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2020 – today
- 2024
[j26]Sujoy Roy, Shane Morrell, Lili Zhao, Ramin Homayouni:
Large-scale identification of social and behavioral determinants of health from clinical notes: comparison of Latent Semantic Indexing and Generative Pretrained Transformer (GPT) models. BMC Medical Informatics Decis. Mak. 24(1): 296 (2024)- 2023
- [j25]Ramin Homayouni, Prashanti Manda, Aik Choon Tan
, Zhaohui S. Qin:
Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference. Frontiers Big Data 6 (2023) - 2022
- [j24]Ramin Homayouni, Huixiao Hong, Prashanti Manda, Bindu Nanduri, Inimary T. Toby:
Editorial: Unleashing Innovation on Precision Public Health-Highlights From the MCBIOS and MAQC 2021 Joint Conference. Frontiers Artif. Intell. 5: 859700 (2022) - 2020
- [j23]Jonathan D. Wren, Yongsheng Bai, Zhaohui S. Qin, Da Yan, Ramin Homayouni:
Proceedings of the 2019 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 21-S(4): 254 (2020)
2010 – 2019
- 2019
- [j22]Sujoy Roy, Kazi I. Zaman, Robert W. Williams, Ramin Homayouni:
Evaluation of Sirtuin-3 probe quality and co-expressed genes using literature cohesion. BMC Bioinform. 20-S(2): 31-43 (2019) - [j21]Jonathan D. Wren, Robert J. Doerksen, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar:
Proceedings of the 2018 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) conference. BMC Bioinform. 20-S(2): 95:1-95:5 (2019) - [j20]Oguz Akbilgic, Ramin Homayouni, Kevin Heinrich, Max Raymond Langham, Robert Lowell Davis:
Unstructured Text in EMR Improves Prediction of Death after Surgery in Children. Informatics 6(1): 4 (2019) - 2017
- [j19]Jonathan D. Wren, Mikhail G. Dozmorov, Inimary T. Toby, Bindu Nanduri, Ramin Homayouni, Prashanti Manda, Shraddha Thakkar:
Proceedings of the 2017 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinform. 18(14): 498:1-498:5 (2017) - [j18]Eric C. Rouchka, Julia H. Chariker, David Tieri, Juw Won Park, Shreedharkumar D. Rajurkar, Vikas Singh, Nishchal K. Verma, Yan Cui, Mark L. Farman, Bradford Condon, Neil Moore, Jerzy W. Jaromczyk, Jolanta Jaromczyk, Daniel R. Harris, Patrick Calie, Eun Kyong Shin, Robert L. Davis, Arash Shaban-Nejad, Joshua M. Mitchell, Robert M. Flight, Qing Jun Wang, Richard M. Higashi, Teresa W.-M. Fan, Andrew N. Lane, Hunter N. B. Moseley, Liangqun Lu, Bernie J. Daigle, Xi Chen, Andrey Smelter, Li Chen, Bailey K. Phan, Nathaniel J. Serpico, Ethan G. Toney, Caroline E. Melton, Jennifer R. Mandel, Bernie J. Daigle Jr., Hao Chen, Kazi I. Zaman, Ramin Homayouni, Patrick J. Trainor, Samantha M. Carlisle, Andrew P. DeFilippis, Shesh N. Rai:
Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics: Burns, TN, USA. April 21-23, 2017. BMC Bioinform. 18(S-9) (2017) - [j17]Shengtong Han, Hongmei Zhang, Ramin Homayouni, Wilfried Karmaus:
An efficient Bayesian approach for Gaussian Bayesian network structure learning. Commun. Stat. Simul. Comput. 46(7): 5070-5084 (2017) - 2016
- [j16]Sujoy Roy, Brandon C. Curry, Behrouz Madahian, Ramin Homayouni:
Prioritization, clustering and functional annotation of MicroRNAs using latent semantic indexing of MEDLINE abstracts. BMC Bioinform. 17(S-13): 350 (2016) - 2015
- [j15]Behrouz Madahian, Sujoy Roy, Dale Bowman, Lih-Yuan Deng, Ramin Homayouni:
A Bayesian approach for inducing sparsity in generalized linear models with multi-category response. BMC Bioinform. 16(S13): S13 (2015) - [j14]Behrouz Madahian, Lih-Yuan Deng, Ramin Homayouni:
Development of a literature informed Bayesian machine learning method for feature extraction and classification. BMC Bioinform. 16(S15): P9 (2015) - 2014
- [j13]Behrouz Madahian, Lih-Yuan Deng, Ramin Homayouni:
Development of sparse Bayesian multinomial generalized linear model for multi-class prediction. BMC Bioinform. 15(S-10): P14 (2014) - 2012
- [j12]Behrouz Madahian, Robert C. Klesges, Lisa Klesges, Ramin Homayouni:
System dynamics modeling of childhood obesity. BMC Bioinform. 13(S-12): A13 (2012) - 2011
- [j11]Sujoy Roy, Kevin Heinrich, Vinhthuy Phan, Michael W. Berry, Ramin Homayouni:
Latent Semantic Indexing of PubMed abstracts for identification of transcription factor candidates from microarray derived gene sets. BMC Bioinform. 12(S-10): S19 (2011) - [j10]Eric C. Rouchka, Robert M. Flight, Ramin Homayouni:
Proceedings of the Tenth Annual UT-ORNL-KBRIN Bioinformatics Summit 2011. BMC Bioinform. 12(S-7): A1 (2011) - [j9]Laasya Vadlamudi, Lynn A. Jones, Ramin Homayouni:
ColonyTrak: a web tool and database system for managing experimental animal models. BMC Bioinform. 12(S-7): A11 (2011) - [c3]Nicholas A. Furlotte, Lijing Xu, Robert W. Williams, Ramin Homayouni:
Literature-based Evaluation of Microarray Normalization Procedures. BIBM 2011: 608-612 - [c2]Behrouz Madahian, Lisa Klesges, Ramin Homayouni:
System dynamics modeling of childhood obesity. BIBM Workshops 2011: 900 - [c1]Lijing Xu, Ramin Homayouni, E. Olusegun George:
Literature based Bayesian analysis of gene expression data. BIBM Workshops 2011: 1032 - 2010
- [j8]Teeradache Viangteeravat, Ian M. Brooks, Somchan Vuthipadadon, Emin Kuscu, Naga Nagisetty, Ebony Smith, Ramin Homayouni, Chanchai McDonald:
Slim-Prim: an integrated data system for clinical and translational research. BMC Bioinform. 11(S-4): P5 (2010) - [j7]Elina Tjioe, Michael W. Berry, Ramin Homayouni:
Discovering gene functional relationships using FAUN (Feature Annotation Using Nonnegative matrix factorization). BMC Bioinform. 11(S-6): S14 (2010)
2000 – 2009
- 2009
- [j6]Sujoy Roy, Lijing Xu, Ramin Homayouni:
LSI based framework to predict gene regulatory information. BMC Bioinform. 10(S-7) (2009) - [j5]Teeradache Viangteeravat, Ian M. Brooks, Somchan Vuthipadadon, Eunice Y. Huang, Ebony Smith, Ramin Homayouni, Chanchai McDonald:
Slim-Prim: an integrated data system for clinical and translational research. BMC Bioinform. 10(S-7) (2009) - [j4]Mohammed Yeasin, Haritha Malempati, Ramin Homayouni, Mohammad S. Sorower:
A systematic study on latent semantic analysis model parameters for mining biomedical literature. BMC Bioinform. 10(S-7) (2009) - 2008
- [j3]Elina Tjioe, Michael W. Berry, Ramin Homayouni, Kevin Heinrich:
Using a literature-based NMF model for discovering gene functional relationships. BMC Bioinform. 9(S-7) (2008) - [j2]Kevin Heinrich, Michael W. Berry, Ramin Homayouni:
Gene Tree Labeling Using Nonnegative Matrix Factorization on Biomedical Literature. Comput. Intell. Neurosci. 2008 (2008) - 2005
- [j1]Ramin Homayouni, Kevin Heinrich, Lai Wei, Michael W. Berry:
Gene clustering by Latent Semantic Indexing of MEDLINE abstracts. Bioinform. 21(1): 104-115 (2005)
Coauthor Index
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