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Search life-sciences literature (45,104,931 articles, preprints and more)

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Cluster-efficient pangenome graph construction with nf-core/pangenome.
Heumos S, Heuer ML, Hanssen F, Heumos L, Guarracino A, Heringer P, Ehmele P, Prins P, Garrison E, Nahnsen S
Bioinformatics, 40(11):btae609, 01 Nov 2024
Cited by: 0 articles | PMID: 39400346 | PMCID: PMC11568064
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Genotype List String 1.1: Extending the Genotype List String grammar for describing HLA and Killer-cell Immunoglobulin-like Receptor genotypes.
Mack SJ, Schefzyk D, Millius RP, Maiers M, Hollenbach JA, Pollack J, Heuer ML, Gragert L, Spellman SR, Guethlein LA, Schneider J, Bochtler W, Eberhard HP, Robinson J, Marsh SGE, Schmidt AH, Hofmann JA, Sauter J
HLA, 102(2):206-212, 07 Jun 2023
Cited by: 2 articles | PMID: 37286192 | PMCID: PMC10524834
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Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation sequencing.
Mack SJ, Milius RP, Gifford BD, Sauter J, Hofmann J, Osoegawa K, Robinson J, Groeneweg M, Turenchalk GS, Adai A, Holcomb C, Rozemuller EH, Penning MT, Heuer ML, Wang C, Salit ML, Schmidt AH, Parham PR, Müller C, [...] Maiers M
Hum Immunol, 76(12):954-962, 25 Sep 2015
Cited by: 12 articles | PMID: 26407912 | PMCID: PMC4674382
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The impact of Docker containers on the performance of genomic pipelines.
Di Tommaso P, Palumbo E, Chatzou M, Prieto P, Heuer ML, Notredame C
PeerJ, 3:e1273, 24 Sep 2015
Cited by: 42 articles | PMID: 26421241 | PMCID: PMC4586803
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The impact of Docker containers on the performance of genomic pipelines
Di Tommaso P, Palumbo E, Chatzou M, Prieto P, Heuer ML, Notredame C
PeerJ Preprints, 12 Jun 2015
Cited by: 0 articles | PPR: PPR96637
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Minimum Information for Reporting Next Generation Sequence Genotyping (MIRING): Guidelines for Reporting HLA and KIR Genotyping via Next Generation Sequencing
Mack SJ, Milius RP, Gifford BD, Sauter J, Hofmann J, Osoegawa K, Robinson J, Groeneweg M, Turenchalk GS, Adai A, Holcomb C, Rozemuller EH, Penning MT, Heuer ML, Wang C, Salit ML, Schmidt AH, Parham PR, Müller C, [...] Maiers M
bioRxiv, 16 Feb 2015
Cited by: 0 articles | PPR: PPR31353
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Genotype List String: a grammar for describing HLA and KIR genotyping results in a text string.
Milius RP, Mack SJ, Hollenbach JA, Pollack J, Heuer ML, Gragert L, Spellman S, Guethlein LA, Trachtenberg EA, Cooley S, Bochtler W, Mueller CR, Robinson J, Marsh SG, Maiers M
Tissue Antigens, 82(2):106-112, 01 Aug 2013
Cited by: 32 articles | PMID: 23849068 | PMCID: PMC3715123
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BioJava: an open-source framework for bioinformatics in 2012.
Prlić A, Yates A, Bliven SE, Rose PW, Jacobsen J, Troshin PV, Chapman M, Gao J, Koh CH, Foisy S, Holland R, Rimsa G, Heuer ML, Brandstätter-Müller H, Bourne PE, Willis S
Bioinformatics, 28(20):2693-2695, 09 Aug 2012
Cited by: 90 articles | PMID: 22877863 | PMCID: PMC3467744
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The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data.
Cerami E, Gao J, Dogrusoz U, Gross BE, Sumer SO, Aksoy BA, Jacobsen A, Byrne CJ, Heuer ML, Larsson E, Antipin Y, Reva B, Goldberg AP, Sander C, Schultz N
Cancer Discov, 2(5):401-404, 01 May 2012
Cited by: 10007 articles | PMID: 22588877 | PMCID: PMC3956037
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The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants.
Cock PJ, Fields CJ, Goto N, Heuer ML, Rice PM
Nucleic Acids Res, 38(6):1767-1771, 16 Dec 2009
Cited by: 740 articles | PMID: 20015970 | PMCID: PMC2847217
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Databases and information integration for the Medicago truncatula genome and transcriptome.
Cannon SB, Crow JA, Heuer ML, Wang X, Cannon EK, Dwan C, Lamblin AF, Vasdewani J, Mudge J, Cook A, Gish J, Cheung F, Kenton S, Kunau TM, Brown D, May GD, Kim D, Cook DR, Roe BA, [...] Retzel EF
Plant Physiol, 138(1):38-46, 01 May 2005
Cited by: 33 articles | PMID: 15888676
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Bowen ratio/energy balance and scaled leaf measurements of co2 flux over burned prosopis savanna
Ansley RJ, Dugas WA, Heuer ML, Kramp BA
Ecol Appl, 12(4):948-961, 01 Aug 2002
Cited by: 2 articles | AGR: IND605875097
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