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2020 – today
- 2024
[i2]Raima Carol Appaw, Nicholas Fountain-Jones, Michael A. Charleston:
What makes a small-world network? Leveraging machine learning for the robust prediction and classification of networks. CoRR abs/2403.13215 (2024)- 2020
- [j19]K. V. S. N. Rama Rao
, James Montgomery, Saurabh Kumar Garg, Michael A. Charleston:
Bioacoustics Data Analysis - A Taxonomy, Survey and Open Challenges. IEEE Access 8: 57684-57708 (2020)
2010 – 2019
- 2019
- [j18]Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie:
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia. Briefings Bioinform. 20(2): 384-389 (2019) - [r1]Michael A. Charleston:
Molecular Phylogenetics. Encyclopedia of Bioinformatics and Computational Biology (2) 2019: 700-711 - 2016
- [j17]Benjamin Drinkwater, Michael A. Charleston:
Towards sub-quadratic time and space complexity solutions for the dated tree reconciliation problem. Algorithms Mol. Biol. 11: 15 (2016) - [j16]Benjamin Drinkwater, Michael A. Charleston:
RASCAL: A Randomized Approach for Coevolutionary Analysis. J. Comput. Biol. 23(3): 218-227 (2016) - [j15]Martin McGrane, Michael A. Charleston:
Biological Network Edit Distance. J. Comput. Biol. 23(9): 776-788 (2016) - [c7]Vincent Gramoli, Michael A. Charleston, Bryn Jeffries, Irena Koprinska, Martin McGrane, Alex Radu, Anastasios Viglas, Kalina Yacef:
Mining autograding data in computer science education. ACSW 2016: 1 - 2015
- [j14]Cali E. Willet, Bianca Haase, Michael A. Charleston, Claire M. Wade:
Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker. Bioinform. 31(4): 599-601 (2015) - [j13]Benjamin Drinkwater, Michael A. Charleston:
A time and space complexity reduction for coevolutionary analysis of trees generated under both a Yule and Uniform model. Comput. Biol. Chem. 57: 61-71 (2015) - [j12]Alex Radu, Michael A. Charleston:
Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks. J. Comput. Biol. 22(7): 687-697 (2015) - [j11]Alistair M. Senior, Michael A. Charleston, Mathieu Lihoreau, Jérôme Buhl, David Raubenheimer, Stephen J. Simpson:
Evolving Nutritional Strategies in the Presence of Competition: A Geometric Agent-Based Model. PLoS Comput. Biol. 11(3) (2015) - [c6]Benjamin Drinkwater, Michael A. Charleston:
A Sub-quadratic Time and Space Complexity Solution for the Dated Tree Reconciliation Problem for Select Tree Topologies. WABI 2015: 93-107 - 2014
- [j10]Benjamin Drinkwater, Michael A. Charleston:
Introducing TreeCollapse: a novel greedy algorithm to solve the cophylogeny reconstruction problem. BMC Bioinform. 15(S-16): S14 (2014) - [j9]Alex Radu, Michael A. Charleston:
Node Fingerprinting: An Efficient Heuristic for Aligning Biological Networks. J. Comput. Biol. 21(10): 760-770 (2014) - 2013
- [j8]Ilana Lichtenstein, Michael A. Charleston, Tibério S. Caetano, Jennifer R. Gamble, Mathew A. Vadas:
Active Subnetwork Recovery with a Mechanism-Dependent Scoring Function; with application to Angiogenesis and Organogenesis studies. BMC Bioinform. 14: 59 (2013) - [c5]Richard Gluga, Judy Kay, Raymond Lister, Simon, Michael A. Charleston, James Harland, Donna Teague:
A conceptual model for reflecting on expected learning vs. demonstrated student performance. ACE 2013: 77-86 - 2011
- [j7]Md. Shaik Sadi, Fei-Ching Kuo, Joshua Wing Kei Ho, Michael A. Charleston, Tsong Yueh Chen:
Verification of phylogenetic Inference Programs Using Metamorphic Testing. J. Bioinform. Comput. Biol. 9(6): 729-747 (2011)
2000 – 2009
- 2009
- [j6]Ran Libeskind-Hadas, Michael A. Charleston:
On the Computational Complexity of the Reticulate Cophylogeny Reconstruction Problem. J. Comput. Biol. 16(1): 105-117 (2009) - 2008
- [c4]Joshua Wing Kei Ho, Maurizio Stefani, Cristobal G. dos Remedios, Michael A. Charleston:
Differential variability analysis of gene expression and its application to human diseases. ISMB 2008: 390-398 - [i1]Jeremy G. Sumner, Michael A. Charleston:
Phylogenetic estimation with partial likelihood tensors. CoRR abs/0807.3387 (2008) - 2007
- [c3]Ali Al Mazari, Albert Y. Zomaya, Michael A. Charleston, Roger J. Garsia:
A Novel Algorithm for Adaptive and Neutral Evolutionary Patterns Associated with HIV Drug Resistance. AICCSA 2007: 285-292 - 2006
- [j5]Michael A. Charleston, Susan L. Perkins:
Traversing the tangle: Algorithms and applications for cophylogenetic studies. J. Biomed. Informatics 39(1): 62-71 (2006) - [c2]Michael A. Charleston, Alison P. Galvani:
A cophylogenetic perspective on host-pathogen evolution. Disease Evolution: Models, Concepts, and Data Analyses 2006: 145-160 - 2001
- [j4]Michael A. Charleston:
Hitch-Hiking: A Parallel Heuristic Search Strategy, Applied to the Phylogeny Problem. J. Comput. Biol. 8(1): 79-91 (2001)
1990 – 1999
- 1998
- [j3]Michael A. Charleston:
Spectrum: spectral analysis of phylogenetic data. Bioinform. 14(1): 98-99 (1998) - 1996
- [c1]Roderic D. M. Page, Michael A. Charleston:
Reconciled trees and incongruent gene and species trees. Mathematical Hierarchies and Biology 1996: 57-70 - 1995
- [j2]Michael A. Charleston:
Toward a Characterization of Landscapes of Combinatorial Optimization Problems, with Special Attention to the Phylogeny Problem. J. Comput. Biol. 2(3): 439-450 (1995) - 1994
- [j1]Michael A. Charleston, Michael D. Hendy, David Penny:
The Effects of Sequence Length, Tree Topology, and Number of Taxa on the Performance of Phylogenetic Methods. J. Comput. Biol. 1(2): 133-151 (1994)
Coauthor Index
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