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ORCIDAnaïs Baudot
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- affiliation: Aix-Marseille Université, France
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2020 – today
- 2024
[j15]Anthony Baptista, Galadriel Brière, Anaïs Baudot:
Random walk with restart on multilayer networks: from node prioritisation to supervised link prediction and beyond. BMC Bioinform. 25(1): 70 (2024)- [j14]Morgane Térézol
, Anaïs Baudot, Ozan Ozisik:
ODAMNet: A Python package to identify molecular relationships between chemicals and rare diseases using overlap, active module and random walk approaches. SoftwareX 26: 101701 (2024) - [i5]Nadine Ben Boina, Brigitte Mossé, Anaïs Baudot, Elisabeth Remy:
Refining Boolean models with the partial most permissive scheme. CoRR abs/2407.09954 (2024) - 2023
- [j13]Judith Lambert, Anne-Louise Leutenegger, Anne-Sophie Jannot, Anaïs Baudot:
Tracking clusters of patients over time enables extracting information from medico-administrative databases. J. Biomed. Informatics 139: 104309 (2023) - [i4]Anthony Baptista, Rubén J. Sánchez-García, Anaïs Baudot, Ginestra Bianconi:
Zoo Guide to Network Embedding. CoRR abs/2305.03474 (2023) - 2022
- [j12]Ozan Ozisik, Morgane Térézol, Anaïs Baudot:
orsum: a Python package for filtering and comparing enrichment analyses using a simple principle. BMC Bioinform. 23(1): 293 (2022) - [c1]Judith Lambert, Anne-Louise Leutenegger, Anne-Sophie Jannot, Anaïs Baudot:
Tracking Temporal Clusters from Patient Networks. MIE 2022: 155-156 - 2021
- [j11]Elva María Novoa-del-Toro, Efrén Mezura-Montes, Matthieu Vignes, Morgane Térézol, Frédérique Magdinier, Laurent Tichit, Anaïs Baudot:
A multi-objective genetic algorithm to find active modules in multiplex biological networks. PLoS Comput. Biol. 17(8) (2021) - [i3]Anthony Baptista, Aitor González, Anaïs Baudot:
Universal Multilayer Network Exploration by Random Walk with Restart. CoRR abs/2107.04565 (2021) - 2020
- [i2]Léo Pio-Lopez, Alberto Valdeolivas, Laurent Tichit, Elisabeth Remy, Anaïs Baudot:
MultiVERSE: a multiplex and multiplex-heterogeneous network embedding approach. CoRR abs/2008.10085 (2020)
2010 – 2019
- 2019
- [j10]Alberto Valdeolivas, Laurent Tichit, Claire Navarro, Sophie Perrin, Gaëlle Odelin, Nicolas Levy, Pierre Cau, Elisabeth Remy, Anaïs Baudot:
Random walk with restart on multiplex and heterogeneous biological networks. Bioinform. 35(3): 497-505 (2019) - 2018
- [b1]Anaïs Baudot:
Biologie des systèmes et des réseaux pour l'étude des maladies. Aix Marseille University, France, 2018 - [i1]Gilles Didier, Alberto Valdeolivas, Anaïs Baudot:
Identifying communities from multiplex biological networks by randomized optimization of modularity. F1000Research 7: 1042 (2018) - 2015
- [j9]Sushil Tripathi, Åsmund Flobak, Konika Chawla, Anaïs Baudot, Torunn Bruland, Liv Thommesen, Martin Kuiper, Astrid Lægreid:
The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms. BMC Syst. Biol. 9: 40 (2015) - [j8]Åsmund Flobak, Anaïs Baudot, Elisabeth Remy, Liv Thommesen, Denis Thieffry, Martin Kuiper, Astrid Lægreid:
Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling. PLoS Comput. Biol. 11(8) (2015) - 2013
- [j7]Lionel Spinelli, Philippe Gambette, Charles E. Chapple, Benoît Robisson, Anaïs Baudot, Henri Garreta, Laurent Tichit, Alain Guénoche, Christine Brun:
Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters. Biosyst. 113(2): 91-95 (2013) - 2012
- [j6]Enrico Glaab, Anaïs Baudot, Natalio Krasnogor, Reinhard Schneider, Alfonso Valencia:
EnrichNet: network-based gene set enrichment analysis. Bioinform. 28(18): 451-457 (2012) - 2010
- [j5]Enrico Glaab, Anaïs Baudot, Natalio Krasnogor, Alfonso Valencia:
TopoGSA: network topological gene set analysis. Bioinform. 26(9): 1271-1272 (2010) - [j4]Enrico Glaab, Anaïs Baudot, Natalio Krasnogor, Alfonso Valencia:
Extending pathways and processes using molecular interaction networks to analyse cancer genome data. BMC Bioinform. 11: 597 (2010)
2000 – 2009
- 2008
- [j3]Jean-Baptiste Angelelli, Anaïs Baudot, Marie-Christine Brun, Alain Guénoche:
Two local dissimilarity measures for weighted graphs with application to protein interaction networks. Adv. Data Anal. Classif. 2(1): 3-16 (2008) - [j2]Anaïs Baudot, Jean-Baptiste Angelelli, Alain Guénoche, Bernard Jacq, Christine Brun:
Defining a Modular Signalling Network from the Fly Interactome. BMC Syst. Biol. 2: 45 (2008) - 2006
- [j1]Anaïs Baudot, David Martin, Pierre Mouren, François Chevenet, Alain Guénoche, Bernard Jacq, Marie-Christine Brun:
PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks. Bioinform. 22(2): 248-250 (2006)
Coauthor Index
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