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ORCIDRadoslav Krivák
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2020 – today
- 2022
[j7]Christos P. Feidakis
, Radoslav Krivák, David Hoksza, Marian Novotny:
AHoJ: rapid, tailored search and retrieval of apo and holo protein structures for user-defined ligands. Bioinform. 38(24): 5452-5453 (2022)- [j6]Mihaly Varadi, Stephen Anyango, David R. Armstrong, John M. Berrisford, Preeti Choudhary, Mandar S. Deshpande, Nurul Nadzirin, Sreenath Nair, Lukás Pravda, Ahsan Tanweer, Bissan Al-Lazikani, Claudia Andreini, Geoffrey J. Barton, David Bednar, Karel Berka, Tom L. Blundell, Kelly Brock, José María Carazo, Jirí Damborský, Alessia David, Sucharita Dey, Roland L. Dunbrack Jr., Juan Fernández-Recio, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Thomas A. Hopf, David Jakubec, Natarajan Kannan, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Nir London, José Ramón Macías, Mallur Srivatsan Madhusudhan, Debora S. Marks, Lennart Martens, Stuart A McGowan, Jake E. McGreig, Vivek Modi, R. Gonzalo Parra, Gerardo Pepe, Damiano Piovesan, Jaime Prilusky, Valeria Putignano, Leandro G. Radusky, Pathmanaban Ramasamy, Atilio O. Rausch, Nathalie Reuter, Luis A. Rodriguez, Nathan J. Rollins, Antonio Rosato, Pawel Rubach, Luis Serrano, Gulzar Singh, Petr Skoda, Carlos Oscar Sánchez Sorzano, Jan Stourac, Joanna I. Sulkowska, Radka Svobodová Vareková, Natalia Tichshenko, Silvio C. E. Tosatto, Wim F. Vranken, Mark N. Wass, Dandan Xue, Daniel Zaidman, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar:
PDBe-KB: collaboratively defining the biological context of structural data. Nucleic Acids Res. 50(D1): 534-542 (2022) - [j5]David Jakubec, Petr Skoda, Radoslav Krivák, Marian Novotny, David Hoksza:
PrankWeb 3: accelerated ligand-binding site predictions for experimental and modelled protein structures. Nucleic Acids Res. 50(W1): 593-597 (2022) - 2020
- [j4]Mihaly Varadi, John M. Berrisford, Mandar S. Deshpande, Sreenath Nair, Aleksandras Gutmanas, David R. Armstrong, Lukás Pravda, Bissan Al-Lazikani, Stephen Anyango, Geoffrey J. Barton, Karel Berka, Tom L. Blundell, Neera Borkakoti, Jose M. Dana, Sayoni Das, Sucharita Dey, Patrizio Di Micco, Franca Fraternali, Toby J. Gibson, Manuela Helmer-Citterich, David Hoksza, Liang-Chin Huang, Rishabh Jain, Harry Jubb, Christos C. Kannas, Natarajan Kannan, Jaroslav Koca, Radoslav Krivák, Manjeet Kumar, Emmanuel D. Levy, Fábio Madeira, M. S. Madhusudhan, Henry J. Martell, Stuart A. MacGowan, Jake E. McGreig, Saqib Mir, Abhik Mukhopadhyay, Luca Parca, Typhaine Paysan-Lafosse, Leandro G. Radusky, António J. M. Ribeiro, Luis Serrano, Ian Sillitoe, Gulzar Singh, Petr Skoda, Radka Svobodová Vareková, Jonathan D. Tyzack, Alfonso Valencia, Eloy D. Villasclaras-Fernández, Wim F. Vranken, Mark N. Wass, Janet M. Thornton, Michael J. E. Sternberg, Christine A. Orengo, Sameer Velankar:
PDBe-KB: a community-driven resource for structural and functional annotations. Nucleic Acids Res. 48(Database-Issue): D344-D353 (2020)
2010 – 2019
- 2019
- [j3]Lukás Jendele, Radoslav Krivák, Petr Skoda, Marian Novotny, David Hoksza:
PrankWeb: a web server for ligand binding site prediction and visualization. Nucleic Acids Res. 47(Webserver-Issue): W345-W349 (2019) - 2018
- [j2]Radoslav Krivák, David Hoksza:
P2Rank: machine learning based tool for rapid and accurate prediction of ligand binding sites from protein structure. J. Cheminformatics 10(1): 39:1-39:12 (2018) - [c3]Radoslav Krivák, Lukás Jendele, David Hoksza:
Peptide-Binding Site Prediction From Protein Structure via points on the Solvent Accessible Surface. BCB 2018: 645-650 - 2017
- [c2]Radoslav Krivák, David Hoksza, Petr Skoda:
Improving quality of ligand-binding site prediction with Bayesian optimization. BIBM 2017: 2278-2279 - 2015
- [j1]Radoslav Krivák, David Hoksza:
Improving protein-ligand binding site prediction accuracy by classification of inner pocket points using local features. J. Cheminformatics 7: 12 (2015) - [c1]Radoslav Krivák, David Hoksza:
P2RANK: Knowledge-Based Ligand Binding Site Prediction Using Aggregated Local Features. AlCoB 2015: 41-52
Coauthor Index
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