Successive waves of fixation of B1 variants in rodent lineage history.

Quentin Y

doi:10.1007/bf02103425

Abstract

A new method of analyzing phylogenetic relations among members of sequence family (Quentin 1988) discriminates at least six possible B1 subfamilies in the mouse genome. Several additional and independent observations suggest that these groupings have evolutionary significance, and that successive waves of fixation of new variants occur during rodent lineage history. We have reason to believe that, in a genome, the founder sequences of different families of retroposons are in competition with regard to the amplification/fixation process.

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Successive waves of fixation of B1 variants in rodent lineage history.

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Abstract

Full text links

References

Benzecri JP (1969) Statistical analysis as a tool to make patterns emerge from data. In: Watanabe S (ed) Methodologies of pattern recognition. Academic Press, New York, p 35

The GenBank genetic sequence databank.

DNA methylation and the frequency of CpG in animal DNA.

Sources and evolution of human Alu repeated sequences.

A B1 repetitive sequence near the mouse beta-major globin gene.

Integration site preferences of the Alu family and similar repetitive DNA sequences.

ACNUC: a nucleic acid sequence data base and analysis system.

System analysis and nucleic acid sequence banks.

Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.

Higgins DG, Gouy M (1987) Interfacing similarity search software with the sequence retrieval system ACNUC. CABIOS 3:239–241

Citations & impact

Impact metrics

Citations of article over time

Article citations

A noncoding RNA containing a SINE-B1 motif associates with meiotic metaphase chromatin and has an indispensable function during spermatogenesis.

Inference of transposable element ancestry.

Elaborate security TRAINing to fight against expression of genomic junk.

p53 cooperates with DNA methylation and a suicidal interferon response to maintain epigenetic silencing of repeats and noncoding RNAs.

Origin and evolution of SINEs in eukaryotic genomes.

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Search life-sciences literature (45,104,206 articles, preprints and more)

Successive waves of fixation of B1 variants in rodent lineage history.

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References

Benzecri JP (1969) Statistical analysis as a tool to make patterns emerge from data. In: Watanabe S (ed) Methodologies of pattern recognition. Academic Press, New York, p 35

Higgins DG, Gouy M (1987) Interfacing similarity search software with the sequence retrieval system ACNUC. CABIOS 3:239–241

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