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ORCIDChad L. Myers
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2020 – today
- 2021
[j21]Hamid Safizadeh
, Scott W. Simpkins, Justin Nelson, Sheena C. Li, Jeff S. Piotrowski, Mami Yoshimura, Yoko Yashiroda, Hiroyuki Hirano, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers:
Improving Measures of Chemical Structural Similarity Using Machine Learning on Chemical-Genetic Interactions. J. Chem. Inf. Model. 61(9): 4156-4172 (2021)
2010 – 2019
- 2018
- [j20]Justin Nelson, Scott W. Simpkins, Hamid Safizadeh, Sheena C. Li, Jeff S. Piotrowski, Hiroyuki Hirano, Yoko Yashiroda, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers:
MOSAIC: a chemical-genetic interaction data repository and web resource for exploring chemical modes of action. Bioinform. 34(7): 1251-1252 (2018) - [j19]Scott W. Simpkins, Justin Nelson, Raamesh Deshpande, Sheena C. Li, Jeff S. Piotrowski, Erin H. Wilson, Abraham A. Gebre, Hamid Safizadeh, Reika Okamoto, Mami Yoshimura, Michael Costanzo, Yoko Yashiroda, Yoshikazu Ohya, Hiroyuki Osada, Minoru Yoshida, Charles Boone, Chad L. Myers:
Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interactions. PLoS Comput. Biol. 14(10) (2018) - 2014
- [i1]Chandrima Sarkar, Raamesh Deshpande, Chad L. Myers:
Analysis of Barcode sequence features to find anomalies due to amplification Bias. CoRR abs/1402.6775 (2014) - 2013
- [j18]Omar Wagih, Matej Usaj, Anastasia Baryshnikova, Benjamin VanderSluis, Elena Kuzmin, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Leopold Parts:
SGAtools: one-stop analysis and visualization of array-based genetic interaction screens. Nucleic Acids Res. 41(Webserver-Issue): 591-596 (2013) - [j17]Recep Colak, TaeHyung Kim, Magali Michaut, Mark G. F. Sun, Manuel Irimia, Jeremy Bellay, Chad L. Myers, Benjamin J. Blencowe, Philip M. Kim:
Distinct Types of Disorder in the Human Proteome: Functional Implications for Alternative Splicing. PLoS Comput. Biol. 9(4) (2013) - 2011
- [j16]Magali Michaut, Anastasia Baryshnikova, Michael Costanzo, Chad L. Myers, Brenda J. Andrews, Charles Boone, Gary D. Bader:
Protein Complexes are Central in the Yeast Genetic Landscape. PLoS Comput. Biol. 7(2) (2011) - 2010
- [j15]Judice L. Y. Koh, Huiming Ding, Michael Costanzo, Anastasia Baryshnikova, Kiana Toufighi, Gary D. Bader, Chad L. Myers, Brenda J. Andrews, Charles Boone:
DRYGIN: a database of quantitative genetic interaction networks in yeast. Nucleic Acids Res. 38(Database-Issue): 502-507 (2010) - [j14]Gaurav Pandey, Bin Zhang, Aaron N. Chang, Chad L. Myers, Jun Zhu, Vipin Kumar, Eric E. Schadt:
An Integrative Multi-Network and Multi-Classifier Approach to Predict Genetic Interactions. PLoS Comput. Biol. 6(9) (2010) - [j13]Raamesh Deshpande, Shikha Sharma, Catherine M. Verfaillie, Wei-Shou Hu, Chad L. Myers:
A Scalable Approach for Discovering Conserved Active Subnetworks across Species. PLoS Comput. Biol. 6(12) (2010) - [c5]Gang Fang, Rui Kuang, Gaurav Pandey, Michael S. Steinbach, Chad L. Myers, Vipin Kumar:
Subspace Differential Coexpression Analysis: Problem Definition and a General Approach. Pacific Symposium on Biocomputing 2010: 145-156
2000 – 2009
- 2009
- [j12]Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Amy A. Caudy, David C. Hess, Olga G. Troyanskaya:
The impact of incomplete knowledge on evaluation: an experimental benchmark for protein function prediction. Bioinform. 25(18): 2404-2410 (2009) - [j11]Gaurav Pandey, Chad L. Myers, Vipin Kumar:
Incorporating functional inter-relationships into protein function prediction algorithms. BMC Bioinform. 10 (2009) - [j10]Matthew A. Hibbs, Chad L. Myers, Curtis Huttenhower, David C. Hess, Kai Li, Amy A. Caudy, Olga G. Troyanskaya:
Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis. PLoS Comput. Biol. 5(3) (2009) - [c4]Jeremy Bellay, Benjamin VanderSluis, Yungil Kim, Sunayan Bandyopadhyay, Chad L. Myers:
Characterization of systems-level organization through mining large-scale genetic interaction networks. GENSiPS 2009: 1-4 - [c3]Gaurav Pandey, Gowtham Atluri, Michael S. Steinbach, Chad L. Myers, Vipin Kumar:
An association analysis approach to biclustering. KDD 2009: 677-686 - 2008
- [j9]Yuanfang Guan, Chad L. Myers, Rong Lu, Ihor Lemischka, Carol J. Bult, Olga G. Troyanskaya:
A Genomewide Functional Network for the Laboratory Mouse. PLoS Comput. Biol. 4(9) (2008) - 2007
- [j8]Chad L. Myers, Olga G. Troyanskaya:
Context-sensitive data integration and prediction of biological networks. Bioinform. 23(17): 2322-2330 (2007) - [j7]Matthew A. Hibbs, David C. Hess, Chad L. Myers, Curtis Huttenhower, Kai Li, Olga G. Troyanskaya:
Exploring the functional landscape of gene expression: directed search of large microarray compendia. Bioinform. 23(20): 2692-2699 (2007) - [j6]Curtis Huttenhower, Avi I. Flamholz, Jessica N. Landis, Sauhard Sahi, Chad L. Myers, Kellen L. Olszewski, Matthew A. Hibbs, Nathan O. Siemers, Olga G. Troyanskaya, Hilary A. Coller:
Nearest Neighbor Networks: clustering expression data based on gene neighborhoods. BMC Bioinform. 8 (2007) - 2006
- [j5]Curtis Huttenhower, Matthew A. Hibbs, Chad L. Myers, Olga G. Troyanskaya:
A scalable method for integration and functional analysis of multiple microarray datasets. Bioinform. 22(23): 2890-2897 (2006) - [j4]Rachel S. G. Sealfon, Matthew A. Hibbs, Curtis Huttenhower, Chad L. Myers, Olga G. Troyanskaya:
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool. BMC Bioinform. 7: 443 (2006) - 2005
- [j3]Chad L. Myers, Xing Chen, Olga G. Troyanskaya:
Visualization-based discovery and analysis of genomic aberrations in microarray data. BMC Bioinform. 6: 146 (2005) - [j2]Sun-Yuan Kung, Chad L. Myers, Xinying Zhang:
A recursive QR approach to adaptive equalization of time-varying MIMO channels. Commun. Inf. Syst. 5(2): 169-196 (2005) - 2004
- [j1]Chad L. Myers, Maitreya J. Dunham, Sun-Yuan Kung, Olga G. Troyanskaya:
Accurate detection of aneuploidies in array CGH and gene expression microarray data. Bioinform. 20(18): 3533-3543 (2004) - [c2]Sun-Yuan Kung, Chad L. Myers, Xinying Zhang:
A recursive QR approach to semi-blind equalization of time-varying MIMO channels. ICASSP (4) 2004: 437-440 - [c1]Xinying Zhang, Chad L. Myers, Sun-Yuan Kung:
Cross-weighted Fisher discriminant analysis for visualization of DNA microarray data. ICASSP (5) 2004: 589-592
Coauthor Index
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