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| Status |
Public on Jan 23, 2015 |
| Title |
Expression profiling of breast cancer samples from Institut Curie (Maire cohort) --Affy CDF |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Transcriptome analysis of 130 breast cancer samples (41 TNBC ; 30 Her2 ; 30 Luminal B and 29 Luminal A), 11 normal breast tissue samples and 14 TNBC cell lines.
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| Overall design |
This dataset contains 178 arrays. 153 arrays were used to analyze 130 unique breast cancer samples from as many patients and 23 technical duplicates. In addition 11 “Normal” samples from healthy breast tissue obtained from mammoplasty are included, as well as a collection of 14 breast cancer cell lines. Data production involved different array batches and hybridation series which were accounted for in the pre-processing of the data.
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| Contributor(s) |
Dubois T |
| Citation(s) |
25848952, 23700430, 23144294 |
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| Submission date |
Jan 22, 2015 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Thierry Dubois |
| E-mail(s) |
[email protected]
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| Organization name |
Institut Curie
|
| Department |
Recherche Center
|
| Lab |
Breast Cancer Biology Group
|
| Street address |
26 rue d’Ulm
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| City |
PARIS |
| ZIP/Postal code |
75005 |
| Country |
France |
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| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
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| Samples (178)
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| GSM1588973 |
Her2, TUM002_repB |
| GSM1588974 |
TNBC, TUM003 |
| GSM1588975 |
TNBC, TUM004 |
| GSM1588976 |
TNBC, TUM005 |
| GSM1588977 |
TNBC, TUM006_repA |
| GSM1588978 |
TNBC, TUM006_repB |
| GSM1588979 |
TNBC, TUM007 |
| GSM1588980 |
TNBC, TUM008 |
| GSM1588981 |
Her2, TUM009 |
| GSM1588982 |
TNBC, TUM010_repA |
| GSM1588983 |
TNBC, TUM010_repB |
| GSM1588984 |
TNBC, TUM011 |
| GSM1588985 |
TNBC, TUM012 |
| GSM1588986 |
TNBC, TUM013_repA |
| GSM1588987 |
TNBC, TUM013_repB |
| GSM1588988 |
TNBC, TUM014 |
| GSM1588989 |
Her2, TUM015_repA |
| GSM1588990 |
Her2, TUM015_repB |
| GSM1588991 |
Her2, TUM016_repA |
| GSM1588992 |
Her2, TUM016_repB |
| GSM1588993 |
TNBC, TUM017_repA |
| GSM1588994 |
TNBC, TUM017_repB |
| GSM1588995 |
TNBC, TUM018_repA |
| GSM1588996 |
TNBC, TUM018_repB |
| GSM1588997 |
Her2, TUM019 |
| GSM1588998 |
Her2, TUM020_repA |
| GSM1588999 |
Her2, TUM020_repB |
| GSM1589000 |
Her2, TUM021_repA |
| GSM1589001 |
Her2, TUM021_repB |
| GSM1589002 |
Her2, TUM022 |
| GSM1589003 |
TNBC, TUM023 |
| GSM1589004 |
TNBC, TUM024 |
| GSM1589005 |
TNBC, TUM025 |
| GSM1589006 |
Her2, TUM026_repA |
| GSM1589007 |
Her2, TUM026_repB |
| GSM1589008 |
Her2, TUM027 |
| GSM1589009 |
TNBC, TUM028_repA |
| GSM1589010 |
TNBC, TUM028_repB |
| GSM1589011 |
TNBC, TUM029 |
| GSM1589012 |
TNBC, TUM030 |
| GSM1589013 |
Her2, TUM031 |
| GSM1589014 |
TNBC, TUM032_repA |
| GSM1589015 |
TNBC, TUM032_repB |
| GSM1589016 |
TNBC, TUM033 |
| GSM1589017 |
TNBC, TUM034 |
| GSM1589018 |
Her2, TUM035_repA |
| GSM1589019 |
Her2, TUM035_repB |
| GSM1589020 |
Her2, TUM036 |
| GSM1589021 |
Her2, TUM037 |
| GSM1589022 |
Her2, TUM038_repA |
| GSM1589023 |
Her2, TUM038_repB |
| GSM1589024 |
TNBC, TUM039 |
| GSM1589025 |
Her2, TUM040 |
| GSM1589026 |
Her2, TUM041 |
| GSM1589027 |
Her2, TUM042 |
| GSM1589028 |
TNBC, TUM043_repA |
| GSM1589029 |
TNBC, TUM043_repB |
| GSM1589030 |
Her2, TUM044 |
| GSM1589031 |
TNBC, TUM045_repA |
| GSM1589032 |
TNBC, TUM045_repB |
| GSM1589033 |
Her2, TUM046 |
| GSM1589034 |
Her2, TUM047 |
| GSM1589035 |
TNBC, TUM048_repA |
| GSM1589036 |
TNBC, TUM048_repB |
| GSM1589037 |
TNBC, TUM049 |
| GSM1589038 |
TNBC, TUM050 |
| GSM1589039 |
TNBC, TUM051_repA |
| GSM1589040 |
TNBC, TUM051_repB |
| GSM1589041 |
TNBC, TUM052 |
| GSM1589042 |
TNBC, TUM053 |
| GSM1589043 |
TNBC, TUM054 |
| GSM1589044 |
Her2, TUM055 |
| GSM1589045 |
TNBC, TUM056 |
| GSM1589046 |
Her2, TUM057 |
| GSM1589047 |
Her2, TUM058_repA |
| GSM1589048 |
Her2, TUM058_repB |
| GSM1589049 |
Her2, TUM059 |
| GSM1589050 |
Her2, TUM060 |
| GSM1589051 |
Her2, TUM061 |
| GSM1589052 |
Her2, TUM062 |
| GSM1589053 |
Her2, TUM063 |
| GSM1589054 |
TNBC, TUM064_repA |
| GSM1589055 |
TNBC, TUM064_repB |
| GSM1589056 |
TNBC, TUM065 |
| GSM1589057 |
Her2, TUM066 |
| GSM1589058 |
TNBC, TUM067_repA |
| GSM1589059 |
TNBC, TUM067_repB |
| GSM1589060 |
TNBC, TUM068 |
| GSM1589061 |
TNBC, TUM069 |
| GSM1589062 |
TNBC, TUM070 |
| GSM1589063 |
TNBC, TUM071 |
| GSM1589064 |
Luminal A, TUM072 |
| GSM1589065 |
Luminal A, TUM073 |
| GSM1589066 |
Luminal A, TUM074 |
| GSM1589067 |
Luminal A, TUM075 |
| GSM1589068 |
Luminal A, TUM076 |
| GSM1589069 |
Luminal A, TUM077 |
| GSM1589070 |
Luminal A, TUM078 |
| GSM1589071 |
Luminal A, TUM079 |
| GSM1589072 |
Luminal A, TUM080 |
| GSM1589073 |
Luminal A, TUM081 |
| GSM1589074 |
Luminal A, TUM082 |
| GSM1589075 |
Luminal A, TUM083 |
| GSM1589076 |
Luminal A, TUM084 |
| GSM1589077 |
Luminal A, TUM085 |
| GSM1589078 |
Luminal A, TUM086 |
| GSM1589079 |
Luminal A, TUM087 |
| GSM1589080 |
Luminal A, TUM088 |
| GSM1589081 |
Luminal A, TUM089 |
| GSM1589082 |
Luminal A, TUM090 |
| GSM1589083 |
Luminal A, TUM091 |
| GSM1589084 |
Luminal A, TUM092 |
| GSM1589085 |
Luminal A, TUM093 |
| GSM1589086 |
Luminal A, TUM094 |
| GSM1589087 |
Luminal A, TUM095 |
| GSM1589088 |
Luminal A, TUM096 |
| GSM1589089 |
Luminal A, TUM097 |
| GSM1589090 |
Luminal A, TUM098 |
| GSM1589091 |
Luminal A, TUM099 |
| GSM1589092 |
Luminal A, TUM100 |
| GSM1589093 |
Luminal B, TUM101 |
| GSM1589094 |
Luminal B, TUM102 |
| GSM1589095 |
Luminal B, TUM103 |
| GSM1589097 |
Luminal B, TUM104 |
| GSM1589098 |
Luminal B, TUM105 |
| GSM1589099 |
Luminal B, TUM106 |
| GSM1589101 |
Luminal B, TUM107 |
| GSM1589103 |
Luminal B, TUM108 |
| GSM1589105 |
Luminal B, TUM109 |
| GSM1589107 |
Luminal B, TUM110 |
| GSM1589109 |
Luminal B, TUM111 |
| GSM1589110 |
Luminal B, TUM112 |
| GSM1589111 |
Luminal B, TUM113 |
| GSM1589112 |
Luminal B, TUM114 |
| GSM1589113 |
Luminal B, TUM115 |
| GSM1589114 |
Luminal B, TUM116 |
| GSM1589115 |
Luminal B, TUM117 |
| GSM1589116 |
Luminal B, TUM118 |
| GSM1589117 |
Luminal B, TUM119 |
| GSM1589118 |
Luminal B, TUM120 |
| GSM1589119 |
Luminal B, TUM121 |
| GSM1589120 |
Luminal B, TUM122 |
| GSM1589121 |
Luminal B, TUM123 |
| GSM1589122 |
Luminal B, TUM124 |
| GSM1589123 |
Luminal B, TUM125 |
| GSM1589124 |
Luminal B, TUM126 |
| GSM1589125 |
Luminal B, TUM127 |
| GSM1589126 |
Luminal B, TUM128 |
| GSM1589127 |
Luminal B, TUM129 |
| GSM1589128 |
Luminal B, TUM130 |
| GSM1589129 |
CellLine, 184B5 |
| GSM1589130 |
Healthy, H3 |
| GSM1589131 |
CellLine, MDA-MB-436 |
| GSM1589132 |
Healthy, H13 |
| GSM1589133 |
CellLine, HCC1143 |
| GSM1589134 |
CellLine, HCC1187 |
| GSM1589135 |
Healthy, H9 |
| GSM1589136 |
Healthy, H10 |
| GSM1589137 |
CellLine, BT20 |
| GSM1589138 |
CellLine, HCC1937 |
| GSM1589139 |
Healthy, H18 |
| GSM1589140 |
CellLine, MCF-12A |
| GSM1589141 |
CellLine, HCC38 |
| GSM1589142 |
Healthy, H12 |
| GSM1589143 |
CellLine, Hs 578T |
| GSM1589144 |
Healthy, H11 |
| GSM1589145 |
Healthy, H15 |
| GSM1589146 |
CellLine, MDA-MB-468 |
| GSM1589147 |
CellLine, BT-549 |
| GSM1589148 |
Healthy, H4 |
| GSM1589149 |
CellLine, HCC70 |
| GSM1589150 |
Healthy, H14 |
| GSM1589151 |
Healthy, H5 |
| GSM1589152 |
CellLine, MDA-MB-157 |
| GSM1589153 |
CellLine, MDA-MB-231 |
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| This SubSeries is part of SuperSeries: |
| GSE65216 |
Expression profiling of breast cancer samples from Institut Curie (Maire cohort) |
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| Relations |
| BioProject |
PRJNA273413 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE65194_RAW.tar |
833.1 Mb |
(http)(custom) |
TAR (of CEL) |
| GSE65194_clinical_data_update.txt.gz |
6.7 Kb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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