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2020 – today
- 2023
[j10]Thao Vu, Elizabeth Litkowski
, Weixuan Liu, Katherine A. Pratte, Leslie Lange, Russell Bowler, Farnoush Banaei Kashani, Katerina J. Kechris:
NetSHy: network summarization via a hybrid approach leveraging topological properties. Bioinform. 39(1) (2023)- [j9]Charlie M. Carpenter, Lucas A. Gillenwater, Russell Bowler, Katerina J. Kechris, Debashis Ghosh:
TreeKernel: interpretable kernel machine tests for interactions between -omics and clinical predictors with applications to metabolomics and COPD phenotypes. BMC Bioinform. 24(1): 398 (2023) - 2022
- [j8]Elise F. Palzer, Christine Wendt, Russell Bowler, Craig P. Hersh, Sandra E. Safo, Eric F. Lock:
sJIVE: Supervised joint and individual variation explained. Comput. Stat. Data Anal. 175: 107547 (2022) - [j7]Mohamed Abdel-Hafiz, Mesbah Najafi, Shahab Helmi, Katherine A. Pratte, Yonghua Zhuang, Weixuan Liu, Katerina J. Kechris, Russell Bowler, Leslie Lange, Farnoush Banaei Kashani:
Significant Subgraph Detection in Multi-omics Networks for Disease Pathway Identification. Frontiers Big Data 5 (2022) - [c3]Sundous Hussein, Thao Vu, Leslie Lange, Russell Bowler, Katerina J. Kechris, Farnoush Banaei Kashani:
Effective Subject Representation based on Multi-omics Disease Networks using Graph Embedding. BIBM 2022: 1911-1918 - [c2]Andrew Hill, Russell Bowler, Katerina J. Kechris, Farnoush Banaei Kashani:
Semi-supervised Embedding for Scalable and Accurate Time Series Clustering. IEEE Big Data 2022: 942-951 - 2021
- [j6]Charlie M. Carpenter, Weiming Zhang, Lucas A. Gillenwater, Cameron Severn, Tusharkanti Ghosh, Russell Bowler, Katerina J. Kechris, Debashis Ghosh:
PaIRKAT: A pathway integrated regression-based kernel association test with applications to metabolomics and COPD phenotypes. PLoS Comput. Biol. 17(10) (2021) - [j5]Zifeng Wang, Aria Masoomi, Zhonghui Xu, Adel Boueiz, Sool Lee, Tingting Zhao, Russell Bowler, Michael H. Cho, Edwin K. Silverman, Craig P. Hersh, Jennifer G. Dy, Peter J. Castaldi:
Improved prediction of smoking status via isoform-aware RNA-seq deep learning models. PLoS Comput. Biol. 17(10) (2021) - [i1]Elise F. Palzer, Christine Wendt, Russell Bowler, Craig P. Hersh, Sandra E. Safo, Eric F. Lock:
sJIVE: Supervised Joint and Individual Variation Explained. CoRR abs/2102.13278 (2021)
2010 – 2019
- 2019
- [c1]Yuan An, Siling Chen, Nicholas Locantore, Matthew Allinder, Divya Mohan, Russell Bowler:
The Utility of Shapelets for Analyzing Physical Activity of COPD Patients and non-COPD controls. BIBM 2019: 1023-1030 - 2017
- [j4]Charlotte Siska, Russell Bowler, Katerina J. Kechris:
The discordant method: a novel approach for differential correlation. Bioinform. 33(1): 150 (2017) - 2016
- [j3]Charlotte Siska, Russell Bowler, Katerina J. Kechris:
The discordant method: a novel approach for differential correlation. Bioinform. 32(5): 690-696 (2016) - 2014
- [j2]Grant Hughes, Charmion Cruickshank-Quinn, Richard Reisdorph, Sharon Lutz, Irina Petrache, Nichole Reisdorph, Russell Bowler, Katerina J. Kechris:
MSPrep - Summarization, normalization and diagnostics for processing of mass spectrometry-based metabolomic data. Bioinform. 30(1): 133-134 (2014) - [j1]Jen-hwa Chu, Craig P. Hersh, Peter J. Castaldi, Michael H. Cho, Benjamin A. Raby, Nan M. Laird, Russell Bowler, Stephen I. Rennard, Joseph Loscalzo, John Quackenbush, Edwin K. Silverman:
Analyzing networks of phenotypes in complex diseases: methodology and applications in COPD. BMC Syst. Biol. 8: 78 (2014)
Coauthor Index
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