Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system.

Ikemura T

doi:10.1016/0022-2836(81)90003-6

Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system.

Ikemura T

Journal of Molecular Biology, 01 Sep 1981, 151(3):389-409
https://doi.org/10.1016/0022-2836(81)90003-6 PMID: 6175758

Abstract

No abstract provided.

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References

Articles referenced by this article (76)

Gene F of bacteriophage phiX174. Correlation of nucleotide sequences from the DNA and amino acid sequences from the gene product.
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Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: a proposal for a synonymous codon choice that is optimal for the E. coli translational system.

Abstract

Full text links

References

Gene F of bacteriophage phiX174. Correlation of nucleotide sequences from the DNA and amino acid sequences from the gene product.

Leucine tRNA(1) from HisT mutant of Salmonella typhimurium lacks two pseudouridines.

Nucleotide sequence analysis of the chloramphenicol resistance transposon Tn9.

The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli.

Nucleotide sequence of the gene ompA coding the outer membrane protein II of Escherichia coli K-12.

Nucleotide sequence of bacteriophage fd DNA.

Protein identifications of O'Farrell two-dimensional gels: locations of 81 Escherichia coli proteins.

Sequence of the lactose permease gene.

Adaptation of iso-tRNA concentration to mRNA codon frequency in the eukaryote cell.

Studies on tRNA adaptation, tRNA turnover, precursor tRNA and tRNA gene distribution in Bombyx mori by using two-dimensional polyacrylamide gel electrophoresis.

Citations & impact

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Smart citations by scite.ai
Explore citation contexts and check if this article has been supported or disputed.
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Article citations

GenRCA: a user-friendly rare codon analysis tool for comprehensive evaluation of codon usage preferences based on coding sequences in genomes.

Strangers in a foreign land: 'Yeastizing' plant enzymes.

Protein Fold Usages in Ribosomes: Another Glance to the Past.

Differentially used codons among essential genes in bacteria identified by machine learning-based analysis.

The Effects of Codon Usage on Protein Structure and Folding.

Other citations

Wikipedia

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