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Clec1b C-type lectin domain family 1 member B [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101825191, updated on 8-Mar-2024

Summary

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Gene symbol
Clec1b
Gene description
C-type lectin domain family 1 member B
See related
EnsemblRapid:ENSMAUG00000017334
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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See Clec1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429187.1 (548033..555280)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801858.1 (724691..743383, complement)

NW_024429187.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 12 member A Neighboring gene C-type lectin domain family 12 member B Neighboring gene C-type lectin domain containing 9A Neighboring gene C-type lectin domain family 1 member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters. Ying B, et al. Virology, 2015 Nov. PMID 26319212, Free PMC Article
  2. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
C-type lectin domain family 1 member B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429187.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    548033..555280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013126027.3 → XP_012981481.1  C-type lectin domain family 1 member B isoform X2

    UniProtKB/TrEMBL
    A0A1U8CPN1
    Conserved Domains (1) summary
    cd03593
    Location:101 → 217
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  2. XM_005087134.4 → XP_005087191.1  C-type lectin domain family 1 member B isoform X1

    UniProtKB/TrEMBL
    A0A1U7R464
    Related
    ENSMAUP00000018894.1, ENSMAUT00000022861.2
    Conserved Domains (1) summary
    cd03593
    Location:102 → 218
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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