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Published online 2024 Feb 26. doi: 10.1186/s40168-023-01739-z
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Fig. 5

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Phylogenetic tree of the four Methanosarcina populations detected in the paddy soil slurries (a) and their relative abundance dynamics over incubation time (b). a The neighbor-joining tree was constructed based on near full-length 16S rRNA sequences (> 1200 bp) assembled by EMIRGE from the metatranscriptomic datasets (415 sequences) and reference sequences extracted from Methanosarcina genomes in GTDB. b The relative abundance dynamics of the four distinct Methanosarcina populations (Groups I to IV) were inferred from the assembled 16S rRNA sequences. Data are means ± SE (n = 3)

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