User:Aogarlid: Difference between revisions
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Contributing to the Gene Wiki Project, improving articles on mitochondrial genes and proteins to make current biomedical knowledge more findable and accessible to the general public and citizen scientists. |
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| full name = Anders Olav Garlid, PhD |
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| image = HawthorneBridge-Pano.jpg |
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| job title = Postdoctoral Scholar |
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| organization = UCLA Medical & Imaging Informatics |
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| short quote = "Reason can be used only when looking critically back." -- [[Peter D. Mitchell]] |
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| about me = I am a postdoctoral scholar with the Medical & Imaging Informatics (MII) group at the [[University of California, Los Angeles]] in the Departments of Radiology and Bioengineering. I earned my Bachelor's degree in biochemistry and Master's degree in Biology at [[Portland State University]], where I developed an interest in [[mitochondrial]] physiology and cellular signaling and became involved in cardiovascular research<ref>{{cite journal |last1=Foster |first1=DB |last2=Ho |first2=AS |last3=Rucker |first3=J |last4=Garlid |first4=AO |last5=Chen |first5=L |last6=Sidor |first6=A |last7=Garlid |first7=KD |last8=O'Rourke |first8=B |title=Mitochondrial ROMK channel is a molecular component of mitoK(ATP). |journal=Circulation research |date=3 August 2012 |volume=111 |issue=4 |pages=446-54 |doi=10.1161/CIRCRESAHA.112.266445 |pmid=22811560}}</ref><ref>{{cite journal |last1=Garlid |first1=AO |last2=Jaburek |first2=M |last3=Jacobs |first3=JP |last4=Garlid |first4=KD |title=Mitochondrial reactive oxygen species: which ROS signals cardioprotection? |journal=American journal of physiology. Heart and circulatory physiology |date=1 October 2013 |volume=305 |issue=7 |pages=H960-8 |doi=10.1152/ajpheart.00858.2012 |pmid=23913710}}</ref>. I earned my PhD in Molecular, Cellular & Integrative Physiology (MCIP) at UCLA in 2019, where my studies shifted to [[biomedical informatics]]<ref>{{cite journal |last1=Garlid |first1=AO |last2=Polson |first2=JS |last3=Garlid |first3=KD |last4=Hermjakob |first4=H |last5=Ping |first5=P |title=Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome. |journal=Handbook of experimental pharmacology |date=2017 |volume=240 |pages=377-401 |doi=10.1007/164_2016_93 |pmid=27995389}}</ref><ref>{{cite journal |last1=Wang |first1=J |last2=Choi |first2=H |last3=Chung |first3=NC |last4=Cao |first4=Q |last5=Ng |first5=DCM |last6=Mirza |first6=B |last7=Scruggs |first7=SB |last8=Wang |first8=D |last9=Garlid |first9=AO |last10=Ping |first10=P |title=Integrated Dissection of Cysteine Oxidative Post-translational Modification Proteome During Cardiac Hypertrophy. |journal=Journal of proteome research |date=7 December 2018 |volume=17 |issue=12 |pages=4243-4257 |doi=10.1021/acs.jproteome.8b00372 |pmid=30141336}}</ref> and [[text-mining]]<ref>{{cite journal |last1=Caufield |first1=JH |last2=Liem |first2=DA |last3=Garlid |first3=AO |last4=Zhou |first4=Y |last5=Watson |first5=K |last6=Bui |first6=AAT |last7=Wang |first7=W |last8=Ping |first8=P |title=A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts. |journal=Journal of visualized experiments : JoVE |date=20 September 2018 |issue=139 |doi=10.3791/58392 |pmid=30295669}}</ref><ref>{{cite journal |last1=Caufield |first1=JH |last2=Zhou |first2=Y |last3=Garlid |first3=AO |last4=Setty |first4=SP |last5=Liem |first5=DA |last6=Cao |first6=Q |last7=Lee |first7=JM |last8=Murali |first8=S |last9=Spendlove |first9=S |last10=Wang |first10=W |last11=Zhang |first11=L |last12=Sun |first12=Y |last13=Bui |first13=A |last14=Hermjakob |first14=H |last15=Watson |first15=KE |last16=Ping |first16=P |title=A reference set of curated biomedical data and metadata from clinical case reports. |journal=Scientific data |date=20 November 2018 |volume=5 |pages=180258 |doi=10.1038/sdata.2018.258 |pmid=30457569}}</ref> with a focus on mitochondrial diseases such as [[Barth syndrome]] and the associated [[tafazzin]] protein<ref>{{cite journal |last1=Garlid |first1=AO |last2=Schaffer |first2=CT |last3=Kim |first3=J |last4=Bhatt |first4=H |last5=Guevara-Gonzalez |first5=V |last6=Ping |first6=P |title=TAZ encodes tafazzin, a transacylase essential for cardiolipin formation and central to the etiology of Barth syndrome. |journal=Gene |date=5 February 2020 |volume=726 |pages=144148 |doi=10.1016/j.gene.2019.144148 |pmid=31647997}}</ref>. |
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| about my work = Currently working on a [[COVID-19]] literature retrieval tool for infectious disease clinicians at UCLA. Developing models to identify patients at risk of swift decline in [[chronic kidney disease]] (CKD) and those at risk of developing [[acute kidney injury]] (AKI). Contributing to the [[Gene Wiki | Gene Wiki Project]], improving articles on mitochondrial genes and proteins to make current biomedical knowledge available to the general public and citizen scientists, and supporting the FAIR doctrine to make scientific knowledge Findable, Accessible, Interoperable, and Reusable (FAIR).<ref>{{cite journal |last1=Wilkinson |first1=Mark |last2=Dumontier |first2=Michel |title=The FAIR Guiding Principles for scientific data management and stewardship |journal=Scientific Data |date=15 March 2016 |volume=3 |doi=10.1038/sdata.2016.18 |pmid=26978244}}</ref> |
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| contact me = [[User_talk:Aogarlid | aogarlid user talk]] page |
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== References == |
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{{reflist}} |
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Latest revision as of 08:53, 15 September 2020
 | This is a Wikipedia user page. This is not an encyclopedia article or the talk page for an encyclopedia article. If you find this page on any site other than Wikipedia, you are viewing a mirror site. Be aware that the page may be outdated and that the user whom this page is about may have no personal affiliation with any site other than Wikipedia. The original page is located at https://en.wikipedia.org/wiki/User:Aogarlid. |
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References
[edit]- ^ Foster, DB; Ho, AS; Rucker, J; Garlid, AO; Chen, L; Sidor, A; Garlid, KD; O'Rourke, B (3 August 2012). "Mitochondrial ROMK channel is a molecular component of mitoK(ATP)". Circulation research. 111 (4): 446–54. doi:10.1161/CIRCRESAHA.112.266445. PMID 22811560.
- ^ Garlid, AO; Jaburek, M; Jacobs, JP; Garlid, KD (1 October 2013). "Mitochondrial reactive oxygen species: which ROS signals cardioprotection?". American journal of physiology. Heart and circulatory physiology. 305 (7): H960-8. doi:10.1152/ajpheart.00858.2012. PMID 23913710.
- ^ Garlid, AO; Polson, JS; Garlid, KD; Hermjakob, H; Ping, P (2017). "Equipping Physiologists with an Informatics Tool Chest: Toward an Integerated Mitochondrial Phenome". Handbook of experimental pharmacology. 240: 377–401. doi:10.1007/164_2016_93. PMID 27995389.
- ^ Wang, J; Choi, H; Chung, NC; Cao, Q; Ng, DCM; Mirza, B; Scruggs, SB; Wang, D; Garlid, AO; Ping, P (7 December 2018). "Integrated Dissection of Cysteine Oxidative Post-translational Modification Proteome During Cardiac Hypertrophy". Journal of proteome research. 17 (12): 4243–4257. doi:10.1021/acs.jproteome.8b00372. PMID 30141336.
- ^ Caufield, JH; Liem, DA; Garlid, AO; Zhou, Y; Watson, K; Bui, AAT; Wang, W; Ping, P (20 September 2018). "A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts". Journal of visualized experiments : JoVE (139). doi:10.3791/58392. PMID 30295669.
- ^ Caufield, JH; Zhou, Y; Garlid, AO; Setty, SP; Liem, DA; Cao, Q; Lee, JM; Murali, S; Spendlove, S; Wang, W; Zhang, L; Sun, Y; Bui, A; Hermjakob, H; Watson, KE; Ping, P (20 November 2018). "A reference set of curated biomedical data and metadata from clinical case reports". Scientific data. 5: 180258. doi:10.1038/sdata.2018.258. PMID 30457569.
- ^ Garlid, AO; Schaffer, CT; Kim, J; Bhatt, H; Guevara-Gonzalez, V; Ping, P (5 February 2020). "TAZ encodes tafazzin, a transacylase essential for cardiolipin formation and central to the etiology of Barth syndrome". Gene. 726: 144148. doi:10.1016/j.gene.2019.144148. PMID 31647997.
- ^ Wilkinson, Mark; Dumontier, Michel (15 March 2016). "The FAIR Guiding Principles for scientific data management and stewardship". Scientific Data. 3. doi:10.1038/sdata.2016.18. PMID 26978244.
