| PMC full text: |
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Table 2
Search algorithms used on Uni3p sequence
| Algorithm | Result | Reference |
|---|---|---|
| BLAST | First 398 sequences retrieved were tubulins. Best match: sum (P) = 6.2 × 10−41 | Altschul et al. (1990) |
| FASTA | First 190 sequences retrieved were tubulins. Best match: Z score = 1.2 × 10−21 | Pearson and Lipman (1988) |
| BLOCKS | Match for 4/4 tubulin BLOCKS. Score = 1446 (P) < 1.3 × 10−9 | Henikoff and Henikoff (1994) |
| PROSITE | Match only to tubulin site [SAG]-G-G-T-G-[SA] | Bairoch (1993) |
| Pfam-AHMM | (P) = 2−140 of alignment to 198 full-length tubulin sequences by chance | Sonnhammer et al. (1997) |