default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDJustin Guinney
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
[i3]Magali Richard, Yuna Blum, Justin Guinney, Gustavo Stolovitzky, Adrien Pavão:
AI Competitions and Benchmarks, Practical issues: Proposals, grant money, sponsors, prizes, dissemination, publicity. CoRR abs/2401.04452 (2024)- 2023
- [j17]Timothy Bergquist
, Thomas Schaffter, Yao Yan, Thomas Yu, Justin Prosser, Jifan Gao, Guanhua Chen, Lukasz Charzewski, Zofia Nawalany, Ivan Brugere, Renata Retkute, Alidivinas Prusokas, Augustinas Prusokas, Yonghwa Choi, Sanghoon Lee, Junseok Choe, Inggeol Lee, Sunkyu Kim, Jaewoo Kang, Sean D. Mooney, Justin Guinney:
Evaluation of crowdsourced mortality prediction models as a framework for assessing artificial intelligence in medicine. J. Am. Medical Informatics Assoc. 31(1): 35-44 (2023) - 2022
- [j16]Jason A. Thomas, Randi E. Foraker, Noa Zamstein, Jon D. Morrow, Philip R. O. Payne, Adam B. Wilcox, Melissa A. Haendel, Christopher G. Chute, Kenneth R. Gersing, Anita Walden, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Hongfang Liu, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Justin Starren, Christine Suver, Chunlei Wu, Davera Gabriel, Stephanie S. Hong, Kristin Kostka, Harold P. Lehmann, Richard A. Moffitt, Michele Morris, Matvey B. Palchuk, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin R. C. Amor, Mark M. Bissell, Marshall Clark, Andrew T. Girvin, Adam M. Lee, Robert T. Miller, Kellie M. Walters, Yooree Chae, Connor Cook, Alexandra Dest, Racquel R. Dietz, Thomas Dillon, Patricia A. Francis, Rafael Fuentes, Alexis Graves, Andrew J. Neumann, Shawn T. O'Neil, Usman Sheikh, Andréa M. Volz, Elizabeth Zampino, Christopher P. Austin, Samuel Bozzette, Mariam Deacy, Nicole Garbarini, Michael G. Kurilla, Sam G. Michael, Joni L. Rutter, Meredith Temple-O'Connor, Katie Rebecca Bradwell, Amin Manna, Nabeel Qureshi, Mary Morrison Saltz, Julie A. McMurry, Carolyn T. Bramante, Jeremy Richard Harper, Wenndy Hernandez, Farrukh M. Koraishy, Federico Mariona, Saidulu Mattapally, Amit Saha, Satyanarayana Vedula, Yujuan Fu, Nisha Mathews, Ofer Mendelevitch:
Demonstrating an approach for evaluating synthetic geospatial and temporal epidemiologic data utility: results from analyzing >1.8 million SARS-CoV-2 tests in the United States National COVID Cohort Collaborative (N3C). J. Am. Medical Informatics Assoc. 29(8): 1350-1365 (2022) - [c9]Chao Yan, Yao Yan, Ziqi Zhang, Zhiyu Wan, Justin Guinney, Sean D. Mooney, Bradley A. Malin:
Assessing Machine Learning Based Generators for Synthetic Electronic Health Records: A Benchmarking. AMIA 2022 - [i2]Yao Yan, Thomas Yu, Kathleen Muenzen, Sijia Liu, Connor Boyle, George Koslowski, Jiaxin Zheng, Nicholas J. Dobbins, Clement Essien, Hongfang Liu, Larsson Omberg, Meliha Yestigen, Bradley Taylor, James A. Eddy, Justin Guinney, Sean D. Mooney, Thomas Schaffter:
The NLP Sandbox: an efficient model-to-data system to enable federated and unbiased evaluation of clinical NLP models. CoRR abs/2206.14181 (2022) - [i1]Chao Yan, Yao Yan, Zhiyu Wan, Ziqi Zhang, Larsson Omberg, Justin Guinney, Sean D. Mooney, Bradley A. Malin:
A Multifaceted Benchmarking of Synthetic Electronic Health Record Generation Models. CoRR abs/2208.01230 (2022) - 2021
- [j15]Xuan Liu, Sara J. C. Gosline, Lance T. Pflieger, Pierre Wallet, Archana Iyer, Justin Guinney, Andrea H. Bild, Jeffrey T. Chang:
Knowledge-based classification of fine-grained immune cell types in single-cell RNA-Seq data. Briefings Bioinform. 22(5) (2021) - [j14]Melissa A. Haendel, Christopher G. Chute, Tellen D. Bennett, David A. Eichmann, Justin Guinney, Warren A. Kibbe, Philip R. O. Payne, Emily R. Pfaff, Peter N. Robinson, Joel H. Saltz, Heidi Spratt, Christine Suver, John Wilbanks, Adam B. Wilcox, Andrew E. Williams, Chunlei Wu, Clair Blacketer, Robert L. Bradford, James J. Cimino, Marshall Clark, Evan W. Colmenares, Patricia A. Francis, Davera Gabriel, Alexis Graves, Raju Hemadri, Stephanie S. Hong, George Hripcsak, Dazhi Jiao, Jeffrey G. Klann, Kristin Kostka, Adam M. Lee, Harold P. Lehmann, Lora Lingrey, Robert T. Miller, Michele Morris, Shawn N. Murphy, Karthik Natarajan, Matvey B. Palchuk, Usman Sheikh, Harold Solbrig, Shyam Visweswaran, Anita Walden, Kellie M. Walters, Griffin M. Weber, Xiaohan Tanner Zhang, Richard L. Zhu, Benjamin R. C. Amor, Andrew T. Girvin, Amin Manna, Nabeel Qureshi, Michael G. Kurilla, Sam G. Michael, Lili M. Portilla, Joni L. Rutter, Christopher P. Austin, Ken R. Gersing:
The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment. J. Am. Medical Informatics Assoc. 28(3): 427-443 (2021) - [j13]Justin Guinney:
Preview of "Interpretable systems biomarkers predict response to immune-checkpoint inhibitors". Patterns 2(8): 100313 (2021) - [j12]Zhaoping Xiong, Minji Jeon, Robert J. Allaway, Jaewoo Kang, Donghyeon Park, Jinhyuk Lee, Hwisang Jeon, Miyoung Ko, Hualiang Jiang, Mingyue Zheng, Aik Choon Tan, Xindi Guo, Multi-Targeting Drug DREAM Challenge Community, Kristen K. Dang, Alex Tropsha, Chana Hecht, Tirtha K. Das, Heather A. Carlson, Ruben Abagyan, Justin Guinney, Avner Schlessinger, Ross L. Cagan:
Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge. PLoS Comput. Biol. 17(9) (2021) - [c8]Feifan Liu, Noha Sharafeldin, Vithal Madhira, Katie R. Bradwell, Qianqian Song, Benjamin Bates, Yu R. Shao, Jing Su, Alfred Anzalone, Timothym Bergquist, Sarah Cutrona, Ben S. Gerber, Peter N. Robinson, Justin Guinney, Umit Topaloglu:
COVID-19 Mortality Prediction among Patients with Cancer Using a Large National Cohort. AMIA 2021 - [c7]Yao Yan, Thomas Schaffter, Timothy Bergquist, Thomas Yu, Justin Prosser, Sean D. Mooney, Justin Guinney:
A Continuous Crowd-sourced Challenge for Benchmarking COVID-19 Health Outcome Prediction. AMIA 2021 - [c6]Lara M. Mangravite, Sean D. Mooney, Iddo Friedberg, Justin Guinney:
Establishing the reliability of algorithms. PSB 2021 - 2020
- [j11]Timothy Bergquist, Yao Yan, Thomas Schaffter, Thomas Yu, Vikas Pejaver, Noah Hammarlund, Justin Prosser, Justin Guinney, Sean D. Mooney:
Piloting a model-to-data approach to enable predictive analytics in health care through patient mortality prediction. J. Am. Medical Informatics Assoc. 27(9): 1393-1400 (2020) - [c5]Justin Guinney, Subha Madhavan, Melissa A. Haendel, Alex H. Wagner, Ratna R. Thangudu:
Global research consortia and data harmonization projects drive the clinical interpretation of cancers. AMIA 2020
2010 – 2019
- 2018
- [j10]Robert J. Allaway, Salvatore La Rosa, Justin Guinney, Sara J. C. Gosline:
Probing the chemical-biological relationship space with the Drug Target Explorer. J. Cheminformatics 10(1): 41:1-41:14 (2018) - 2016
- [j9]Frederic Commo, Justin Guinney, Charles Ferté, Brian M. Bot, Celine Lefebvre, Jean-Charles Soria, Fabrice André:
rCGH: a comprehensive array-based genomic profile platform for precision medicine. Bioinform. 32(9): 1402-1404 (2016) - [c4]Elias Chaibub Neto, Brian M. Bot, Thanneer M. Perumal, Larsson Omberg, Justin Guinney, Mike Kellen, Arno Klein, Stephen H. Friend, Andrew D. Trister:
Personalized Hypothesis Tests for Detecting Medication Response in Parkinson Disease Patients Using iPhone Sensor Data. PSB 2016: 273-284 - 2015
- [j8]Benedict Paten, Mark Diekhans, Brian J. Druker, Stephen H. Friend, Justin Guinney, Nadine Gassner, Mitchell Guttman, W. James Kent, Patrick Mantey, Adam A. Margolin, Matt Massie, Adam M. Novak, Frank A. Nothaft, Lior Pachter, David A. Patterson, Maciej Smuga-Otto, Joshua M. Stuart, Laura J. van't Veer, Barbara J. Wold, David Haussler:
The NIH BD2K center for big data in translational genomics. J. Am. Medical Informatics Assoc. 22(6): 1143-1147 (2015) - [c3]In Sock Jang, Rodrigo Dienstmann, Adam A. Margolin, Justin Guinney:
Stepwise Group Sparse Regression (SGSR): Gene-Set-Based Pharmacogenomic Predictive Models with Stepwise Selection of Functional Priors. Pacific Symposium on Biocomputing 2015: 32-43 - 2014
- [c2]In Sock Jang, Elias Chaibub Neto, Justin Guinney, Stephen H. Friend, Adam A. Margolin:
Systematic Assessment of Analytical Methods for Drug Sensitivity Prediction from Cancer Cell Line Data. Pacific Symposium on Biocomputing 2014: 63-74 - 2013
- [j7]Sonja Hänzelmann, Robert Castelo, Justin Guinney:
GSVA: gene set variation analysis for microarray and RNA-Seq data. BMC Bioinform. 14: 7 (2013) - [j6]Erhan Bilal, Janusz Dutkowski, Justin Guinney, In Sock Jang, Benjamin A. Logsdon, Gaurav Pandey, Benjamin A. Sauerwine, Yishai Shimoni, Hans Kristian Moen Vollan, Brigham H. Mecham, Oscar M. Rueda, Jorg Tost, Christina Curtis, Mariano J. Alvarez, Vessela N. Kristensen, Samuel Aparicio, Anne-Lise Børresen-Dale, Carlos Caldas, Andrea Califano, Stephen H. Friend, Trey Ideker, Eric E. Schadt, Gustavo A. Stolovitzky, Adam A. Margolin:
Improving Breast Cancer Survival Analysis through Competition-Based Multidimensional Modeling. PLoS Comput. Biol. 9(5) (2013) - 2012
- [j5]Chia-Ling Huang, John Lamb, Leonid Chindelevitch, Jarek Kostrowicki, Justin Guinney, Charles DeLisi, Daniel Ziemek:
Correlation set analysis: detecting active regulators in disease populations using prior causal knowledge. BMC Bioinform. 13: 46 (2012) - 2011
- [j4]Justin Guinney, Qiang Wu, Sayan Mukherjee:
Estimating variable structure and dependence in multitask learning via gradients. Mach. Learn. 83(3): 265-287 (2011) - 2010
- [j3]Qiang Wu, Justin Guinney, Mauro Maggioni, Sayan Mukherjee:
Learning Gradients: Predictive Models that Infer Geometry and Statistical Dependence. J. Mach. Learn. Res. 11: 2175-2198 (2010)
2000 – 2009
- 2009
- [b1]Justin Guinney:
The Geometry of Cancer. Duke University, Durham, NC, USA, 2009 - 2008
- [j2]Alan P. Boyle, Justin Guinney, Gregory E. Crawford, Terrence S. Furey:
F-Seq: a feature density estimator for high-throughput sequence tags. Bioinform. 24(21): 2537-2538 (2008) - [j1]Elena J. Edelman, Justin Guinney, Jen-Tsan A. Chi, Phillip G. Febbo, Sayan Mukherjee:
Modeling Cancer Progression via Pathway Dependencies. PLoS Comput. Biol. 4(2) (2008) - 2006
- [c1]Elena J. Edelman, Alessandro Porrello, Justin Guinney, Bala Balakumaran, Andrea Bild, Phillip G. Febbo, Sayan Mukherjee:
Analysis of sample set enrichment scores: assaying the enrichment of sets of genes for individual samples in genome-wide expression profiles. ISMB (Supplement of Bioinformatics) 2006: 122-116
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:08 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
