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Vojtech Spiwok
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2020 – today
- 2022
- [j7]Dalibor Trapl, Martin Krupicka, Vladimír Visnovský, Jana Hozzová, Jaroslav Olha, Ales Krenek, Vojtech Spiwok:
Property Map Collective Variable as a Useful Tool for a Force Field Correction. J. Chem. Inf. Model. 62(3): 567-576 (2022) - [j6]Dalibor Trapl, Vojtech Spiwok:
Analysis of the Results of Metadynamics Simulations by metadynminer and metadynminer3d. R J. 14(3): 46-58 (2022) - 2021
- [j5]Haiying Wang, Estelle Pujos-Guillot, Blandine Comte, João Luís de Miranda, Vojtech Spiwok, Ivan Chorbev, Filippo Castiglione, Paolo Tieri, Steven Watterson, Roisin McAllister, Tiago De Melo Malaquias, Massimiliano Zanin, Taranjit Singh Rai, Huiru Zheng:
Deep learning in systems medicine. Briefings Bioinform. 22(2): 1543-1559 (2021) - 2020
- [j4]Kim T. Gurwitz, Prakash Singh Gaur, Louisa J. Bellis, Lee D. Larcombe, Eva Alloza, Balint Laszlo Balint, Alexander Botzki, Jure Dimec, Victoria Dominguez Del Angel, Pedro L. Fernandes, Eija Korpelainen, Roland Krause, Mateusz Kuzak, Loredana Le Pera, Brane Leskosek, Jessica M. Lindvall, Diana Marek, Paula Andrea Martínez, Tuur Muyldermans, Ståle Nygård, Patricia M. Palagi, Hedi Peterson, Fotis E. Psomopoulos, Vojtech Spiwok, Celia W. G. van Gelder, Allegra Via, Marko Vidak, Daniel Wibberg, Sarah L. Morgan, Gabriella Rustici:
A framework to assess the quality and impact of bioinformatics training across ELIXIR. PLoS Comput. Biol. 16(7) (2020)
2010 – 2019
- 2018
- [i1]Jana Pazúriková, Jaroslav Olha, Ales Krenek, Vojtech Spiwok:
Acceleration of Mean Square Distance Calculations with Floating Close Structure in Metadynamics Simulations. CoRR abs/1801.02362 (2018) - 2016
- [j3]Petr Hosek, Vojtech Spiwok:
Metadyn View: Fast web-based viewer of free energy surfaces calculated by metadynamics. Comput. Phys. Commun. 198: 222-229 (2016) - 2012
- [j2]Vojtech Spiwok, Katarína Hlat-Glembová, Igor Tvaroska, Blanka Králová:
Conformational Free Energy Modeling of Druglike Molecules by Metadynamics in the WHIM Space. J. Chem. Inf. Model. 52(3): 804-813 (2012)
2000 – 2009
- 2005
- [j1]Vojtech Spiwok, Petra Lipovová, Tereza Skálová, Eva Vondrácková, Jan Dohnálek, Jindrich Hasek, Blanka Králová:
Modelling of carbohydrate-aromatic interactions: ab initio energetics and force field performance. J. Comput. Aided Mol. Des. 19(12): 887-901 (2005)
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