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ORCIDChristian J. Stoeckert Jr.
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- affiliation: University of Pennsylvania, Philadelphia, USA
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2020 – today
- 2022
[j43]Beatrice Amos, Cristina Aurrecoechea, Matthieu Barba
, Ana Barreto, Evelina Y. Basenko, Wojciech Bazant, Robert Belnap, Ann S. Blevins, Ulrike Böhme, John Brestelli, Brian P. Brunk, Mark J. Caddick, Danielle Callan, Lahcen I. Campbell, Mikkel B. Christensen, George K. Christophides, Kathryn Crouch, Kristina Davis, Jeremy D. DeBarry, Ryan Doherty, Yikun Duan, Michael Dunn, Dave Falke, Steve Fisher, Paul Flicek, Brett Fox, Bindu Gajria, Gloria I. Giraldo-Calderón, Omar S. Harb, Elizabeth Harper, Christiane Hertz-Fowler, Mark J. Hickman, Connor Howington, Sufen Hu, Jay C. Humphrey, John Iodice, Andrew R. Jones, John Judkins, Sarah A. Kelly, Jessica C. Kissinger, Dae Kun Kwon, Kristopher Lamoureux, Daniel Lawson, Wei Li, Kallie Lies, Disha Lodha, Jamie Long, Robert M. MacCallum, Gareth Maslen, Mary Ann McDowell, Jaroslaw Nabrzyski, David S. Roos, Samuel S. C. Rund, Stephanie wever Schulman, Achchuthan Shanmugasundram, Vasily Sitnik, Drew Spruill, David Starns, Christian J. Stoeckert Jr., Sheena Shah Tomko, Haiming Wang, Susanne Warrenfeltz, Robert Wieck, Paul A. Wilkinson, Lin Xu, Jie Zheng:
VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center. Nucleic Acids Res. 50(D1): 898-911 (2022)- 2021
- [j42]Rebecca C. Jackson, Nicolas Matentzoglu, James A. Overton, Randi Vita, James P. Balhoff, Pier Luigi Buttigieg, Seth Carbon, Mélanie Courtot, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Nomi L. Harris, Melissa A. Haendel, Suzanna E. Lewis, Darren A. Natale, David Osumi-Sutherland, Alan Ruttenberg, Lynn M. Schriml, Barry Smith, Christian J. Stoeckert Jr., Nicole A. Vasilevsky, Ramona L. Walls, Jie Zheng, Christopher J. Mungall, Bjoern Peters:
OBO Foundry in 2021: operationalizing open data principles to evaluate ontologies. Database J. Biol. Databases Curation 2021 (2021) - [j41]Randi Vita, Jie Zheng, Rebecca C. Jackson, Damion M. Dooley, James A. Overton, Mark A. Miller, Daniel C. Berrios, Richard H. Scheuermann, Yongqun He, Hande Küçük-McGinty, Mathias Brochhausen, Aisyah Yu Lin, Sagar B. Jain, Marcus C. Chibucos, John Judkins, Michelle G. Giglio, Irene Y. Feng, Gully Burns, Matthew H. Brush, Bjoern Peters, Christian J. Stoeckert Jr.:
Standardization of assay representation in the Ontology for Biomedical Investigations. Database J. Biol. Databases Curation 2021 (2021) - 2020
- [c20]Hayden Freedman, Mark A. Miller, Heather Williams, Christian J. Stoeckert Jr.:
Scaling and Querying a Semantically Rich, Electronic Healthcare Graph. ICBO/ODLS 2020: 1-11 - [c19]Mark A. Miller, Hayden Freedman, Christian J. Stoeckert Jr.:
A Robust, Self-Training Classifier for Medication Strings, with Quantitative and Semantic Confidence Metrics. ICBO/ODLS 2020: 1-12
2010 – 2019
- 2019
- [c18]Jie Zheng, John Judkins, Christian J. Stoeckert Jr.:
OWLmaker: An Application for Generating OWL Files from Tabular Text. ICBO 2019: 1-3 - [c17]Sarah Bost, Niina Eklund, Kaisa Silander, Jie Zheng, Christian J. Stoeckert Jr., Mathias Brochhausen:
Mapping Data Annotated with the Minimum Information About BIobank data Sharing (MIABIS) 2.0 to the Ontology for Biobanking (OBIB). ICBO 2019: 1-2 - [c16]Yongqun He, Edison Ong, Jennifer Schaub, Frederick Dowd, John F. O'Toole, Anastasios Siapos, Christian G. Reich, Sarah Seager, Ling Wang, Hong Yu, Jie Zheng, Christian J. Stoeckert Jr., Xiaolin Yang, Sheng Yang, Becky Steck, Christopher Park, Laura Barisoni, Matthias Kretzler, Jonathan Himmelfarb, Ravi Iyengar, Sean D. Mooney:
OPMI: the Ontology of Precision Medicine and Investigation and its Support for Clinical Data and Metadata Representation and Analysis. ICBO 2019: 1-10 - [c15]Mark A. Miller, Christian J. Stoeckert Jr.:
A Collaborative, Realism-Based, Electronic Healthcare Graph: Public Data, Common Data Models, and Practical Instantiation. ICBO 2019: 1-10 - 2018
- [j40]Francislon S. Oliveira, John Brestelli, Shon Cade, Jie Zheng, John Iodice, Steve Fischer, Cristina Aurrecoechea, Jessica C. Kissinger, Brian P. Brunk, Christian J. Stoeckert Jr., Gabriel R. Fernandes, David S. Roos, Daniel P. Beiting:
MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments. Nucleic Acids Res. 46(Database-Issue): D684-D691 (2018) - [c14]Anna Maria Masci, Shannon McCall, Alessandro Racioppi, Helena Judge Ellis, Jihad S. Obeid, Barry Smith, Christian J. Stoeckert Jr., Jie Zheng:
Standardization of the Histopathology Cancer Report: An Ontological Approach. ICBO 2018 - [c13]Christian J. Stoeckert Jr., David L. Birtwell, Hayden Freedman, Mark A. Miller, Heather Williams:
Transforming and Unifying Research with Biomedical Ontologies: The Penn TURBO Project. ICBO 2018 - 2017
- [j39]Cristina Aurrecoechea, Ana Barreto, Evelina Y. Basenko, John Brestelli, Brian P. Brunk, Shon Cade, Kathryn Crouch, Ryan Doherty, Dave Falke, Steve Fischer, Bindu Gajria, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Sufen Hu, John Iodice, Jessica C. Kissinger, Cris Lawrence, Wei Li, Deborah F. Pinney, Jane A. Pulman, David S. Roos, Achchuthan Shanmugasundram, Fatima Silva-Franco, Sascha Steinbiss, Christian J. Stoeckert Jr., Drew Spruill, Haiming Wang, Susanne Warrenfeltz, Jie Zheng:
EuPathDB: the eukaryotic pathogen genomics database resource. Nucleic Acids Res. 45(Database-Issue): D581-D591 (2017) - 2016
- [j38]Mathias Brochhausen, Jie Zheng, David L. Birtwell, Heather Williams, Anna Maria Masci, Helena Judge Ellis, Christian J. Stoeckert Jr.:
OBIB-a novel ontology for biobanking. J. Biomed. Semant. 7: 23 (2016) - [c12]Jie Zheng, Jashon Cade, Brian P. Brunk, David S. Roos, Christian J. Stoeckert Jr., San James, Emmanuel Arinaitwe, Bryan Greenhouse, Grant Dorsey, Steven Sullivan, Jane M. Carlton, Gabriel Carrasco-Escobar, Dionicia Gamboa, Paula Maguina-Mercedes, Joseph Vinetz:
Malaria Study Data Integration and Information Retrieval Based on OBO Foundry Ontologies. ICBO/BioCreative 2016 - 2014
- [j37]Jie Zheng, Zuoshuang Xiang, Christian J. Stoeckert Jr., Yongqun He:
Ontodog: a web-based ontology community view generation tool. Bioinform. 30(9): 1340-1342 (2014) - [j36]Sirarat Sarntivijai, Yu Lin, Zuoshuang Xiang, Terrence F. Meehan, Alexander D. Diehl, Uma D. Vempati, Stephan C. Schürer, Chao Pang, James Malone, Helen E. Parkinson, Yue Liu, Terue Takatsuki, Kaoru Saijo, Hiroshi Masuya, Yukio Nakamura, Matthew H. Brush, Melissa A. Haendel, Jie Zheng, Christian J. Stoeckert Jr., Bjoern Peters, Christopher J. Mungall, Thomas E. Carey, David J. States, Brian D. Athey, Yongqun He:
CLO: The cell line ontology. J. Biomed. Semant. 5: 37 (2014) - 2013
- [j35]Emily Greenfest-Allen, Jeffrey Malik, James Palis, Christian J. Stoeckert Jr.:
Stat and interferon genes identified by network analysis differentially regulate primitive and definitive erythropoiesis. BMC Syst. Biol. 7: 38 (2013) - [j34]Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Shon Cade, Ryan Doherty, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Sufen Hu, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Haiming Wang, Susanne Warrenfeltz:
EuPathDB: The Eukaryotic Pathogen database. Nucleic Acids Res. 41(Database-Issue): 684-691 (2013) - [c11]Jie Zheng, Elisabetta Manduchi, Christian J. Stoeckert Jr.:
Development of an Application Ontology for Beta Cell Genomics Based On the Ontology for Biomedical Investigations. ICBO 2013: 62-67 - [c10]Mélanie Courtot, Jie Zheng, Christian J. Stoeckert Jr., Ryan Remy Brinkman, Alan Ruttenberg:
Diagnostic criteria and clinical guidelines standardization to automate case classification. ICBO 2013: 101-104 - [c9]Matthew H. Brush, Jie Zheng, Yongqun He, Sirarat Sarntivijai, Bjoern Peters, Alexander D. Diehl, Christian J. Stoeckert Jr., Melissa A. Haendel:
Alignment of Cultured Cell Modeling Across OBO Foundry Ontologies: Key Outcomes, Insights. ICBO 2013: 120 - 2012
- [j33]Priti Parikh, Jie Zheng, Flora J. Logan-Klumpler, Christian J. Stoeckert Jr., Christos Louis, Pantelis Topalis, Anna V. Protasio, Amit P. Sheth, Mark Carrington, Matthew Berriman, Satya Sanket Sahoo:
The Ontology for Parasite Lifecycle (OPL): towards a consistent vocabulary of lifecycle stages in parasitic organisms. J. Biomed. Semant. 3: 5 (2012) - [j32]Jason E. Stajich, Todd W. Harris, Brian P. Brunk, John Brestelli, Steve Fischer, Omar S. Harb, Jessica C. Kissinger, Wei Li, Vishal Nayak, Deborah F. Pinney, Christian J. Stoeckert Jr., David S. Roos:
FungiDB: an integrated functional genomics database for fungi. Nucleic Acids Res. 40(Database-Issue): 675-681 (2012) - [c8]Alok Dhamanaskar, Michael E. Cotterell, Jie Zheng, Jessica C. Kissinger, Christian J. Stoeckert Jr., John A. Miller:
Suggestions for Galaxy Workflow Design Using Semantically Annotated Services. FOIS 2012: 29-42 - [c7]Jie Zheng, Zuoshuang Xiang, Christian J. Stoeckert Jr., Yongqun He:
Ontodog: A Web-based Ontology Community View Generator. ICBO 2012 - 2011
- [j31]Steve Fischer, Cristina Aurrecoechea, Brian P. Brunk, Xin Gao, Omar S. Harb, Eileen T. Kraemer, Cary Pennington, Charles Treatman, Jessica C. Kissinger, David S. Roos, Christian J. Stoeckert Jr.:
The strategies WDK: a graphical search interface and web development kit for functional genomics databases. Database J. Biol. Databases Curation 2011 (2011) - [j30]Jie Zheng, Julia Stoyanovich, Elisabetta Manduchi, Junmin Liu, Christian J. Stoeckert Jr.:
AnnotCompute: annotation-based exploration and meta-analysis of genomics experiments. Database J. Biol. Databases Curation 2011 (2011) - [j29]Gregory R. Grant, Michael H. Farkas, Angel D. Pizarro, Nicholas F. Lahens, Jonathan Schug, Brian P. Brunk, Christian J. Stoeckert Jr., John B. Hogenesch, Eric A. Pierce:
Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM). Bioinform. 27(18): 2518-2528 (2011) - [j28]Cristina Aurrecoechea, Ana Barreto, John Brestelli, Brian P. Brunk, Elisabet V. Caler, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Vishal Nayak, Cary Pennington, Deborah F. Pinney, Brian Pitts, David S. Roos, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang:
AmoebaDB and MicrosporidiaDB: functional genomic resources for Amoebozoa and Microsporidia species. Nucleic Acids Res. 39(Database-Issue): 612-619 (2011) - [c6]Chaitanya Guttula, Alok Dhamanaskar, Rui Wang, John A. Miller, Jessica C. Kissinger, Jie Zheng, Christian J. Stoeckert Jr.:
Enriching the Ontology for Biomedical Investigations (OBI) to Improve its Suitability for Web Service Annotations. ICBO 2011 - [c5]Jie Zheng, Omar S. Harb, Christian J. Stoeckert Jr.:
Ontology Driven Data Collection for EuPathDB. ICBO 2011 - 2010
- [j27]Ravi Shankar, Helen E. Parkinson, Tony Burdett, Emma Hastings, Junmin Liu, Michael Miller, Rashmi Srinivasa, Joseph White, Alvis Brazma, Gavin Sherlock, Christian J. Stoeckert Jr., Catherine A. Ball:
Annotare - a tool for annotating high-throughput biomedical investigations and resulting data. Bioinform. 26(19): 2470-2471 (2010) - [j26]Ryan Remy Brinkman, Mélanie Courtot, Dirk Derom, Jennifer Fostel, Yongqun He, Phillip W. Lord, James Malone, Helen E. Parkinson, Björn Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Larisa N. Soldatova, Christian J. Stoeckert Jr., Jessica A. Turner, Jie Zheng, et al.:
Modeling biomedical experimental processes with OBI. J. Biomed. Semant. 1(S-1): S7 (2010) - [j25]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Ryan Thibodeau, Charles Treatman, Haiming Wang:
EuPathDB: a portal to eukaryotic pathogen databases. Nucleic Acids Res. 38(Database-Issue): 415-419 (2010) - [j24]Martin Aslett, Cristina Aurrecoechea, Matthew Berriman, John Brestelli, Brian P. Brunk, Mark Carrington, Daniel P. Depledge, Steve Fischer, Bindu Gajria, Xin Gao, Malcolm J. Gardner, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Christiane Hertz-Fowler, Robin Houston, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, Flora J. Logan, John A. Miller, Siddhartha Mitra, Peter J. Myler, Vishal Nayak, Cary Pennington, Isabelle Phan, Deborah F. Pinney, Gowthaman Ramasamy, Matthew B. Rogers, David S. Roos, Chris Ross, Dhileep Sivam, Deborah F. Smith, Ganesh Srinivasamoorthy, Christian J. Stoeckert Jr., Sandhya Subramanian, Ryan Thibodeau, Adrian Tivey, Charles Treatman, Giles Velarde, Haiming Wang:
TriTrypDB: a functional genomic resource for the Trypanosomatidae. Nucleic Acids Res. 38(Database-Issue): 457-462 (2010)
2000 – 2009
- 2009
- [j23]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jane M. Carlton, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Hilary G. Morrison, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Steven Sullivan, Charles Treatman, Haiming Wang:
GiardiaDB and TrichDB: integrated genomic resources for the eukaryotic protist pathogens Giardia lamblia and Trichomonas vaginalis. Nucleic Acids Res. 37(Database-Issue): 526-530 (2009) - [j22]Cristina Aurrecoechea, John Brestelli, Brian P. Brunk, Jennifer Dommer, Steve Fischer, Bindu Gajria, Xin Gao, Alan R. Gingle, Gregory R. Grant, Omar S. Harb, Mark Heiges, Frank Innamorato, John Iodice, Jessica C. Kissinger, Eileen T. Kraemer, Wei Li, John A. Miller, Vishal Nayak, Cary Pennington, Deborah F. Pinney, David S. Roos, Chris Ross, Christian J. Stoeckert Jr., Charles Treatman, Haiming Wang:
PlasmoDB: a functional genomic database for malaria parasites. Nucleic Acids Res. 37(Database-Issue): 539-543 (2009) - [c4]Ghislain Bidaut, Christian J. Stoeckert Jr.:
Characterization of Unknown Adult Stem Cell Samples by Large Scale Data Integration and Artificial Neural Networks. Pacific Symposium on Biocomputing 2009: 356-367 - 2008
- [j21]Bindu Gajria, Amit Bahl, John Brestelli, Jennifer Dommer, Steve Fischer, Xin Gao, Mark Heiges, John Iodice, Jessica C. Kissinger, Aaron J. Mackey, Deborah F. Pinney, David S. Roos, Christian J. Stoeckert Jr., Haiming Wang, Brian P. Brunk:
ToxoDB: an integrated Toxoplasma gondii database resource. Nucleic Acids Res. 36(Database-Issue): 553-556 (2008) - 2007
- [j20]Cristina Aurrecoechea, Mark Heiges, Haiming Wang, Zhiming Wang, Steve Fischer, Philippa M. Rhodes, John A. Miller, Eileen T. Kraemer, Christian J. Stoeckert Jr., David S. Roos, Jessica C. Kissinger:
ApiDB: integrated resources for the apicomplexan bioinformatics resource center. Nucleic Acids Res. 35(Database-Issue): 427-430 (2007) - [j19]Joan M. Mazzarelli, John Brestelli, Regina K. Gorski, Junmin Liu, Elisabetta Manduchi, Deborah F. Pinney, Jonathan Schug, Peter White, Klaus H. Kaestner, Christian J. Stoeckert Jr.:
EPConDB: a web resource for gene expression related to pancreatic development, beta-cell function and diabetes. Nucleic Acids Res. 35(Database-Issue): 751-755 (2007) - [c3]Jonathan Schug, Max Mintz, Christian J. Stoeckert Jr.:
Data Integration and Pattern-Finding in Biological Sequence with TESS's Annotation Grammar and Extraction Language (AnGEL). DILS 2007: 188-203 - 2006
- [j18]Patricia L. Whetzel, Helen E. Parkinson, Helen C. Causton, Liju Fan, Jennifer Fostel, Gilberto Fragoso, Laurence Game, Mervi Heiskanen, Norman Morrison, Philippe Rocca-Serra, Susanna-Assunta Sansone, Chris F. Taylor, Joseph White, Christian J. Stoeckert Jr.:
The MGED Ontology: a resource for semantics-based description of microarray experiments. Bioinform. 22(7): 866-873 (2006) - [j17]Tim F. Rayner, Philippe Rocca-Serra, Paul T. Spellman, Helen C. Causton, Anna Farne, Ele Holloway, Rafael A. Irizarry, Junmin Liu, Donald Maier, Michael Miller, Kjell Petersen, John Quackenbush, Gavin Sherlock, Christian J. Stoeckert Jr., Joseph White, Patricia L. Whetzel, Farrell Wymore, Helen E. Parkinson, Ugis Sarkans, Catherine A. Ball, Alvis Brazma:
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB. BMC Bioinform. 7: 489 (2006) - [j16]Feng Chen, Aaron J. Mackey, Christian J. Stoeckert Jr., David S. Roos:
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups. Nucleic Acids Res. 34(Database-Issue): 363-368 (2006) - 2005
- [j15]Gregory R. Grant, Junmin Liu, Christian J. Stoeckert Jr.:
A practical false discovery rate approach to identifying patterns of differential expression in microarray data. Bioinform. 21(11): 2684-2690 (2005) - 2004
- [j14]Elisabetta Manduchi, Gregory R. Grant, H. He, Junmin Liu, Matthew D. Mailman, Angel D. Pizarro, Patricia L. Whetzel, Christian J. Stoeckert Jr.:
RAD and the RAD Study-Annotator: an approach to collection, organization and exchange of all relevant information for high-throughput gene expression studies. Bioinform. 20(4): 452-459 (2004) - [j13]Andrew R. Jones, Ela Hunt, Jonathan M. Wastling, Angel D. Pizarro, Christian J. Stoeckert Jr.:
An object model and database for functional genomics. Bioinform. 20(10): 1583-1590 (2004) - [j12]Li Li, Jonathan Crabtree, Steve Fischer, Deborah F. Pinney, Christian J. Stoeckert Jr., L. David Sibley, David S. Roos:
ApiEST-DB: analyzing clustered EST data of the apicomplexan parasites. Nucleic Acids Res. 32(Database-Issue): 326-328 (2004) - 2003
- [j11]Amit Bahl, Brian P. Brunk, Jonathan Crabtree, Martin J. Fraunholz, Bindu Gajria, Gregory R. Grant, Hagai Ginsburg, Dinesh Gupta, Jessica C. Kissinger, Philip Labo, Li Li, Matthew D. Mailman, Arthur J. Milgram, David S. Pearson, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr., Patricia L. Whetzel:
PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data. Nucleic Acids Res. 31(1): 212-215 (2003) - [j10]Christian J. Stoeckert Jr.:
Common Objects: Think Global, Act Local. OMICS 7(1): 103-104 (2003) - 2002
- [j9]Catherine A. Ball, Gavin Sherlock, Helen E. Parkinson, Philippe Rocca-Serra, Catherine Brooksbank, Helen C. Causton, Duccio Cavalieri, Terry Gaasterland, Pascal Hingamp, Frank C. P. Holstege, Martin Ringwald, Paul T. Spellman, Christian J. Stoeckert Jr., Jason E. Stewart, Ronald C. Taylor, Alvis Brazma, John Quackenbush:
An open letter to the scientific journals. Bioinform. 18(11): 1409 (2002) - [j8]Susan B. Davidson, Christian J. Stoeckert Jr.:
In memory of Vadim Aleksandrovich Ratner. Silico Biol. 2(4): 523-524 (2002) - [j7]Amit Bahl, Brian P. Brunk, Ross L. Coppel, Jonathan Crabtree, Sharon J. Diskin, Martin J. Fraunholz, Gregory R. Grant, Dinesh Gupta, Robert L. Huestis, Jessica C. Kissinger, Philip Labo, Li Li, Shannon K. McWeeney, Arthur J. Milgram, David S. Roos, Jonathan Schug, Christian J. Stoeckert Jr.:
PlasmoDB: the Plasmodium genome resource. An integrated database providing tools for accessing, analyzing and mapping expression and sequence data (both finished and unfinished). Nucleic Acids Res. 30(1): 87-90 (2002) - 2001
- [j6]Christian J. Stoeckert Jr., Angel D. Pizarro, Elisabetta Manduchi, M. Gibson, Brian P. Brunk, Jonathan Crabtree, Jonathan Schug, Shai Shen-Orr, G. Christian Overton:
A relational schema for both array-based and SAGE gene expression experiments. Bioinform. 17(4): 300-308 (2001) - [j5]Susan B. Davidson, Jonathan Crabtree, Brian P. Brunk, Jonathan Schug, Val Tannen, G. Christian Overton, Christian J. Stoeckert Jr.:
K2/Kleisli and GUS: Experiments in integrated access to genomic data sources. IBM Syst. J. 40(2): 512-531 (2001) - 2000
- [j4]Elisabetta Manduchi, Gregory R. Grant, Steven E. McKenzie, G. Christian Overton, Saul Surrey, Christian J. Stoeckert Jr.:
Generation of patterns from gene expression data by assigning confidence to differentially expressed genes. Bioinform. 16(8): 685-698 (2000) - [j3]Susan B. Davidson, Christian J. Stoeckert Jr.:
In Memory of Chris Overton. Silico Biol. 1: S27-S28 (2000)
1990 – 1999
- 1999
- [j2]Christian J. Stoeckert Jr., Fidel Salas, Brian P. Brunk, G. Christian Overton:
EpoDB: a prototype database for the analysis of genes expressed during vertebrate erythropoiesis. Nucleic Acids Res. 27(1): 200-203 (1999) - 1998
- [j1]Fidel Salas, Juergen Haas, Brian P. Brunk, Christian J. Stoeckert Jr., G. Christian Overton:
EpoDB: a database of genes expressed during vertebrate erythropoiesis. Nucleic Acids Res. 26(1): 288-289 (1998) - 1996
- [c2]Fidel Salas, G. Christian Overton, Juergen Haas, Christian J. Stoeckert Jr.:
EpoDB: An Erythropoiesis Gene Expression Database/Knowledge Base. German Conference on Bioinformatics 1996: 40-45 - [c1]Fidel Salas, Juergen Haas, G. Christian Overton, Christian J. Stoeckert Jr.:
EpoDB: An Erythropoiesis Gene Expression Database in Progress. German Conference on Bioinformatics - Selected Papers 1996: 52-61
Coauthor Index
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