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ORCIDDirk H. J. Poot
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2020 – today
- 2024
[c29]Shishuai Wang, Hua Ma, Juan Antonio Hernández Tamames, Stefan Klein, Dirk H. J. Poot:
qMRI Diffuser: Quantitative T1 Mapping of the Brain Using a Denoising Diffusion Probabilistic Model. DGM4MICCAI@MICCAI 2024: 129-138- [i3]Shishuai Wang, Hua Ma, Juan Antonio Hernández Tamames, Stefan Klein, Dirk H. J. Poot:
qMRI Diffusor: Quantitative T1 Mapping of the Brain using a Denoising Diffusion Probabilistic Model. CoRR abs/2407.16477 (2024) - 2023
- [j20]Emanoel R. Sabidussi, Stefan Klein
, Ben Jeurissen, Dirk H. J. Poot:
dtiRIM: A generalisable deep learning method for diffusion tensor imaging. NeuroImage 269: 119900 (2023) - 2022
- [j19]Quinten Beirinckx, Ben Jeurissen, Michele Nicastro, Dirk H. J. Poot, Marleen Verhoye, Arnold J. den Dekker, Jan Sijbers:
Model-based super-resolution reconstruction with joint motion estimation for improved quantitative MRI parameter mapping. Comput. Medical Imaging Graph. 100: 102071 (2022) - [j18]Riwaj Byanju, Stefan Klein, Alexandra Cristobal-Huerta, Juan Antonio Hernández Tamames, Dirk H. J. Poot:
Time efficiency analysis for undersampled quantitative MRI acquisitions. Medical Image Anal. 78: 102390 (2022) - [j17]Laura Nunez-Gonzalez, Martijn Nagtegaal, Dirk H. J. Poot, Jeroen de Bresser, Matthias J. P. van Osch, Juan Antonio Hernández Tamames, Frans M. Vos:
Accuracy and repeatability of joint sparsity multi-component estimation in MR Fingerprinting. NeuroImage 263: 119638 (2022) - [j16]Chaoping Zhang, Dimitrios Karkalousos, Pierre-Louis Bazin, Bram F. Coolen, Hugo Vrenken, Jan-Jakob Sonke, Birte U. Forstmann, Dirk H. J. Poot, Matthan W. A. Caan:
A unified model for reconstruction and R2* mapping of accelerated 7T data using the quantitative recurrent inference machine. NeuroImage 264: 119680 (2022) - 2021
- [j15]Wyke Huizinga, Dirk H. J. Poot, Elisabeth J. Vinke, F. Wenzel, Esther Bron, N. Toussaint, Christian Ledig, Henri A. Vrooman, Mohammad Arfan Ikram, Wiro J. Niessen, Meike W. Vernooij, Stefan Klein:
Differences Between MR Brain Region Segmentation Methods: Impact on Single-Subject Analysis. Frontiers Big Data 4: 577164 (2021) - [j14]Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot:
Recurrent inference machines as inverse problem solvers for MR relaxometry. Medical Image Anal. 74: 102220 (2021) - [c28]Banafshe Shafieizargar, Ben Jeurissen, Dirk H. J. Poot, Arnold J. den Dekker, Jan Sijbers:
Multi-contrast multi-shot EPI for accelerated diffusion MRI. EMBC 2021: 3869-3872 - [i2]Emanoel R. Sabidussi, Stefan Klein, Matthan W. A. Caan, Shabab Bazrafkan, Arnold J. den Dekker, Jan Sijbers, Wiro J. Niessen, Dirk H. J. Poot:
Recurrent Inference Machines as inverse problem solvers for MR relaxometry. CoRR abs/2106.07379 (2021) - 2020
- [j13]Quinten Beirinckx, Gabriel Ramos-Llordén, Ben Jeurissen, Dirk H. J. Poot, Paul M. Parizel, Marleen Verhoye, Jan Sijbers, Arnold J. den Dekker:
Joint Maximum Likelihood Estimation of Motion and T1 Parameters from Magnetic Resonance Images in a Super-resolution Framework: a Simulation Study. Fundam. Informaticae 172(2): 105-128 (2020) - [j12]Georgius A. M. Arkesteijn, Dirk H. J. Poot, Mohammad Arfan Ikram, Wiro J. Niessen, Lucas J. van Vliet, Meike W. Vernooij, Frans M. Vos:
Orientation Prior and Consistent Model Selection Increase Sensitivity of Tract-Based Spatial Statistics in Crossing-Fiber Regions. IEEE Trans. Medical Imaging 39(2): 308-319 (2020) - [j11]Willem van Valenberg, Stefan Klein, Frans M. Vos, Kirsten Koolstra, Lucas J. van Vliet, Dirk H. J. Poot:
An Efficient Method for Multi-Parameter Mapping in Quantitative MRI Using B-Spline Interpolation. IEEE Trans. Medical Imaging 39(5): 1681-1689 (2020)
2010 – 2019
- 2019
- [j10]Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein:
Groupwise Multichannel Image Registration. IEEE J. Biomed. Health Informatics 23(3): 1171-1180 (2019) - [c27]Chaoping Zhang, Florian Dubost, Marleen de Bruijne, Stefan Klein, Dirk H. J. Poot:
APIR-Net: Autocalibrated Parallel Imaging Reconstruction Using a Neural Network. MLMIR@MICCAI 2019: 36-46 - [i1]Chaoping Zhang, Florian Dubost, Marleen de Bruijne, Stefan Klein, Dirk H. J. Poot:
APIR-Net: Autocalibrated Parallel Imaging Reconstruction using a Neural Network. CoRR abs/1909.09006 (2019) - 2018
- [j9]Wyke Huizinga, Dirk H. J. Poot, Meike W. Vernooij, Gennady Roshchupkin, Esther Bron, Mohammad Arfan Ikram, Daniel Rueckert, Wiro J. Niessen, Stefan Klein:
A spatio-temporal reference model of the aging brain. NeuroImage 169: 11-22 (2018) - [c26]Wei Sun, Dirk H. J. Poot, Xuan Yang, Wiro J. Niessen, Stefan Klein:
Averaged Stochastic Optimization for Medical Image Registration Based on Variance Reduction. WBIR 2018: 69-79 - 2017
- [j8]Wei Sun, Dirk H. J. Poot, Ihor Smal, Xuan Yang, Wiro J. Niessen, Stefan Klein:
Stochastic optimization with randomized smoothing for image registration. Medical Image Anal. 35: 146-158 (2017) - [c25]Georgius A. M. Arkesteijn, Dirk H. J. Poot, M. Niestijl, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos:
Longitudinal analysis of diffusion-weighted MRI with a ball-and-sticks model. ISBI 2017: 783-786 - 2016
- [j7]Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, R. Klaassen, Bram F. Coolen, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Mathias Polfliet, Jef Vandemeulebroucke, Alexander Leemans, Wiro J. Niessen, Stefan Klein:
PCA-based groupwise image registration for quantitative MRI. Medical Image Anal. 29: 65-78 (2016) - [c24]Jean-Marie Guyader, Wyke Huizinga, Valerio Fortunati, Dirk H. J. Poot, Matthijs van Kranenburg, Jifke F. Veenland, Margarethus M. Paulides, Wiro J. Niessen, Stefan Klein:
Total Correlation-Based Groupwise Image Registration for Quantitative MRI. CVPR Workshops 2016: 626-633 - [c23]Wyke Huizinga, Dirk H. J. Poot, Gennady V. Roshchupkin, Esther E. Bron, Mohammad Arfan Ikram, Meike W. Vernooij, Daniel Rueckert, Wiro J. Niessen, Stefan Klein:
Modeling the brain morphology distribution in the general aging population. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2016: 97880I - 2015
- [j6]Dirk H. J. Poot, Stefan Klein:
Detecting Statistically Significant Differences in Quantitative MRI Experiments, Applied to Diffusion Tensor Imaging. IEEE Trans. Medical Imaging 34(5): 1164-1176 (2015) - [c22]Georgius A. M. Arkesteijn, Dirk H. J. Poot, Meike de Groot, Meike W. Vernooij, Wiro J. Niessen, Lucas J. van Vliet, Frans M. Vos:
CSF contamination-invariant statistics in diffusion-weighted MRI. ISBI 2015: 454-457 - [c21]Jianfei Yang, Dirk H. J. Poot, Matthan W. A. Caan, Frans M. Vos, Lucas J. van Vliet:
Rank-2 model-order selection in diffusion tensor MRI: Infromation complexity based on the total Kullback-Leibler divergence. ISBI 2015: 926-929 - [c20]Gwendolyn Van Steenkiste, Dirk H. J. Poot, Ben Jeurissen, Arnold J. den Dekker, Jan Sijbers:
High resolution T1 estimation from multiple low resolution magnetic resonance images. ISBI 2015: 1036-1039 - [c19]Jianfei Yang, Dirk H. J. Poot, Georgius A. M. Arkesteijn, Matthan W. A. Caan, Lucas J. van Vliet, Frans M. Vos:
Estimating diffusion properties in complex fiber configurations based on structure-adaptive multi-valued tensor-field filtering. Medical Imaging: Image Processing 2015: 941320 - 2014
- [c18]Jean-Marie Guyader, Livia Bernardin, Naomi H. M. Douglas, Dirk H. J. Poot, Wiro J. Niessen, Stefan Klein:
Influence of image registration on ADC images computed from free-breathing diffusion MRIs of the abdomen. Medical Imaging: Image Processing 2014: 90340O - [c17]Wyke Huizinga, Stefan Klein, Dirk H. J. Poot:
Fast Multidimensional B-spline Interpolation Using Template Metaprogramming. WBIR 2014: 11-20 - [c16]Wyke Huizinga, Dirk H. J. Poot, Jean-Marie Guyader, Henk Smit, Matthijs van Kranenburg, Robert Jan van Geuns, André Uitterdijk, Heleen M. M. van Beusekom, Bram F. Coolen, Alexander Leemans, Wiro J. Niessen, Stefan Klein:
Non-rigid Groupwise Image Registration for Motion Compensation in Quantitative MRI. WBIR 2014: 184-193 - 2013
- [c15]Esben Plenge, Dirk H. J. Poot, Wiro J. Niessen, Erik Meijering:
Super-Resolution Reconstruction Using Cross-Scale Self-similarity in Multi-slice MRI. MICCAI (3) 2013: 123-130 - [c14]Oleh Dzyubachyk, Qian Tao, Dirk H. J. Poot, Hildo J. Lamb, Katja Zeppenfeld, Boudewijn P. F. Lelieveldt, Rob J. van der Geest:
Improved Myocardial Scar Characterization by Super-Resolution Reconstruction in Late Gadolinium Enhanced MRI. MICCAI (3) 2013: 147-154 - [c13]Wyke Huizinga, Coert T. Metz, Dirk H. J. Poot, Meike de Groot, Wiro J. Niessen, Alexander Leemans, Stefan Klein:
Groupwise Registration for Correcting Subject Motion and Eddy Current Distortions in Diffusion MRI Using a PCA Based Dissimilarity Metric. CDMRI/MMBC@MICCAI 2013: 163-174 - [c12]Dirk H. J. Poot, Gyula Kotek, Wiro J. Niessen, Stefan Klein:
Bias correction of maximum likelihood estimation in quantitative MRI. Medical Imaging: Image Processing 2013: 86691F - [c11]Hakim C. Achterberg, Dirk H. J. Poot, Fedde van der Lijn, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen, Marleen de Bruijne:
Local appearance features for robust MRI brain structure segmentation across scanning protocols. Medical Imaging: Image Processing 2013: 866905 - 2012
- [j5]Ines Blockx, Geert De Groof, Marleen Verhoye, Johan Van Audekerke, Kerstin Raber, Dirk H. J. Poot, Jan Sijbers, Alexander P. Osmand, Stephan Von Hörsten, Annemie van der Linden:
Microstructural changes observed with DKI in a transgenic Huntington rat model: Evidence for abnormal neurodevelopment. NeuroImage 59(2): 957-967 (2012) - [c10]Artem Khmelinskii, Esben Plenge, Peter Kok, Oleh Dzyubachyk, Dirk H. J. Poot, E. Suidgeest, Charl P. Botha, Wiro J. Niessen, Louise van der Weerd, Erik Meijering, Boudewijn P. F. Lelieveldt:
Super-resolution reconstruction of whole-body MRI mouse data: An interactive approach. ISBI 2012: 1723-1726 - [c9]Esben Plenge, Dirk H. J. Poot, Monique Bernsen, Gyula Kotek, Gavin Houston, Piotr Wielopolski, Louise van der Weerd, Wiro J. Niessen, Erik Meijering:
Super-resolution in MRI: better images faster? Medical Imaging: Image Processing 2012: 83143V - 2011
- [c8]Maryna Kudzinava, Dirk H. J. Poot, Annemarie Plaisier, Jan Sijbers:
Optimized workflow for diffusion kurtosis imaging of newborns. ISBI 2011: 922-926 - [c7]Dirk H. J. Poot, Marleen de Bruijne, Meike W. Vernooij, Mohammad Arfan Ikram, Wiro J. Niessen:
Improved Tissue Segmentation by Including an MR Acquisition Model. MBIA 2011: 152-159 - 2010
- [j4]Dirk H. J. Poot, Arnold J. den Dekker, Eric Achten, Marleen Verhoye, Jan Sijbers:
Optimal Experimental Design for Diffusion Kurtosis Imaging. IEEE Trans. Medical Imaging 29(3): 819-829 (2010) - [j3]Matthan W. A. Caan, Ganesh Khedoe, Dirk H. J. Poot, Arjan den Dekker, Sílvia Delgado Olabarriaga, Kees Grimbergen, Lucas J. van Vliet, Frans M. Vos:
Estimation of Diffusion Properties in Crossing Fiber Bundles. IEEE Trans. Medical Imaging 29(8): 1504-1515 (2010) - [c6]Jeny Rajan, Dirk H. J. Poot, Jaber Juntu, Jan Sijbers:
Segmentation Based Noise Variance Estimation from Background MRI Data. ICIAR (1) 2010: 62-70 - [c5]Matthan W. A. Caan, Ganesh Khedoe, Dirk H. J. Poot, Arjan den Dekker, Sílvia Delgado Olabarriaga, Kees Grimbergen, Lucas J. van Vliet, Frans Vos:
Adaptive Noise Filtering for Accurate and Precise Diffusion Estimation in Fiber Crossings. MICCAI (1) 2010: 167-174 - [c4]Dirk H. J. Poot, Vincent Van Meir, Jan Sijbers:
General and Efficient Super-Resolution Method for Multi-slice MRI. MICCAI (1) 2010: 615-622
2000 – 2009
- 2009
- [j2]Wim Van Hecke, Jan Sijbers, Steve De Backer, Dirk H. J. Poot, Paul M. Parizel, Alexander Leemans:
On the construction of a ground truth framework for evaluating voxel-based diffusion tensor MRI analysis methods. NeuroImage 46(3): 692-707 (2009) - [j1]Arnold J. den Dekker, Dirk H. J. Poot, Robert Bos, Jan Sijbers:
Likelihood-Based Hypothesis Tests for Brain Activation Detection From MRI Data Disturbed by Colored Noise: A Simulation Study. IEEE Trans. Medical Imaging 28(2): 287-296 (2009) - 2008
- [c3]Wouter Pintjens, Dirk H. J. Poot, Marleen Verhoye, Annemarie van der Linden, Jan Sijbers:
Susceptibility correction for improved tractography using high field DT-EPI. Medical Imaging: Image Processing 2008: 69142I - [c2]Dirk H. J. Poot, Jan Sijbers, Arnold J. den Dekker:
An exploration of spatial similarities in temporal noise spectra in fMRI measurements. Medical Imaging: Image Processing 2008: 69142F - 2006
- [c1]Jan Sijbers, Arnold J. den Dekker, Dirk H. J. Poot, Robert Bos, Marleen Verhoye, Nadja Van Camp, Annemie van der Linden:
Robust estimation of the noise variance from background MR data. Medical Imaging: Image Processing 2006: 61446B
Coauthor Index
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