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Search life-sciences literature (45,103,589 articles, preprints and more)

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Nasal microbionts differentially colonize and elicit cytokines in human nasal epithelial organoids
Boyd AI, Kafer LA, Escapa IF, Kambal A, Tariq H, Hilsenbeck SG, Nguyen-Phuc H, Rajan A, Lensmire JM, Patras KA, Piedra PA, Blutt SE, Lemon KP
bioRxiv, 25 Sep 2024
Cited by: 0 articles | PPR: PPR916015
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Metabolic capabilities are highly conserved among human nasal-associatedCorynebacteriumspecies in pangenomic analyses
Tran TH, Escapa IF, Roberts AQ, Gao W, Obawemimo AC, Segre JA, Kong HH, Conlan S, Kelly MS, Lemon KP
bioRxiv, 05 Jun 2023
Cited by: 0 articles | PPR: PPR671412
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Development and scaling of a sequencing pipeline for genomic surveillance of SARS-CoV-2 in New York City
Hammerling MJ, Kang SC, Ward W, Escapa IF, Bugga P, Del Castillo C, Hopkins M, Chase S, Rey S, Law D, Carpio A, Nelson K, Chhabria S, Gupta S, Rivera T, Laurent JM, Hao H, Lee HH
medRxiv, 27 May 2022
Cited by: 0 articles | PPR: PPR499303
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This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
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Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome.
Flores Ramos S, Brugger SD, Escapa IF, Skeete CA, Cotton SL, Eslami SM, Gao W, Bomar L, Tran TH, Jones DS, Minot S, Roberts RJ, Johnston CD, Lemon KP
mSystems, 6(5):e0042521, 21 Sep 2021
Cited by: 9 articles | PMID: 34546072 | PMCID: PMC8547433
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Genomic Stability and Genetic Defense Systems inDolosigranulum pigruma Candidate Beneficial Bacterium from the Human Microbiome
Ramos SF, Brugger SD, Escapa IF, Skeete CA, Cotton SL, Eslami SM, Gao W, Bomar L, Tran TH, Jones DS, Minot S, Roberts RJ, Johnston CD, Lemon KP
bioRxiv, 18 Apr 2021
Cited by: 0 articles | PPR: PPR313303
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Dolosigranulum pigrum Cooperation and Competition in Human Nasal Microbiota.
Brugger SD, Eslami SM, Pettigrew MM, Escapa IF, Henke MT, Kong Y, Lemon KP
mSphere, 5(5):e00852-20, 09 Sep 2020
Cited by: 58 articles | PMID: 32907957 | PMCID: PMC7485692
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Dolosigranulum pigrum cooperation and competition in human nasal microbiota
Brugger SD, Eslami SM, Pettigrew MM, Escapa IF, Henke MT, Kong Y, Lemon KP
bioRxiv, 21 Jun 2019
Cited by: 0 articles | PPR: PPR83326
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Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets
Escapa IF, Huang Y, Chen T, Lin M, Kokaras A, Dewhirst FE, Lemon KP
bioRxiv, 04 Oct 2019
Cited by: 0 articles | PPR: PPR94864
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New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract.
Escapa IF, Chen T, Huang Y, Gajare P, Dewhirst FE, Lemon KP
mSystems, 3(6):e00187-18, 01 Nov 2018
Cited by: 260 articles | PMID: 30534599 | PMCID: PMC6280432
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New insights into human nostril microbiome from the expanded Human Oral Microbiome Database (eHOMD): a resource for the microbiome of the human aerodigestive tract
Escapa IF, Chen T, Huang Y, Gajare P, Dewhirst FE, Lemon KP
bioRxiv, 14 Jun 2018
Cited by: 1 article | PPR: PPR9637
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A holistic view of polyhydroxyalkanoate metabolism in Pseudomonas putida.
Prieto A, Escapa IF, Martínez V, Martínez V, Dinjaski N, Herencias C, de la Peña F, Tarazona N, Revelles O
Environ Microbiol, 18(2):341-357, 11 Feb 2015
Cited by: 82 articles | PMID: 25556983
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Propionibacterium-produced coproporphyrin III induces Staphylococcus aureus aggregation and biofilm formation.
Wollenberg MS, Claesen J, Escapa IF, Aldridge KL, Fischbach MA, Lemon KP
mBio, 5(4):e01286-14, 22 Jul 2014
Cited by: 59 articles | PMID: 25053784 | PMCID: PMC4120196
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New insights on the reorganization of gene transcription in Pseudomonas putida KT2440 at elevated pressure.
Follonier S, Escapa IF, Fonseca PM, Henes B, Panke S, Zinn M, Prieto MA
Microb Cell Fact, 12:30, 28 Mar 2013
Cited by: 17 articles | PMID: 23537069 | PMCID: PMC3621253
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The polyhydroxyalkanoate metabolism controls carbon and energy spillage in Pseudomonas putida.
Escapa IF, García JL, Bühler B, Blank LM, Prieto MA
Environ Microbiol, 14(4):1049-1063, 09 Jan 2012
Cited by: 51 articles | PMID: 22225632
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The metabolic response of P. putida KT2442 producing high levels of polyhydroxyalkanoate under single- and multiple-nutrient-limited growth: highlights from a multi-level omics approach.
Poblete-Castro I, Escapa IF, Jäger C, Puchalka J, Lam CM, Schomburg D, Prieto MA, Martins dos Santos VA
Microb Cell Fact, 11:34, 20 Mar 2012
Cited by: 60 articles | PMID: 22433058 | PMCID: PMC3325844
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The role of GlpR repressor in Pseudomonas putida KT2440 growth and PHA production from glycerol.
Escapa IF, del Cerro C, García JL, Prieto MA
Environ Microbiol, 15(1):93-110, 31 May 2012
Cited by: 45 articles | PMID: 22646161
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Nucleoid-associated PhaF phasin drives intracellular location and segregation of polyhydroxyalkanoate granules in Pseudomonas putida KT2442.
Galán B, Dinjaski N, Maestro B, de Eugenio LI, Escapa IF, Sanz JM, García JL, Prieto MA
Mol Microbiol, 79(2):402-418, 16 Nov 2010
Cited by: 70 articles | PMID: 21219460
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Disruption of β-oxidation pathway in Pseudomonas putida KT2442 to produce new functionalized PHAs with thioester groups.
Escapa IF, Morales V, Martino VP, Pollet E, Avérous L, García JL, Prieto MA
Appl Microbiol Biotechnol, 89(5):1583-1598, 26 Jan 2011
Cited by: 34 articles | PMID: 21267558
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The PhaD regulator controls the simultaneous expression of the pha genes involved in polyhydroxyalkanoate metabolism and turnover in Pseudomonas putida KT2442.
de Eugenio LI, Galán B, Escapa IF, Maestro B, Sanz JM, García JL, Prieto MA
Environ Microbiol, 12(6):1591-1603, 14 Apr 2010
Cited by: 40 articles | PMID: 20406286
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The turnover of medium-chain-length polyhydroxyalkanoates in Pseudomonas putida KT2442 and the fundamental role of PhaZ depolymerase for the metabolic balance.
de Eugenio LI, Escapa IF, Morales V, Dinjaski N, Galán B, García JL, Prieto MA
Environ Microbiol, 12(1):207-221, 29 Sep 2009
Cited by: 70 articles | PMID: 19788655
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1-20 of 20 results

Search life-sciences literature (45,103,589 articles, preprints and more)

Search results

Nasal microbionts differentially colonize and elicit cytokines in human nasal epithelial organoids

Metabolic capabilities are highly conserved among human nasal-associatedCorynebacteriumspecies in pangenomic analyses

Development and scaling of a sequencing pipeline for genomic surveillance of SARS-CoV-2 in New York City

Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome.

Genomic Stability and Genetic Defense Systems inDolosigranulum pigruma Candidate Beneficial Bacterium from the Human Microbiome

Dolosigranulum pigrum Cooperation and Competition in Human Nasal Microbiota.

Dolosigranulum pigrum cooperation and competition in human nasal microbiota

Construction of habitat-specific training sets to achieve species-level assignment in 16S rRNA gene datasets

New Insights into Human Nostril Microbiome from the Expanded Human Oral Microbiome Database (eHOMD): a Resource for the Microbiome of the Human Aerodigestive Tract.

New insights into human nostril microbiome from the expanded Human Oral Microbiome Database (eHOMD): a resource for the microbiome of the human aerodigestive tract

A holistic view of polyhydroxyalkanoate metabolism in Pseudomonas putida.

Propionibacterium-produced coproporphyrin III induces Staphylococcus aureus aggregation and biofilm formation.

New insights on the reorganization of gene transcription in Pseudomonas putida KT2440 at elevated pressure.

The polyhydroxyalkanoate metabolism controls carbon and energy spillage in Pseudomonas putida.

The metabolic response of P. putida KT2442 producing high levels of polyhydroxyalkanoate under single- and multiple-nutrient-limited growth: highlights from a multi-level omics approach.

The role of GlpR repressor in Pseudomonas putida KT2440 growth and PHA production from glycerol.

Nucleoid-associated PhaF phasin drives intracellular location and segregation of polyhydroxyalkanoate granules in Pseudomonas putida KT2442.

Disruption of β-oxidation pathway in Pseudomonas putida KT2442 to produce new functionalized PHAs with thioester groups.

The PhaD regulator controls the simultaneous expression of the pha genes involved in polyhydroxyalkanoate metabolism and turnover in Pseudomonas putida KT2442.

The turnover of medium-chain-length polyhydroxyalkanoates in Pseudomonas putida KT2442 and the fundamental role of PhaZ depolymerase for the metabolic balance.

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