Europe PMC requires Javascript to function effectively.

Either your web browser doesn't support Javascript or it is currently turned off. In the latter case, please turn on Javascript support in your web browser and reload this page.

Search life-sciences literature (45,104,145 articles, preprints and more)

Search results

1-25 of 56 results

Sort by:

Relevance ^{Relevance: This is determined based on a ranking of criteria including term frequency, rarity of term, recency of article, whether there is a Title or Author field match, etc.}

Times cited

Date

1 2 3

KLF13 promotes SLE pathogenesis by modifying chromatin accessibility of key proinflammatory cytokine genes.
Wang A, Fairhurst AM, Liu K, Wakeland B, Barnes S, Malladi VS, Viswanathan K, Arana C, Dozmorov I, Singhar A, Du Y, Imam M, Moses A, Chen C, Sunkavalli A, Casco J, Rakheja D, Li QZ, Mohan C, [...] Khan S
Commun Biol, 7(1):1446, 06 Nov 2024
Cited by: 0 articles | PMID: 39506084 | PMCID: PMC11541912
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Optimizing genomics pipeline execution with integer linear programming
Melnichenko O, Malladi VS
bioRxiv, 08 Feb 2024
Cited by: 0 articles | PPR: PPR804454
Add to export list Preprint
Tumor loss-of-function mutations in STK11/LKB1 induce cachexia.
Iyengar P, Gandhi AY, Granados J, Guo T, Gupta A, Yu J, Llano EM, Zhang F, Gao A, Kandathil A, Williams D, Gao B, Girard L, Malladi VS, Shelton JM, Evers BM, Hannan R, Ahn C, Minna JD, Infante RE
JCI Insight, 8(8):e165419, 24 Apr 2023
Cited by: 3 articles | PMID: 37092555 | PMCID: PMC10243820
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
The ENCODE Uniform Analysis Pipelines
Hitz BC, Lee J, Jolanki O, Kagda MS, Graham K, Sud P, Gabdank I, Seth Strattan J, Sloan CA, Dreszer T, Rowe LD, Podduturi NR, Malladi VS, Chan ET, Davidson JM, Ho M, Miyasato S, Simison M, Tanaka F, [...] Cherry JM
bioRxiv, 06 Apr 2023
Cited by: 0 articles | PPR: PPR641566
Add to export list Preprint
Novel long non-coding RNAs associated with inflammation and macrophage activation in human.
Chini A, Guha P, Malladi VS, Guo Z, Mandal SS
Sci Rep, 13(1):4036, 10 Mar 2023
Cited by: 5 articles | PMID: 36899011 | PMCID: PMC10006430
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Targeting ESR1 mutation-induced transcriptional addiction in breast cancer with BET inhibition.
Udden SN, Wang Q, Kumar S, Malladi VS, Wu SY, Wei S, Posner BA, Geboers S, Williams NS, Liu Y, Sharma JK, Mani RS, Malladi S, Parra K, Hofstad M, Raj GV, Larios JM, Jagsi R, Wicha MS, [...] Alluri PG
JCI Insight, 7(17):e151851, 08 Sep 2022
Cited by: 4 articles | PMID: 35881485 | PMCID: PMC9536271
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Epigenetic Repression of STING by MYC Promotes Immune Evasion and Resistance to Immune Checkpoint Inhibitors in Triple-Negative Breast Cancer.
Lee KM, Lin CC, Servetto A, Bae J, Kandagatla V, Ye D, Kim G, Sudhan DR, Mendiratta S, González Ericsson PI, Balko JM, Lee J, Barnes S, Malladi VS, Tabrizi S, Reddy SM, Yum S, Chang CW, Hutchinson KE, [...] Arteaga CL
Cancer Immunol Res, 10(7):829-843, 01 Jul 2022
Cited by: 15 articles | PMID: 35561311 | PMCID: PMC9250627
Add to export list Free full text in Europe PMC
Decoding Human Genome Regulatory Features That Influence HIV-1 Proviral Expression and Fate Through an Integrated Genomics Approach.
Ruess H, Lee J, Guzman C, Malladi VS, D'Orso I
Bioinform Biol Insights, 16:11779322211072333, 26 Feb 2022
Cited by: 1 article | PMID: 35250265 | PMCID: PMC8891870
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Glucose starvation induces a switch in the histone acetylome for activation of gluconeogenic and fat metabolism genes.
Hsieh WC, Sutter BM, Ruess H, Barnes SD, Malladi VS, Tu BP
Mol Cell, 82(1):60-74.e5, 01 Jan 2022
Cited by: 37 articles | PMID: 34995509 | PMCID: PMC8794035
Add to export list Free full text in Europe PMC
Improving Renal Tumor Biopsy Prognostication With BAP1 Analyses.
Kapur P, Setoodeh S, Araj E, Yan J, Malladi VS, Cadeddu JA, Christie A, Brugarolas J
Arch Pathol Lab Med, 146(2):154-165, 01 Jan 2022
Cited by: 4 articles | PMID: 34019633 | PMCID: PMC9812366
Add to export list Free full text in Europe PMC
A multi-omic single-cell landscape of human gynecologic malignancies.
Regner MJ, Wisniewska K, Garcia-Recio S, Thennavan A, Mendez-Giraldez R, Malladi VS, Hawkins G, Parker JS, Perou CM, Bae-Jump VL, Franco HL
Mol Cell, 81(23):4924-4941.e10, 04 Nov 2021
Cited by: 36 articles | PMID: 34739872 | PMCID: PMC8642316
Add to export list Free full text in Europe PMC
Germline and sporadic mTOR pathway mutations in low-grade oncocytic tumor of the kidney.
Kapur P, Gao M, Zhong H, Chintalapati S, Mitui M, Barnes SD, Zhou Q, Miyata J, Carrillo D, Malladi VS, Rakheja D, Pedrosa I, Xu L, Kinch L, Brugarolas J
Mod Pathol, 35(3):333-343, 20 Sep 2021
Cited by: 17 articles | PMID: 34538873 | PMCID: PMC9817016
Add to export list Free full text in Europe PMC
Single-cell analysis of mouse and human prostate reveals novel fibroblasts with specialized distribution and microenvironment interactions.
Joseph DB, Henry GH, Malewska A, Reese JC, Mauck RJ, Gahan JC, Hutchinson RC, Malladi VS, Roehrborn CG, Vezina CM, Strand DW
J Pathol, 255(2):141-154, 22 Jul 2021
Cited by: 41 articles | PMID: 34173975 | PMCID: PMC8429220
Add to export list Free full text in Europe PMC
SeqWho: Reliable, rapid determination of sequence file identity usingk-mer frequencies
Bennett C, Thornton M, Park C, Henry G, Zhang Y, Malladi VS, Kim D
bioRxiv, 11 Mar 2021
Cited by: 0 articles | PPR: PPR296719
Add to export list Preprint
Cancer drug discovery as a low rank tensor completion problem
Murali VS, Ağaç Çobanoğlu D, Hsieh M, Zinn M, Malladi VS, Gesell J, Williams NS, Welf ES, Raj GV, Çobanoğlu MC
bioRxiv, 09 Mar 2021
Cited by: 0 articles | PPR: PPR294217
Add to export list Preprint
Perivascular mesenchymal cells control adipose-tissue macrophage accrual in obesity.
Shan B, Shao M, Zhang Q, Hepler C, Paschoal VA, Barnes SD, Vishvanath L, An YA, Jia L, Malladi VS, Strand DW, Gupta OT, Elmquist JK, Oh D, Gupta RK
Nat Metab, 2(11):1332-1349, 02 Nov 2020
Cited by: 38 articles | PMID: 33139957 | PMCID: PMC7669663
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Methods developed during the first National Center for Biotechnology Information Structural Variation Codeathon at Baylor College of Medicine
Mahmoud M, Gener AR, Khayat MM, English AC, Balaji A, Zhou A, Hehn A, Fungtammasan A, Chrisman BS, Chin C, Lin C, Lo C, Liao C, Carvalho CMB, Diesh C, Symer DE, Kalra D, Albin D, Aliyev E, [...] Busby B
F1000Res, 16 Sep 2020
Cited by: 0 articles | PPR: PPR214672
Add to export list Preprint v1
Urethral luminal epithelia are castration-insensitive cells of the proximal prostate.
Joseph DB, Henry GH, Malewska A, Iqbal NS, Ruetten HM, Turco AE, Abler LL, Sandhu SK, Cadena MT, Malladi VS, Reese JC, Mauck RJ, Gahan JC, Hutchinson RC, Roehrborn CG, Baker LA, Vezina CM, Strand DW
Prostate, 80(11):872-884, 04 Jun 2020
Cited by: 46 articles | PMID: 32497356 | PMCID: PMC7339731
Add to export list Free full text in Europe PMC
Total Functional Score of Enhancer Elements Identifies Lineage-Specific Enhancers That Drive Differentiation of Pancreatic Cells.
Malladi VS, Nagari A, Franco HL, Kraus WL
Bioinform Biol Insights, 14:1177932220938063, 01 Jul 2020
Cited by: 3 articles | PMID: 32655276 | PMCID: PMC7331761
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.
Zhang Z, Zhou C, Li X, Barnes SD, Deng S, Hoover E, Chen CC, Lee YS, Zhang Y, Wang C, Metang LA, Wu C, Tirado CR, Johnson NA, Wongvipat J, Navrazhina K, Cao Z, Choi D, Huang CH, [...] Mu P
Cancer Cell, 37(4):584-598.e11, 26 Mar 2020
Cited by: 79 articles | PMID: 32220301 | PMCID: PMC7292228
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Urethral luminal epithelia are castration-insensitive progenitors of the proximal prostate
Joseph DB, Henry GH, Malewska A, Iqbal NS, Ruetten HM, Turco AE, Abler LL, Sandhu SK, Cadena MT, Malladi VS, Reese JC, Mauck RJ, Gahan JC, Hutchinson RC, Roehrborn CG, Baker LA, Vezina CM, Strand DW
bioRxiv, 19 Feb 2020
Cited by: 0 articles | PPR: PPR113860
Add to export list Preprint
Open collaborative writing with Manubot.
Himmelstein DS, Rubinetti V, Slochower DR, Hu D, Malladi VS, Greene CS, Gitter A
PLoS Comput Biol, 15(6):e1007128, 24 Jun 2019
Cited by: 32 articles | PMID: 31233491 | PMCID: PMC6611653
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC
Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21.
Kim DS, Camacho CV, Nagari A, Malladi VS, Challa S, Kraus WL
Mol Cell, 75(6):1270-1285.e14, 24 Jul 2019
Cited by: 127 articles | PMID: 31351877 | PMCID: PMC6754283
Add to export list Free full text in Europe PMC
Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers.
Hashimoto H, Wang Z, Garry GA, Malladi VS, Botten GA, Ye W, Zhou H, Osterwalder M, Dickel DE, Visel A, Liu N, Bassel-Duby R, Olson EN
Cell Stem Cell, 25(1):69-86.e5, 09 May 2019
Cited by: 56 articles | PMID: 31080136 | PMCID: PMC6754266
Add to export list Free full text in Europe PMC
Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation.
Stefanius K, Servage K, de Souza Santos M, Gray HF, Toombs JE, Chimalapati S, Kim MS, Malladi VS, Brekken R, Orth K
Elife, 8:e40226, 28 May 2019
Cited by: 54 articles | PMID: 31134894 | PMCID: PMC6538373
Add to export list
This article is in the Europe PMC Open access subset. Refer to the copyright information in the article for licensing details.
Free full text in Europe PMC

1-25 of 56 results

1 2 3

Search life-sciences literature (45,104,145 articles, preprints and more)

Search results

Partnerships & funding