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2020 – today
- 2023
[j28]David S. Wishart
, Eponine Oler, Harrison Peters, Anchi Guo, Sagan Girod, Scott Han, Sukanta Saha, Vicki W. Lui, Marcia Levatte, Vasuk Gautam, Rima Kaddurah-Daouk, Naama Karu:
MiMeDB: the Human Microbial Metabolome Database. Nucleic Acids Res. 51(D1): 611-620 (2023)- 2022
- [j27]David S. Wishart, Anchi Guo, Eponine Oler, Fei Wang, Afia Anjum, Harrison Peters, Raynard Dizon, Zinat Sayeeda, Siyang Tian, Brian L. Lee, Mark V. Berjanskii, Robert Mah, Mai Yamamoto, Juan Jovel, Claudia Torres-Calzada, Mickel Hiebert-Giesbrecht, Vicki W. Lui, Dorna Varshavi, Dorsa Varshavi, Dana Allen, David Arndt, Nitya Khetarpal, Aadhavya Sivakumaran, Karxena Harford, Selena Sanford, Kristen Yee, Xuan Cao, Zachary Budinski, Jaanus Liigand, Lun Zhang, Jiamin Zheng, Rupasri Mandal, Naama Karu, Maija Dambrova, Helgi B. Schiöth, Russell Greiner, Vasuk Gautam:
HMDB 5.0: the Human Metabolome Database for 2022. Nucleic Acids Res. 50(D1): 622-631 (2022) - [j26]David S. Wishart, Zinat Sayeeda, Zachary Budinski, Anchi Guo, Brian L. Lee, Mark V. Berjanskii, Manoj Rout, Harrison Peters, Raynard Dizon, Robert Mah, Claudia Torres-Calzada, Mickel Hiebert-Giesbrecht, Dorna Varshavi, Dorsa Varshavi, Eponine Oler, Dana Allen, Xuan Cao, Vasuk Gautam, Andrew Maras, Ella F. Poynton, Pegah Tavangar, Vera Yang, Jeffrey A. van Santen, Rajarshi Ghosh, Saurav Sarma, Eleanor Knutson, Victoria Sullivan, Amy M. Jystad, Ryan S. Renslow, Lloyd W. Sumner, Roger G. Linington, John R. Cort:
NP-MRD: the Natural Products Magnetic Resonance Database. Nucleic Acids Res. 50(D1): 665-677 (2022) - 2021
- [j25]Siyang Tian, Xuan Cao, Russell Greiner, Carin Li, Anchi Guo, David S. Wishart:
CyProduct: A Software Tool for Accurately Predicting the Byproducts of Human Cytochrome P450 Metabolism. J. Chem. Inf. Model. 61(6): 3128-3140 (2021) - [j24]David S. Wishart, Brendan Bartok, Eponine Oler, Kevin Y. H. Liang, Zachary Budinski, Mark V. Berjanskii, Anchi Guo, Xuan Cao, Michael Wilson:
MarkerDB: an online database of molecular biomarkers. Nucleic Acids Res. 49(Database-Issue): D1259-D1267 (2021) - 2020
- [j23]David S. Wishart, Carin Li, Ana Marcu, Hasan Badran, Allison Pon, Zachary Budinski, Jonas Patron, Debra Lipton, Xuan Cao, Eponine Oler, Krissa Li, Maïlys Paccoud, Chelsea Hong, An Chi Guo, Christopher Chan, William Wei, Miguel Ramirez-Gaona:
PathBank: a comprehensive pathway database for model organisms. Nucleic Acids Res. 48(Database-Issue): D470-D478 (2020)
2010 – 2019
- 2018
- [j22]David S. Wishart, Yannick D. Feunang, An Chi Guo, Elvis J. Lo, Ana Marcu, Jason R. Grant, Tanvir Sajed, Daniel Johnson, Carin Li, Zinat Sayeeda, Nazanin Assempour, Ithayavani Iynkkaran, Yifeng Liu, Adam Maciejewski, Nicola Gale, Alex Wilson, Lucy Chin, Ryan Cummings, Diana Le, Allison Pon, Craig Knox, Michael Wilson:
DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 46(Database-Issue): D1074-D1082 (2018) - [j21]David S. Wishart, Yannick Djoumbou Feunang, Ana Marcu, An Chi Guo, Kevin Y. H. Liang, Rosa Vázquez-Fresno, Tanvir Sajed, Daniel Johnson, Carin Li, Naama Karu, Zinat Sayeeda, Elvis J. Lo, Nazanin Assempour, Mark V. Berjanskii, Sandeep Singhal, David Arndt, Yongjie Liang, Hasan Badran, Jason R. Grant, Arnau Serra-Cayuela, Yifeng Liu, Rupa Mandal, Vanessa Neveu, Allison Pon, Craig Knox, Michael Wilson, Claudine Manach, Augustin Scalbert:
HMDB 4.0: the human metabolome database for 2018. Nucleic Acids Res. 46(Database-Issue): D608-D617 (2018) - 2017
- [j20]Miguel Ramirez-Gaona, Ana Marcu, Allison Pon, An Chi Guo, Tanvir Sajed, Noah A. Wishart, Naama Karu, Yannick Djoumbou Feunang, David Arndt, David S. Wishart:
YMDB 2.0: a significantly expanded version of the yeast metabolome database. Nucleic Acids Res. 45(Database-Issue): D440-D445 (2017) - 2016
- [j19]Tanvir Sajed, Ana Marcu, Miguel Ramirez-Gaona, Allison Pon, An Chi Guo, Craig Knox, Michael Wilson, Jason R. Grant, Yannick Djoumbou, David S. Wishart:
ECMDB 2.0: A richer resource for understanding the biochemistry of E. coli. Nucleic Acids Res. 44(Database-Issue): 495-501 (2016) - 2015
- [j18]David S. Wishart, David Arndt, Allison Pon, Tanvir Sajed, Anchi Guo, Yannick Djoumbou, Craig Knox, Michael Wilson, Yongjie Liang, Jason R. Grant, Yifeng Liu, Seyed Ali Goldansaz, Stephen M. Rappaport:
T3DB: the toxic exposome database. Nucleic Acids Res. 43(Database-Issue): 928-934 (2015) - 2014
- [j17]Timothy Jewison, Yilu Su, Fatemeh Miri Disfany, Yongjie Liang, Craig Knox, Adam Maciejewski, Jenna Poelzer, Jessica Huynh, You Zhou, David Arndt, Yannick Djoumbou, Yifeng Liu, Lu Deng, Anchi Guo, Beomsoo Han, Allison Pon, Michael Wilson, Shahrzad Rafatnia, Philip Liu, David S. Wishart:
SMPDB 2.0: Big Improvements to the Small Molecule Pathway Database. Nucleic Acids Res. 42(Database-Issue): 478-484 (2014) - [j16]Vivian Law, Craig Knox, Yannick Djoumbou, Timothy Jewison, Anchi Guo, Yifeng Liu, Adam Maciejewski, David Arndt, Michael Wilson, Vanessa Neveu, Alexandra Tang, Geraldine Gabriel, Carol Ly, Sakina Adamjee, Zerihun T. Dame, Beomsoo Han, You Zhou, David S. Wishart:
DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Res. 42(Database-Issue): 1091-1097 (2014) - 2013
- [j15]Anchi Guo, Timothy Jewison, Michael Wilson, Yifeng Liu, Craig Knox, Yannick Djoumbou, Patrick Lo, Rupasri Mandal, Ram Krishnamurthy, David S. Wishart:
ECMDB: The E. coli Metabolome Database. Nucleic Acids Res. 41(Database-Issue): 625-630 (2013) - [j14]David S. Wishart, Timothy Jewison, Anchi Guo, Michael Wilson, Craig Knox, Yifeng Liu, Yannick Djoumbou, Rupasri Mandal, Farid Aziat, Edison Dong, Souhaila Bouatra, Igor Sinelnikov, David Arndt, Jianguo Xia, Philip Liu, Faizath Yallou, Trent C. Bjorndahl, Rolando Perez-Pineiro, Roman Eisner, Felicity Allen, Vanessa Neveu, Russell Greiner, Augustin Scalbert:
HMDB 3.0 - The Human Metabolome Database in 2013. Nucleic Acids Res. 41(Database-Issue): 801-807 (2013) - 2012
- [j13]Timothy Jewison, Craig Knox, Vanessa Neveu, Yannick Djoumbou, Anchi Guo, Jacqueline Lee, Philip Liu, Rupasri Mandal, Ram Krishnamurthy, Igor Sinelnikov, Michael Wilson, David S. Wishart:
YMDB: the Yeast Metabolome Database. Nucleic Acids Res. 40(Database-Issue): 815-820 (2012) - [j12]David Arndt, Jianguo Xia, Yifeng Liu, You Zhou, Anchi Guo, Joseph A. Cruz, Igor Sinelnikov, Karen Budwill, Camilla L. Nesbø, David S. Wishart:
METAGENassist: a comprehensive web server for comparative metagenomics. Nucleic Acids Res. 40(Web-Server-Issue): 88-95 (2012) - 2011
- [j11]Craig Knox, Vivian Law, Timothy Jewison, Philip Liu, Son Ly, Alex Frolkis, Allison Pon, Kelly Banco, Christine Mak, Vanessa Neveu, Yannick Djoumbou, Roman Eisner, Anchi Guo, David S. Wishart:
DrugBank 3.0: a comprehensive resource for 'Omics' research on drugs. Nucleic Acids Res. 39(Database-Issue): 1035-1041 (2011) - 2010
- [j10]Alex Frolkis, Craig Knox, Emilia Lim, Timothy Jewison, Vivian Law, David D. Hau, Philip Liu, Bijaya Gautam, Son Ly, Anchi Guo, Jianguo Xia, Yongjie Liang, Savita Shrivastava, David S. Wishart:
SMPDB: The Small Molecule Pathway Database. Nucleic Acids Res. 38(Database-Issue): 480-487 (2010) - [j9]Emilia Lim, Allison Pon, Yannick Djoumbou, Craig Knox, Savita Shrivastava, Anchi Guo, Vanessa Neveu, David S. Wishart:
T3DB: a comprehensively annotated database of common toxins and their targets. Nucleic Acids Res. 38(Database-Issue): 781-786 (2010)
2000 – 2009
- 2009
- [j8]David S. Wishart, Craig Knox, Anchi Guo, Roman Eisner, Nelson Young, Bijaya Gautam, David D. Hau, Nick Psychogios, Edison Dong, Souhaila Bouatra, Rupasri Mandal, Igor Sinelnikov, Jianguo Xia, Leslie Jia, Joseph A. Cruz, Emilia Lim, Constance A. Sobsey, Savita Shrivastava, Paul Huang, Philip Liu, Lydia Fang, Jun Peng, Ryan Fradette, Dean Cheng, Dan Tzur, Melisa Clements, Avalyn Lewis, Andrea De Souza, Azaret Zuniga, Margot Dawe, Yeping Xiong, Derrick Clive, Russell Greiner, Alsu Nazyrova, Rustem Shaykhutdinov, Liang Li, Hans J. Vogel, Ian J. Forsythe:
HMDB: a knowledgebase for the human metabolome. Nucleic Acids Res. 37(Database-Issue): 603-610 (2009) - 2008
- [j7]David S. Wishart, David Arndt, Mark V. Berjanskii, Anchi Guo, Yi Shi, Savita Shrivastava, Jianjun Zhou, You Zhou, Guohui Lin:
PPT-DB: the protein property prediction and testing database. Nucleic Acids Res. 36(Database-Issue): 222-229 (2008) - [j6]David S. Wishart, Craig Knox, Anchi Guo, Dean Cheng, Savita Shrivastava, Dan Tzur, Bijaya Gautam, Murtaza Hassanali:
DrugBank: a knowledgebase for drugs, drug actions and drug targets. Nucleic Acids Res. 36(Database-Issue): 901-906 (2008) - 2007
- [j5]David S. Wishart, Dan Tzur, Craig Knox, Roman Eisner, Anchi Guo, Nelson Young, Dean Cheng, Kevin Jewell, David Arndt, Summit Sawhney, Chris Fung, Lisa Nikolai, Mike Lewis, Marie-Aude Coutouly, Ian J. Forsythe, Peter Tang, Savita Shrivastava, Kevin Jeroncic, Paul Stothard, Godwin Amegbey, David Block, David D. Hau, James Wagner, Jessica Miniaci, Melisa Clements, Mulu Gebremedhin, Natalie Guo, Ying Zhang, Gavin E. Duggan, Glen D. MacInnis, Alim M. Weljie, Reza Dowlatabadi, Fiona Bamforth, Derrick Clive, Russell Greiner, Liang Li, Tom Marrie, Brian D. Sykes, Hans J. Vogel, Lori Querengesser:
HMDB: the Human Metabolome Database. Nucleic Acids Res. 35(Database-Issue): 521-526 (2007) - 2006
- [j4]David S. Wishart, Craig Knox, Anchi Guo, Savita Shrivastava, Murtaza Hassanali, Paul Stothard, Zhan Chang, Jennifer Woolsey:
DrugBank: a comprehensive resource for in silico drug discovery and exploration. Nucleic Acids Res. 34(Database-Issue): 668-672 (2006) - 2005
- [j3]Paul Stothard, Gary H. Van Domselaar, Savita Shrivastava, Anchi Guo, Brian O'Neill, Joseph A. Cruz, Michael Ellison, David S. Wishart:
BacMap: an interactive picture atlas of annotated bacterial genomes. Nucleic Acids Res. 33(Database-Issue): 317-320 (2005) - [j2]Gary H. Van Domselaar, Paul Stothard, Savita Shrivastava, Joseph A. Cruz, Anchi Guo, Xiaoli Dong, Paul Lu, Duane Szafron, Russell Greiner, David S. Wishart:
BASys: a web server for automated bacterial genome annotation. Nucleic Acids Res. 33(Web-Server-Issue): 455-459 (2005) - 2004
- [j1]Shan Sundararaj, Anchi Guo, Bahram Habibi-Nazhad, Melania Rouani, Paul Stothard, Michael Ellison, David S. Wishart:
The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli. Nucleic Acids Res. 32(Database-Issue): 293-295 (2004)
Coauthor Index
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