Population data for 12 Y-chromosome STR loci in a sample from Honduras.

Matamoros M; Yurrebaso I; Gusmão L; García O

doi:10.1016/j.legalmed.2009.06.001

Population data for 12 Y-chromosome STR loci in a sample from Honduras.

Affiliations

1. Dirección de Medicina Forense, Ministerio Público, Tegucigalpa, Honduras.
Authors
Matamoros M¹
(1 author)

ORCIDs linked to this article

Legal Medicine (Tokyo, Japan), 22 Jul 2009, 11(5):251-255
https://doi.org/10.1016/j.legalmed.2009.06.001 PMID: 19628418

Abstract

Haplotype, allele frequencies and population data of 12 Y-chromosome STR loci DYS19, DYS385, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438 and DYS439 were determined from a sample of 128 unrelated male individuals from Honduras, Central America. A total of 112 haplotypes were identified by the 12 Y-STR loci of which 98 were unique. The haplotype diversity (98.99%) and the proportion of different haplotypes (87.50%) were estimated. Genetic distances were calculated between Honduras and other populations from Southern and Central America, Europe and Africa. The analysis of a Multi Dimensional Scaling (MDS) plot, based on pairwise R(ST) genetic distances, allowed to conclude that Honduras is highly differentiated from the African samples (0.343< or =R(ST)< or =0.620; P=0.000) and from a Native American sample from Argentina, Tobas (R(ST)=0.210, P=0.000). Honduras showed a lower genetic distance to the European cluster (composed by European and South American general population samples from Brazil, Argentina, Colombia and Venezuela) than to the Central American cluster (Mexico and El Salvador).

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Population data for 12 Y-chromosome STR loci in a sample from Honduras.

Affiliations

Authors

ORCIDs linked to this article

Abstract

Full text links

References

Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material.

DNA commission of the International Society of Forensic Genetics: recommendations on forensic analysis using Y-chromosome STRs.

DNA Commission of the International Society of Forensic Genetics (ISFG): an update of the recommendations on the use of Y-STRs in forensic analysis.

Title not supplied

Arlequin ver. 3.0: an integrated software package for population genetics data analysis

Y-chromosomal STR haplotypes in a Northeast Italian population sample using 17plex loci PCR assay.

Y-STR typing of an Austrian population sample using a 17-loci multiplex PCR assay.

Population data for Y-chromosome haplotypes defined by 17 STRs (AmpFlSTR YFiler) in Portugal.

Population and segregation data on 17 Y-STRs: results of a GEP-ISFG collaborative study.

A Basque Country autochthonous population study of 11 Y-chromosome STR loci.

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Smart citations by scite.ai
Explore citation contexts and check if this article has been supported or disputed.
https://scite.ai/reports/10.1016/j.legalmed.2009.06.001

Article citations

Exploring the Y Chromosomal Ancestry of Modern Panamanians.

Genetic Diversity in the Lesser Antilles and Its Implications for the Settlement of the Caribbean Basin.

Y-STR diversity and sex-biased gene flow among Caribbean populations.

Population data for 12 Y-chromosome STR loci in a sample from El Salvador.

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Population data for 12 Y-chromosome STR loci in a sample from Honduras.

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Title not supplied

Arlequin ver. 3.0: an integrated software package for population genetics data analysis

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