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2020 – today
- 2024
[j12]Arne Schmidt
, Pablo Morales-Álvarez, Lee A. D. Cooper, Lee A. Newberg, Andinet Enquobahrie, Rafael Molina, Aggelos K. Katsaggelos:
Focused active learning for histopathological image classification. Medical Image Anal. 95: 103162 (2024)- [i4]Arne Schmidt, Pablo Morales-Álvarez, Lee A. D. Cooper, Lee A. Newberg, Andinet Enquobahrie, Aggelos K. Katsaggelos, Rafael Molina:
Focused Active Learning for Histopathological Image Classification. CoRR abs/2404.04663 (2024) - 2023
- [j11]Jacob Moore, Harald Scheirich, Shreeraj Jadhav, Andinet Enquobahrie, Beatriz Paniagua, Andrew Wilson, Aaron Bray, Ganesh Sankaranarayanan, Rachel B. Clipp:
The interactive medical simulation toolkit (iMSTK): an open source platform for surgical simulation. Frontiers Virtual Real. 4 (2023) - [j10]Samuel Gerber, Marc Niethammer, Ebrahim Ebrahim, Joseph Piven, Stephen R. Dager, Martin Styner, Stephen R. Aylward, Andinet Enquobahrie:
Optimal transport features for morphometric population analysis. Medical Image Anal. 84: 102696 (2023) - [c36]Jean-Christophe Fillion-Robin, Aaron Bray, Jared Vicory, Rachel B. Clipp, Guilherme J. M. Garcia, John S. Rhee, Andinet Enquobahrie:
An Integrated Virtual Surgical Planning System for Nasal Airway Obstruction. ISBI 2023: 1-5 - [c35]T. Osika, Ebrahim Ebrahim, Martin Styner, Marc Niethammer, T. Sawyer, Andinet Enquobahrie:
Harmonization Benchmarking Tool for Neuroimaging Datasets. ISBI 2023: 1-5 - 2022
- [j9]Jared Vicory, Guilherme J. M. Garcia, John S. Rhee, Andinet Enquobahrie:
Toward automatic atlas-based surgical planning for septoplasty. Int. J. Comput. Assist. Radiol. Surg. 17(2): 403-411 (2022) - [j8]Aaron Bray, Rachel B. Clipp, M. Umar Qureshi, Sorin Mitran, Andinet Enquobahrie:
gLBM: A GPU enabled Lattice Boltzmann Method Library. J. Open Source Softw. 7(69): 2555 (2022) - [i3]Samuel Gerber, Marc Niethammer, Ebrahim Ebrahim, Joseph Piven, Stephen R. Dager, Martin Styner, Stephen R. Aylward, Andinet Enquobahrie:
Optimal Transport Features for Morphometric Population Analysis. CoRR abs/2208.05891 (2022) - 2020
- [c34]Jianxun Wang, David L. Roberts, Andinet Enquobahrie:
Inferring Continuous Treatment Doses from Historical Data via Model-Based Entropy-Regularized Reinforcement Learning. ACML 2020: 433-448
2010 – 2019
- 2019
- [j7]Ruoqiao Zhang, Dzenan Zukic, Darrin W. Byrd, Andinet Enquobahrie, Adam M. Alessio, Kevin Cleary, Filip Banovac, Paul E. Kinahan:
PET/CT-guided biopsy with respiratory motion correction. Int. J. Comput. Assist. Radiol. Surg. 14(12): 2187-2198 (2019) - [c33]Deepak Roy Chittajallu, Bo Dong, Paul Tunison, Roddy Collins, Katerina O. Wells, James W. Fleshman, Ganesh Sankaranarayanan, Steven D. Schwaitzberg, Lora Cavuoto, Andinet Enquobahrie:
XAI-CBIR: Explainable AI System for Content based Retrieval of Video Frames from Minimally Invasive Surgery Videos. ISBI 2019: 66-69 - [c32]Liyun Tu, Antonio R. Porras, Albert Oh, Natasha Leporé, Graham C. Buck, Deki Tsering, Andinet Enquobahrie, Robert T. Keating, Gary F. Rogers, Marius George Linguraru:
Quantitative evaluation of local head malformations from 3 dimensional photography: application to craniosynostosis. Medical Imaging: Computer-Aided Diagnosis 2019: 1095035 - [c31]Zahil Shanis, Samuel Gerber, Mingchen Gao, Andinet Enquobahrie:
Intramodality Domain Adaptation Using Self Ensembling and Adversarial Training. DART/MIL3ID@MICCAI 2019: 28-36 - [c30]Dhruv Sharma, Zahil Shanis, Chandan K. Reddy, Samuel Gerber, Andinet Enquobahrie:
Active Learning Technique for Multimodal Brain Tumor Segmentation Using Limited Labeled Images. DART/MIL3ID@MICCAI 2019: 148-156 - [c29]Samantha Horvath, Venkata Sreekanth Arikatla, Kevin Cleary, Karun Sharma, Avi Z. Rosenberg, Andinet Enquobahrie:
Towards an advanced virtual ultrasound-guided renal biopsy trainer. Medical Imaging: Image-Guided Procedures 2019: 109511W - [c28]Deepak Roy Chittajallu, Arslan Basharat, Paul Tunison, Samantha Horvath, Katerina O. Wells, Steven G. Leeds, James W. Fleshman, Ganesh Sankaranarayanan, Andinet Enquobahrie:
Content-based retrieval of video segments from minimally invasive surgery videos using deep convolutional video descriptors and iterative query refinement. Medical Imaging: Image-Guided Procedures 2019: 109512Q - 2018
- [j6]Antonio R. Porras, Beatriz Paniagua, Scott Ensel, Robert T. Keating, Gary F. Rogers, Andinet Enquobahrie, Marius George Linguraru:
Locally Affine Diffeomorphic Surface Registration and Its Application to Surgical Planning of Fronto-Orbital Advancement. IEEE Trans. Medical Imaging 37(7): 1690-1700 (2018) - [c27]Rachel B. Clipp, Jared Vicory, Samantha Horvath, Sorin Mitran, Julia S. Kimbell, John S. Rhee, Andinet Enquobahrie:
An Interactive, Patient-Specific Virtual Surgical Planning System for Upper Airway Obstruction Treatments. EMBC 2018: 5802-5805 - [c26]Liyun Tu, Antonio R. Porras, Albert Oh, Natasha Leporé, Manuel Mastromanolis, Deki Tsering, Beatriz Paniagua, Andinet Enquobahrie, Robert T. Keating, Gary F. Rogers, Marius George Linguraru:
Radiation-free quantification of head malformations in craniosynostosis patients from 3D photography. Medical Imaging: Computer-Aided Diagnosis 2018: 105751U - [c25]Samantha Horvath, Beatriz Paniagua, Johan Andruejol, Antonio R. Porras, Marius George Linguraru, Andinet Enquobahrie:
Osteotomy planner: an open-source tool for osteotomy simulation. Medical Imaging: Image-Guided Procedures 2018: 105762R - [c24]Venkata Sreekanth Arikatla, Mohit Tyagi, Andinet Enquobahrie, Tung Nguyen, George H. Blakey, Raymond White, Beatriz Paniagua:
High fidelity virtual reality orthognathic surgery simulator. Medical Imaging: Image-Guided Procedures 2018: 1057612 - 2017
- [j5]Di Qi, Karthikeyan Panneerselvam, Woojin Ahn, Venkata Sreekanth Arikatla, Andinet Enquobahrie, Suvranu De:
Virtual interactive suturing for the Fundamentals of Laparoscopic Surgery (FLS). J. Biomed. Informatics 75: 48-62 (2017) - [c23]Liyun Tu, Antonio R. Porras, Scott Ensel, Deki Tsering, Beatriz Paniagua, Andinet Enquobahrie, Albert Oh, Robert T. Keating, Gary F. Rogers, Marius George Linguraru:
Intracranial Volume Quantification from 3D Photography. CARE/CLIP@MICCAI 2017: 116-123 - [c22]Antonio R. Porras, Beatriz Paniagua, Andinet Enquobahrie, Scott Ensel, Hina Shah, Robert T. Keating, Gary F. Rogers, Marius George Linguraru:
Locally Affine Diffeomorphic Surface Registration for Planning of Metopic Craniosynostosis Surgery. MICCAI (2) 2017: 479-487 - [c21]Lucas Potter, Venkata Sreekanth Arikatla, Aaron Bray, Jeffrey B. Webb, Andinet Enquobahrie:
Physiology informed virtual surgical planning: a case study with a virtual airway surgical planner and BioGears. Medical Imaging: Image-Guided Procedures 2017: 101351T - [c20]Pooneh R. Tabrizi, Hongqiang Sang, Hadi F. Talari, Diego Preciado, Reza Monfaredi, Brian Reilly, Venkata Sreekanth Arikatla, Andinet Enquobahrie, Kevin Cleary:
Temporal bone dissection simulator for training pediatric otolaryngology surgeons. Medical Imaging: Image-Guided Procedures 2017: 101352O - [i2]Ali Hasan, Ebrahim M. Kolahdouz, Andinet Enquobahrie, Thomas G. Caranasos, John P. Vavalle, Boyce E. Griffith:
Image-based immersed boundary model of the aortic root. CoRR abs/1705.04279 (2017) - 2016
- [c19]Antonio R. Porras, Dzenan Zukic, Andinet Enquobahrie, Gary F. Rogers, Marius George Linguraru:
Personalized Optimal Planning for the Surgical Correction of Metopic Craniosynostosis. CLIP@MICCAI 2016: 60-67 - [c18]Venkata Sreekanth Arikatla, Ricardo Ortiz, Suvranu De, Andinet Enquobahrie:
A Unified Framework for Haptic Interaction in Multimodal Virtual Environments. MMVR 2016: 19-24 - [c17]Venkata Sreekanth Arikatla, Ricardo Ortiz, Tansel Halic, Sean Radigan, David Thompson, Suvranu De, Andinet Enquobahrie:
An Approach for Automated Scene Management in Real-Time Medical Simulation Framework. MMVR 2016: 25-28 - [c16]Cory W. Quammen, Russell M. Taylor II, Pavel Krajcevski, Sorin Mitran, Andinet Enquobahrie, Richard Superfine, Brad Davis, Stephanie Davis, Carlton J. Zdanski:
The Virtual Pediatric Airways Workbench. MMVR 2016: 295-300 - 2015
- [c15]Beatriz Paniagua, Dzenan Zukic, Ricardo Ortiz, Stephen R. Aylward, Brent Golden, Tung Nguyen, Andinet Enquobahrie:
Ultrasound-Guided Navigation System for Orthognathic Surgery. AE-CAI 2015: 1-10 - [c14]Bing Wu, Sung Hun Sim, Andinet Enquobahrie, Ricardo Ortiz:
Effects of visual latency on visual-haptic experience of stiffness. QoMEX 2015: 1-6 - [c13]Liang He, Ricardo Ortiz, Andinet Enquobahrie, Dinesh Manocha:
Interactive continuous collision detection for topology changing models using dynamic clustering. I3D 2015: 47-54 - [i1]Dzenan Zukic, Julien Finet, Emmanuel Wilson, Filip Banovac, Giuseppe Esposito, Kevin Cleary, Andinet Enquobahrie:
SlicerPET: A workflow based software module for PET/CT guided needle biopsy. CoRR abs/1511.08118 (2015) - 2014
- [j4]Yixun Liu, Andriy Kot, Fotis Drakopoulos, Chengjun Yao, Andriy Fedorov, Andinet Enquobahrie, Olivier Clatz, Nikos P. Chrisochoides:
An ITK implementation of a physics-based non-rigid registration method for brain deformation in image-guided neurosurgery. Frontiers Neuroinformatics 8: 33 (2014) - [c12]Julien Finet, Ricardo Ortiz, Johan Andruejol, Andinet Enquobahrie, Julien Jomier, Jason Payne, Stephen R. Aylward:
Bender: An Open Source Software for Efficient Model Posing and Morphing. ISBMS 2014: 203-210 - [c11]Luis G. Torres, Hamidreza Azimian, Andinet Enquobahrie:
A user-friendly automated port placement planning system for laparoscopic robotic surgery. Medical Imaging: Image-Guided Procedures 2014: 903613 - 2013
- [j3]Alberto Vaccarella, Elena De Momi, Andinet Enquobahrie, Giancarlo Ferrigno:
Unscented Kalman Filter Based Sensor Fusion for Robust Optical and Electromagnetic Tracking in Surgical Navigation. IEEE Trans. Instrum. Meas. 62(7): 2067-2081 (2013) - [c10]Andinet Enquobahrie, Vikas Shivaprabhu, Stephen R. Aylward, Julien Finet, Kevin Cleary, Ron Alterovitz:
Patient-specific port placement for laparoscopic surgery using atlas-based registration. Medical Imaging: Image-Guided Procedures 2013: 86711M - 2012
- [c9]Xunlei Wu, Jianhua Yao, Andinet Enquobahrie, Huai-Ping Lee, Michel A. Audette:
Integration of a Multigrid ODE solver into an open medical simulation framework. EMBC 2012: 3090-3093 - [c8]Huai-Ping Lee, Michel A. Audette, Grand Roman Joldes, Andinet Enquobahrie:
Neurosurgery simulation using non-linear finite element modeling and haptic interaction. Medical Imaging: Image-Guided Procedures 2012: 83160H - [c7]Alberto Vaccarella, Elena De Momi, Marta Valenti, Giancarlo Ferrigno, Andinet Enquobahrie:
Application of unscented Kalman filter for robust pose estimation in image-guided surgery. Medical Imaging: Image-Guided Procedures 2012: 83161K - 2011
- [j2]Kevin Gary, Andinet Enquobahrie, Luis Ibáñez, Patrick Cheng, Ziv Yaniv, Kevin Cleary, Shylaja Kokoori, Benjamin Muffih, John Heidenreich:
Agile methods for open source safety-critical software. Softw. Pract. Exp. 41(9): 945-962 (2011) - [c6]Alberto Vaccarella, Mirko Daniele Comparetti, Andinet Enquobahrie, Giancarlo Ferrigno, Elena De Momi:
Sensors management in robotic neurosurgery: The ROBOCAST project. EMBC 2011: 2119-2122 - [c5]Danielle F. Pace, Andinet Enquobahrie, Hua Yang, Stephen R. Aylward, Marc Niethammer:
Deformable image registration of sliding organs using anisotropic diffusive regularization. ISBI 2011: 407-413 - 2010
- [c4]Michel A. Audette, Ahmad Kolahi, Andinet Enquobahrie, Claudio Gatti, Kevin Cleary:
Reducing depth uncertainty in large surgical workspaces, with applications to veterinary medicine. Medical Imaging: Image-Guided Procedures 2010: 762525
2000 – 2009
- 2009
- [c3]Julien Jomier, Luis Ibáñez, Andinet Enquobahrie, Danielle F. Pace, Kevin Cleary:
An open-source framework for testing tracking devices using Lego Mindstorms. Medical Imaging: Image-Guided Procedures 2009: 72612S - 2008
- [j1]Andinet Enquobahrie, David Gobbi, Matthew W. Turek, Patrick Cheng, Ziv Yaniv, Frank Lindseth, Kevin Cleary:
Designing tracking software for image-guided surgery applications: IGSTK experience. Int. J. Comput. Assist. Radiol. Surg. 3(5): 395-403 (2008) - 2006
- [c2]Peng Cheng, Hui Zhang, Hee-su Kim, Kevin Gary, M. Brian Blake, David Gobbi, Stephen R. Aylward, Julien Jomier, Andinet Enquobahrie, Rick Avila, Luis Ibáñez, Kevin Cleary:
IGSTK: framework and example application using an open source toolkit for image-guided surgery applications. Medical Imaging: Image-Guided Procedures 2006: 61411Y - 2004
- [c1]Andinet Enquobahrie, Anthony P. Reeves, David F. Yankelevitz, Claudia I. Henschke:
Automated detection of pulmonary nodules from whole lung helical CT scans: performance comparison for isolated and attached nodules. Medical Imaging: Image Processing 2004
Coauthor Index
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