceania Sub 72 A=0.51 G=0.49
Korean Genome Project KOREAN Study-wide 1832 A=0.1905 G=0.8095
HapMap Global Study-wide 1522 A=0.6978 G=0.3022
HapMap African Sub 688 A=0.874 G=0.126
HapMap American Sub 488 A=0.676 G=0.324
HapMap Europe Sub 176 A=0.585 G=0.415
HapMap Asian Sub 170 A=0.165 G=0.835
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 A=0.554 G=0.446
Northern Sweden ACPOP Study-wide 600 A=0.522 G=0.478
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 A=0.659 G=0.341
SGDP_PRJ Global Study-wide 370 A=0.246 G=0.754
Qatari Global Study-wide 216 A=0.773 G=0.227
A Vietnamese Genetic Variation Database Global Study-wide 212 A=0.307 G=0.693
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 66 A=0.55 G=0.45
Siberian Global Study-wide 46 A=0.22 G=0.78
The Danish reference pan genome Danish Study-wide 40 A=0.60 G=0.40
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 8 NC_000008.11:g.8240557A>G
GRCh38.p14 chr 8 NC_000008.11:g.8240557A>T
GRCh37.p13 chr 8 NC_000008.10:g.8098079A>G
GRCh37.p13 chr 8 NC_000008.10:g.8098079A>T
ALG1L13P pseudogene NG_044407.1:g.4211T>C
ALG1L13P pseudogene NG_044407.1:g.4211T>A
GRCh38.p14 chr 8 fix patch HG76_PATCH NW_018654717.1:g.5107308T>C
GRCh38.p14 chr 8 fix patch HG76_PATCH NW_018654717.1:g.5107308T>A
Gene: FAM86B3P, family with sequence similarity 86 member B3, pseudogene (plus strand)
Molecule type Change Amino acid[Codon] SO Term
FAM86B3P transcript variant 2 NR_024361.1:n. N/A Intron Variant
FAM86B3P transcript variant 1 NR_024362.1:n. N/A Genic Downstream Transcript Variant
FAM86B3P transcript variant 3 NR_024363.1:n. N/A Genic Downstream Transcript Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= G T
GRCh38.p14 chr 8 NC_000008.11:g.8240557= NC_000008.11:g.8240557A>G NC_000008.11:g.8240557A>T
GRCh37.p13 chr 8 NC_000008.10:g.8098079= NC_000008.10:g.8098079A>G NC_000008.10:g.8098079A>T
ALG1L13P pseudogene NG_044407.1:g.4211= NG_044407.1:g.4211T>C NG_044407.1:g.4211T>A
GRCh38.p14 chr 8 fix patch HG76_PATCH NW_018654717.1:g.5107308= NW_018654717.1:g.5107308T>C NW_018654717.1:g.5107308T>A
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

98 SubSNP, 22 Frequency submissions
No Submitter Submission ID Date (Build)
1 SC_JCM ss4165717 Nov 05, 2001 (101)
2 WI_SSAHASNP ss11923920 Jul 11, 2003 (116)
3 ILLUMINA ss66543805 Nov 29, 2006 (127)
4 ILLUMINA ss67284979 Dec 01, 2006 (130)
5 ILLUMINA ss67687651 Dec 01, 2006 (130)
6 ILLUMINA ss70763511 May 26, 2008 (130)
7 ILLUMINA ss71337732 May 16, 2007 (127)
8 ILLUMINA ss75806153 Dec 07, 2007 (129)
9 ILLUMINA ss79154936 Dec 16, 2007 (130)
10 KRIBB_YJKIM ss84129438 Dec 16, 2007 (130)
11 BCMHGSC_JDW ss93827211 Mar 25, 2008 (129)
12 HUMANGENOME_JCVI ss98045145 Feb 06, 2009 (130)
13 BGI ss104499682 Dec 01, 2009 (131)
14 1000GENOMES ss112785355 Jan 25, 2009 (130)
15 ILLUMINA ss122149894 Dec 01, 2009 (131)
16 ENSEMBL ss139729506 Dec 01, 2009 (131)
17 ENSEMBL ss143230551 Dec 01, 2009 (131)
18 ILLUMINA ss154248141 Dec 01, 2009 (131)
19 GMI ss155958553 Dec 01, 2009 (131)
20 ILLUMINA ss159425050 Dec 01, 2009 (131)
21 COMPLETE_GENOMICS ss166165479 Jul 04, 2010 (132)
22 ILLUMINA ss171495717 Jul 04, 2010 (132)
23 ILLUMINA ss173539951 Jul 04, 2010 (132)
24 1000GENOMES ss234299604 Jul 15, 2010 (132)
25 1000GENOMES ss241186734 Jul 15, 2010 (132)
26 BL ss254061786 May 09, 2011 (134)
27 GMI ss279671610 May 04, 2012 (137)
28 GMI ss285781990 Apr 25, 2013 (138)
29 PJP ss294138397 May 09, 2011 (134)
30 ILLUMINA ss537152087 Sep 08, 2015 (146)
31 TISHKOFF ss560515626 Apr 25, 2013 (138)
32 SSMP ss654946172 Apr 25, 2013 (138)
33 ILLUMINA ss825485454 Apr 01, 2015 (144)
34 ILLUMINA ss832936680 Jul 13, 2019 (153)
35 EVA-GONL ss985142465 Aug 21, 2014 (142)
36 JMKIDD_LAB ss1075235697 Aug 21, 2014 (142)
37 1000GENOMES ss1328423679 Aug 21, 2014 (142)
38 DDI ss1431397191 Apr 01, 2015 (144)
39 EVA_GENOME_DK ss1582537664 Apr 01, 2015 (144)
40 EVA_DECODE ss1594728607 Apr 01, 2015 (144)
41 EVA_UK10K_ALSPAC ss1619875092 Apr 01, 2015 (144)
42 EVA_UK10K_TWINSUK ss1662869125 Apr 01, 2015 (144)
43 EVA_MGP ss1711191249 Apr 01, 2015 (144)
44 EVA_SVP ss1713011177 Apr 01, 2015 (144)
45 HAMMER_LAB ss1805376074 Sep 08, 2015 (146)
46 WEILL_CORNELL_DGM ss1928426385 Feb 12, 2016 (147)
47 ILLUMINA ss1959083537 Feb 12, 2016 (147)
48 GENOMED ss1970896223 Jul 19, 2016 (147)
49 JJLAB ss2024904766 Sep 14, 2016 (149)
50 ILLUMINA ss2094832640 Dec 20, 2016 (150)
51 ILLUMINA ss2095205350 Dec 20, 2016 (150)
52 USC_VALOUEV ss2153130260 Dec 20, 2016 (150)
53 SYSTEMSBIOZJU ss2626939731 Nov 08, 2017 (151)
54 GRF ss2708883131 Nov 08, 2017 (151)
55 GNOMAD ss2862747621 Nov 08, 2017 (151)
56 SWEGEN ss3002597354 Nov 08, 2017 (151)
57 ILLUMINA ss3022814723 Nov 08, 2017 (151)
58 BIOINF_KMB_FNS_UNIBA ss3026241674 Nov 08, 2017 (151)
59 CSHL ss3348017696 Nov 08, 2017 (151)
60 ILLUMINA ss3629986312 Oct 12, 2018 (152)
61 ILLUMINA ss3638741340 Oct 12, 2018 (152)
62 ILLUMINA ss3639372502 Oct 12, 2018 (152)
63 ILLUMINA ss3639715230 Oct 12, 2018 (152)
64 ILLUMINA ss3643673884 Oct 12, 2018 (152)
65 OMUKHERJEE_ADBS ss3646370820 Oct 12, 2018 (152)
66 URBANLAB ss3648836819 Oct 12, 2018 (152)
67 ILLUMINA ss3653351872 Oct 12, 2018 (152)
68 EVA_DECODE ss3721322832 Jul 13, 2019 (153)
69 ILLUMINA ss3726510353 Jul 13, 2019 (153)
70 ACPOP ss3735358010 Jul 13, 2019 (153)
71 EVA ss3767563327 Jul 13, 2019 (153)
72 PACBIO ss3786050431 Jul 13, 2019 (153)
73 PACBIO ss3791320299 Jul 13, 2019 (153)
74 PACBIO ss3796201344 Jul 13, 2019 (153)
75 KHV_HUMAN_GENOMES ss3810725823 Jul 13, 2019 (153)
76 EVA ss3830988110 Apr 26, 2020 (154)
77 EVA ss3838999517 Apr 26, 2020 (154)
78 EVA ss3844458517 Apr 26, 2020 (154)
79 HGDP ss3847901925 Apr 26, 2020 (154)
80 SGDP_PRJ ss3869163464 Apr 26, 2020 (154)
81 KRGDB ss3916578923 Apr 26, 2020 (154)
82 KOGIC ss3963172745 Apr 26, 2020 (154)
83 EVA ss3985340423 Apr 26, 2021 (155)
84 EVA ss4017374091 Apr 26, 2021 (155)
85 TOPMED ss4774160345 Apr 26, 2021 (155)
86 TOMMO_GENOMICS ss5187107306 Apr 26, 2021 (155)
87 1000G_HIGH_COVERAGE ss5275904762 Oct 13, 2022 (156)
88 EVA ss5378869941 Oct 13, 2022 (156)
89 HUGCELL_USP ss5472604811 Oct 13, 2022 (156)
90 1000G_HIGH_COVERAGE ss5565608480 Oct 13, 2022 (156)
91 SANFORD_IMAGENETICS ss5644670786 Oct 13, 2022 (156)
92 TOMMO_GENOMICS ss5728574190 Oct 13, 2022 (156)
93 YY_MCH ss5809402989 Oct 13, 2022 (156)
94 EVA ss5830056163 Oct 13, 2022 (156)
95 EVA ss5856233010 Oct 13, 2022 (156)
96 EVA ss5887542340 Oct 13, 2022 (156)
97 EVA ss5973851171 Oct 13, 2022 (156)
98 EVA ss5981247752 Oct 13, 2022 (156)
99 1000Genomes NC_000008.10 - 8098079 Oct 12, 2018 (152)
100 1000Genomes_30x NC_000008.11 - 8240557 Oct 13, 2022 (156)
101 The Avon Longitudinal Study of Parents and Children NC_000008.10 - 8098079 Oct 12, 2018 (152)
102 The Danish reference pan genome NC_000008.10 - 8098079 Apr 26, 2020 (154)
103 gnomAD - Genomes NC_000008.11 - 8240557 Apr 26, 2021 (155)
104 Genome of the Netherlands Release 5 NC_000008.10 - 8098079 Apr 26, 2020 (154)
105 HGDP-CEPH-db Supplement 1 NC_000008.9 - 8135489 Apr 26, 2020 (154)
106 HapMap NC_000008.11 - 8240557 Apr 26, 2020 (154)
107 KOREAN population from KRGDB NC_000008.10 - 8098079 Apr 26, 2020 (154)
108 Korean Genome Project NC_000008.11 - 8240557 Apr 26, 2020 (154)
109 Medical Genome Project healthy controls from Spanish population NC_000008.10 - 8098079 Apr 26, 2020 (154)
110 Northern Sweden NC_000008.10 - 8098079 Jul 13, 2019 (153)
111 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000008.10 - 8098079 Apr 26, 2021 (155)
112 Qatari NC_000008.10 - 8098079 Apr 26, 2020 (154)
113 SGDP_PRJ NC_000008.10 - 8098079 Apr 26, 2020 (154)
114 Siberian NC_000008.10 - 8098079 Apr 26, 2020 (154)
115 8.3KJPN NC_000008.10 - 8098079 Apr 26, 2021 (155)
116 14KJPN NC_000008.11 - 8240557 Oct 13, 2022 (156)
117 TopMed NC_000008.11 - 8240557 Apr 26, 2021 (155)
118 UK 10K study - Twins NC_000008.10 - 8098079 Oct 12, 2018 (152)
119 A Vietnamese Genetic Variation Database NC_000008.10 - 8098079 Jul 13, 2019 (153)
120 ALFA NC_000008.11 - 8240557 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs41474246 May 26, 2008 (130)
rs61074232 May 26, 2008 (130)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
579817, ss93827211, ss112785355, ss166165479, ss254061786, ss279671610, ss285781990, ss294138397, ss825485454, ss1594728607, ss1713011177, ss3639372502, ss3639715230, ss3643673884, ss3847901925 NC_000008.9:8135488:A:G NC_000008.11:8240556:A:G (self)
40506785, 22519350, 8702602, 10059873, 23756317, 307009, 8642875, 566350, 10468315, 21180444, 5646614, 45076613, 22519350, 5016958, ss234299604, ss241186734, ss537152087, ss560515626, ss654946172, ss832936680, ss985142465, ss1075235697, ss1328423679, ss1431397191, ss1582537664, ss1619875092, ss1662869125, ss1711191249, ss1805376074, ss1928426385, ss1959083537, ss1970896223, ss2024904766, ss2094832640, ss2095205350, ss2153130260, ss2626939731, ss2708883131, ss2862747621, ss3002597354, ss3022814723, ss3348017696, ss3629986312, ss3638741340, ss3646370820, ss3653351872, ss3735358010, ss3767563327, ss3786050431, ss3791320299, ss3796201344, ss3830988110, ss3838999517, ss3869163464, ss3916578923, ss3985340423, ss4017374091, ss5187107306, ss5378869941, ss5644670786, ss5830056163, ss5973851171, ss5981247752 NC_000008.10:8098078:A:G NC_000008.11:8240556:A:G (self)
53134415, 285772929, 3555244, 19550746, 62411294, 611537905, 1669034271, ss3026241674, ss3648836819, ss3721322832, ss3726510353, ss3810725823, ss3844458517, ss3963172745, ss4774160345, ss5275904762, ss5472604811, ss5565608480, ss5728574190, ss5809402989, ss5856233010, ss5887542340 NC_000008.11:8240556:A:G NC_000008.11:8240556:A:G (self)
ss11923920 NT_077531.2:408111:A:G NC_000008.11:8240556:A:G (self)
ss4165717, ss66543805, ss67284979, ss67687651, ss70763511, ss71337732, ss75806153, ss79154936, ss84129438, ss98045145, ss104499682, ss122149894, ss139729506, ss143230551, ss154248141, ss155958553, ss159425050, ss171495717, ss173539951 NT_077531.4:573429:A:G NC_000008.11:8240556:A:G (self)
23756317, ss3916578923 NC_000008.10:8098078:A:T NC_000008.11:8240556:A:T (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

1 citation for rs2955587
PMID Title Author Year Journal
22590501 European American stratification in ovarian cancer case control data: the utility of genome-wide data for inferring ancestry. Raska P et al. 2012 PloS one
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d