Europe PMC requires Javascript to function effectively.

Either your web browser doesn't support Javascript or it is currently turned off. In the latter case, please turn on Javascript support in your web browser and reload this page.

Search life-sciences literature (45,103,589 articles, preprints and more)

Search results

1-25 of 56 results

Sort by:

Relevance ^{Relevance: This is determined based on a ranking of criteria including term frequency, rarity of term, recency of article, whether there is a Title or Author field match, etc.}

Times cited

Date

1 2 3

NCI's Proteomic Data Commons: A Cloud-Based Proteomics Repository Empowering Comprehensive Cancer Analysis through Cross-Referencing with Genomic and Imaging Data.
Thangudu RR, Holck M, Singhal D, Pilozzi A, Edwards N, Rudnick PA, Domagalski MJ, Chilappagari P, Ma L, Xin Y, Le T, Nyce K, Chaudhary R, Ketchum KA, Maurais A, Connolly B, Riffle M, Chambers MC, MacLean B, [...] Zhang X
Cancer Res Commun, 4(9):2480-2488, 01 Sep 2024
Cited by: 0 articles | PMID: 39225545 | PMCID: PMC11413857
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Multi-scale signaling and tumor evolution in high-grade gliomas.
Liu J, Cao S, Imbach KJ, Gritsenko MA, Lih TM, Kyle JE, Yaron-Barir TM, Binder ZA, Li Y, Strunilin I, Wang YT, Tsai CF, Ma W, Chen L, Clark NM, Shinkle A, Naser Al Deen N, Caravan W, Houston A, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 42(7):1217-1238.e19, 01 Jul 2024
Cited by: 0 articles | PMID: 38981438
Add to export list
Comprehensive proteogenomic characterization of rare kidney tumors.
Li GX, Chen L, Hsiao Y, Mannan R, Zhang Y, Luo J, Petralia F, Cho H, Hosseini N, Leprevost FDV, Calinawan A, Li Y, Anand S, Dagar A, Geffen Y, Kumar-Sinha C, Chugh S, Le A, Ponce S, [...] Clinical Proteomic Tumor Analysis Consortium
Cell Rep Med, 5(5):101547, 03 May 2024
Cited by: 0 articles | PMID: 38703764 | PMCID: PMC11148773
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Pan-cancer proteogenomics characterization of tumor immunity.
Petralia F, Ma W, Yaron TM, Caruso FP, Tignor N, Wang JM, Charytonowicz D, Johnson JL, Huntsman EM, Marino GB, Calinawan A, Evangelista JE, Selvan ME, Chowdhury S, Rykunov D, Krek A, Song X, Turhan B, Christianson KE, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 187(5):1255-1277.e27, 14 Feb 2024
Cited by: 8 articles | PMID: 38359819
Add to export list
Proteogenomic insights suggest druggable pathways in endometrial carcinoma.
Dou Y, Katsnelson L, Gritsenko MA, Hu Y, Reva B, Hong R, Wang YT, Kolodziejczak I, Lu RJ, Tsai CF, Bu W, Liu W, Guo X, An E, Arend RC, Bavarva J, Chen L, Chu RK, Czekański A, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 41(9):1586-1605.e15, 10 Aug 2023
Cited by: 8 articles | PMID: 37567170 | PMCID: PMC10631452
Add to export list Free full text in Europe PMC
Pan-cancer proteogenomics connects oncogenic drivers to functional states.
Li Y, Porta-Pardo E, Tokheim C, Bailey MH, Yaron TM, Stathias V, Geffen Y, Imbach KJ, Cao S, Anand S, Akiyama Y, Liu W, Wyczalkowski MA, Song Y, Storrs EP, Wendl MC, Zhang W, Sibai M, Ruiz-Serra V, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 186(18):3921-3944.e25, 14 Aug 2023
Cited by: 16 articles | PMID: 37582357
Add to export list
Proteogenomic data and resources for pan-cancer analysis.
Li Y, Dou Y, Da Veiga Leprevost F, Geffen Y, Calinawan AP, Aguet F, Akiyama Y, Anand S, Birger C, Cao S, Chaudhary R, Chilappagari P, Cieslik M, Colaprico A, Zhou DC, Day C, Domagalski MJ, Esai Selvan M, Fenyö D, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 41(8):1397-1406, 01 Aug 2023
Cited by: 25 articles | PMID: 37582339 | PMCID: PMC10506762
Add to export list Review Free full text in Europe PMC
Deep learning integrates histopathology and proteogenomics at a pan-cancer level.
Wang JM, Hong R, Demicco EG, Tan J, Lazcano R, Moreira AL, Li Y, Calinawan A, Razavian N, Schraink T, Gillette MA, Omenn GS, An E, Rodriguez H, Tsirigos A, Ruggles KV, Ding L, Robles AI, Mani DR, [...] Clinical Proteomic Tumor Analysis Consortium
Cell Rep Med, 4(9):101173, 14 Aug 2023
Cited by: 5 articles | PMID: 37582371 | PMCID: PMC10518635
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation.
Geffen Y, Anand S, Akiyama Y, Yaron TM, Song Y, Johnson JL, Govindan A, Babur Ö, Li Y, Huntsman E, Wang LB, Birger C, Heiman DI, Zhang Q, Miller M, Maruvka YE, Haradhvala NJ, Calinawan A, Belkin S, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 186(18):3945-3967.e26, 14 Aug 2023
Cited by: 18 articles | PMID: 37582358 | PMCID: PMC10680287
Add to export list Free full text in Europe PMC
Histopathologic and proteogenomic heterogeneity reveals features of clear cell renal cell carcinoma aggressiveness.
Li Y, Lih TM, Dhanasekaran SM, Mannan R, Chen L, Cieslik M, Wu Y, Lu RJ, Clark DJ, Kołodziejczak I, Hong R, Chen S, Zhao Y, Chugh S, Caravan W, Naser Al Deen N, Hosseini N, Newton CJ, Krug K, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 41(1):139-163.e17, 22 Dec 2022
Cited by: 49 articles | PMID: 36563681 | PMCID: PMC9839644
Add to export list Free full text in Europe PMC
Proteogenomic characterization of pancreatic ductal adenocarcinoma.
Cao L, Huang C, Cui Zhou D, Hu Y, Lih TM, Savage SR, Krug K, Clark DJ, Schnaubelt M, Chen L, da Veiga Leprevost F, Eguez RV, Yang W, Pan J, Wen B, Dou Y, Jiang W, Liao Y, Shi Z, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 184(19):5031-5052.e26, 01 Sep 2021
Cited by: 190 articles | PMID: 34534465 | PMCID: PMC8654574
Add to export list Free full text in Europe PMC
A proteogenomic portrait of lung squamous cell carcinoma.
Satpathy S, Krug K, Jean Beltran PM, Savage SR, Petralia F, Kumar-Sinha C, Dou Y, Reva B, Kane MH, Avanessian SC, Vasaikar SV, Krek A, Lei JT, Jaehnig EJ, Omelchenko T, Geffen Y, Bergstrom EJ, Stathias V, Christianson KE, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 184(16):4348-4371.e40, 01 Aug 2021
Cited by: 130 articles | PMID: 34358469 | PMCID: PMC8475722
Add to export list Free full text in Europe PMC
Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.
Huang C, Chen L, Savage SR, Eguez RV, Dou Y, Li Y, da Veiga Leprevost F, Jaehnig EJ, Lei JT, Wen B, Schnaubelt M, Krug K, Song X, Cieślik M, Chang HY, Wyczalkowski MA, Li K, Colaprico A, Li QK, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 39(3):361-379.e16, 07 Jan 2021
Cited by: 161 articles | PMID: 33417831 | PMCID: PMC7946781
Add to export list Free full text in Europe PMC
Proteogenomic and metabolomic characterization of human glioblastoma.
Wang LB, Karpova A, Gritsenko MA, Kyle JE, Cao S, Li Y, Rykunov D, Colaprico A, Rothstein JH, Hong R, Stathias V, Cornwell M, Petralia F, Wu Y, Reva B, Krug K, Pugliese P, Kawaler E, Olsen LK, [...] Clinical Proteomic Tumor Analysis Consortium
Cancer Cell, 39(4):509-528.e20, 11 Feb 2021
Cited by: 263 articles | PMID: 33577785 | PMCID: PMC8044053
Add to export list Free full text in Europe PMC
Integrated Proteogenomic Characterization across Major Histological Types of Pediatric Brain Cancer.
Petralia F, Tignor N, Reva B, Koptyra M, Chowdhury S, Rykunov D, Krek A, Ma W, Zhu Y, Ji J, Calinawan A, Whiteaker JR, Colaprico A, Stathias V, Omelchenko T, Song X, Raman P, Guo Y, Brown MA, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 183(7):1962-1985.e31, 25 Nov 2020
Cited by: 152 articles | PMID: 33242424 | PMCID: PMC8143193
Add to export list Free full text in Europe PMC
Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy.
Krug K, Jaehnig EJ, Satpathy S, Blumenberg L, Karpova A, Anurag M, Miles G, Mertins P, Geffen Y, Tang LC, Heiman DI, Cao S, Maruvka YE, Lei JT, Huang C, Kothadia RB, Colaprico A, Birger C, Wang J, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 183(5):1436-1456.e31, 18 Nov 2020
Cited by: 222 articles | PMID: 33212010 | PMCID: PMC8077737
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Integrated Proteomic and Glycoproteomic Characterization of Human High-Grade Serous Ovarian Carcinoma.
Hu Y, Pan J, Shah P, Ao M, Thomas SN, Liu Y, Chen L, Schnaubelt M, Clark DJ, Rodriguez H, Boja ES, Hiltke T, Kinsinger CR, Rodland KD, Li QK, Qian J, Zhang Z, Chan DW, Zhang H, Clinical Proteomic Tumor Analysis Consortium
Cell Rep, 33(3):108276, 01 Oct 2020
Cited by: 66 articles | PMID: 33086064 | PMCID: PMC7970828
Add to export list Free full text in Europe PMC
Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma.
Gillette MA, Satpathy S, Cao S, Dhanasekaran SM, Vasaikar SV, Krug K, Petralia F, Li Y, Liang WW, Reva B, Krek A, Ji J, Song X, Liu W, Hong R, Yao L, Blumenberg L, Savage SR, Wendl MC, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 182(1):200-225.e35, 01 Jul 2020
Cited by: 333 articles | PMID: 32649874 | PMCID: PMC7373300
Add to export list Free full text in Europe PMC
Li-Fraumeni Exploration Consortium Data Coordinating Center: Building an Interactive Web-Based Resource for Collaborative International Cancer Epidemiology Research for a Rare Condition.
Mai PL, Sand SR, Saha N, Oberti M, Dolafi T, DiGianni L, Root EJ, Kong X, Bremer RC, Santiago KM, Bojadzieva J, Barley D, Novokmet A, Ketchum KA, Nguyen N, Jacob S, Nichols KE, Kratz CP, Schiffman JD, [...] Weitzel JN
Cancer Epidemiol Biomarkers Prev, 29(5):927-935, 10 Mar 2020
Cited by: 5 articles | PMID: 32156722 | PMCID: PMC7196512
Add to export list Free full text in Europe PMC
Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.
Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, Li Y, Rykunov D, Li QK, Chen LS, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 180(1):207, 01 Jan 2020
Cited by: 41 articles | PMID: 31923397
Add to export list
Proteogenomic Characterization of Endometrial Carcinoma.
Dou Y, Kawaler EA, Cui Zhou D, Gritsenko MA, Huang C, Blumenberg L, Karpova A, Petyuk VA, Savage SR, Satpathy S, Liu W, Wu Y, Tsai CF, Wen B, Li Z, Cao S, Moon J, Shi Z, Cornwell M, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 180(4):729-748.e26, 13 Feb 2020
Cited by: 218 articles | PMID: 32059776 | PMCID: PMC7233456
Add to export list Free full text in Europe PMC
Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma.
Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, Li Y, Rykunov D, Li QK, Chen LS, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 179(4):964-983.e31, 01 Oct 2019
Cited by: 334 articles | PMID: 31675502 | PMCID: PMC7331093
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities.
Vasaikar S, Huang C, Wang X, Petyuk VA, Savage SR, Wen B, Dou Y, Zhang Y, Shi Z, Arshad OA, Gritsenko MA, Zimmerman LJ, McDermott JE, Clauss TR, Moore RJ, Zhao R, Monroe ME, Wang YT, Chambers MC, [...] Clinical Proteomic Tumor Analysis Consortium
Cell, 177(4):1035-1049.e19, 25 Apr 2019
Cited by: 346 articles | PMID: 31031003 | PMCID: PMC6768830
Add to export list Free full text in Europe PMC
Proteogenomics connects somatic mutations to signalling in breast cancer.
Mertins P, Mani DR, Ruggles KV, Gillette MA, Clauser KR, Wang P, Wang X, Qiao JW, Cao S, Petralia F, Kawaler E, Mundt F, Krug K, Tu Z, Lei JT, Gatza ML, Wilkerson M, Perou CM, Yellapantula V, [...] NCI CPTAC
Nature, 534(7605):55-62, 25 May 2016
Cited by: 906 articles | PMID: 27251275 | PMCID: PMC5102256
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
A Description of the Clinical Proteomic Tumor Analysis Consortium (CPTAC) Common Data Analysis Pipeline.
Rudnick PA, Markey SP, Roth J, Mirokhin Y, Yan X, Tchekhovskoi DV, Edwards NJ, Thangudu RR, Ketchum KA, Kinsinger CR, Mesri M, Rodriguez H, Stein SE
J Proteome Res, 15(3):1023-1032, 25 Feb 2016
Cited by: 73 articles | PMID: 26860878 | PMCID: PMC5117628
Add to export list Free full text in Europe PMC

1-25 of 56 results

1 2 3

Search life-sciences literature (45,103,589 articles, preprints and more)

Search results

Partnerships & funding