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Suggested authors matching "AUTH:Sarantopoulou D" with an ORCID

Dimitra Sarantopoulou
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Retraction Note: Aging exacerbates the brain inflammatory micro-environment contributing to α-synuclein pathology and functional deficits in a mouse model of DLB/PD.
Iba M, McDevitt RA, Kim C, Roy R, Sarantopoulou D, Tommer E, Siegars B, Sallin M, Kwon S, Sen JM, Sen R, Masliah E
Mol Neurodegener, 19(1):74, 16 Oct 2024
Cited by: 0 articles | PMID: 39415232 | PMCID: PMC11484304
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Three-dimensional chromatin reorganization regulates B cell development during ageing.
Ma F, Cao Y, Du H, Braikia FZ, Zong L, Ollikainen N, Bayer M, Qiu X, Park B, Roy R, Nandi S, Sarantopoulou D, Ziman A, Bianchi AH, Beerman I, Zhao K, Grosschedl R, Sen R
Nat Cell Biol, 26(6):991-1002, 12 Jun 2024
Cited by: 0 articles | PMID: 38866970 | PMCID: PMC11178499
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Degree of Cyclooxygenase-2 Inhibition Modulates Blood Pressure Response to Celecoxib and Naproxen
Theken KN, Ghosh S, Skarke C, Fries S, Lahens NF, Sarantopoulou D, Grant GR, FitzGerald GA, Grosser T
medRxiv, 31 May 2024
Cited by: 0 articles | PPR: PPR860580
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BEERS2: RNA-Seq simulation through high fidelity in silico modeling.
Brooks TG, Lahens NF, Mrčela A, Sarantopoulou D, Nayak S, Naik A, Sengupta S, Choi PS, Grant GR
Brief Bioinform, 25(3):bbae164, 01 Mar 2024
Cited by: 0 articles | PMID: 38605641 | PMCID: PMC11009461
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Epigenetic signature of human immune aging in the GESTALT study.
Roy R, Kuo PL, Candia J, Sarantopoulou D, Ubaida-Mohien C, Hernandez D, Kaileh M, Arepalli S, Singh A, Bektas A, Kim J, Moore AZ, Tanaka T, McKelvey J, Zukley L, Nguyen C, Wallace T, Dunn C, Wood W, [...] Ferrucci L
Elife, 12:e86136, 17 Aug 2023
Cited by: 5 articles | PMID: 37589453 | PMCID: PMC10506794
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BEERS2: RNA-Seq simulation through high fidelityin silicomodeling
Brooks TG, Lahens NF, Mrčela A, Sarantopoulou D, Nayak S, Naik A, Sengupta S, Choi PS, Grant GR
bioRxiv, 24 Apr 2023
Cited by: 0 articles | PPR: PPR649442
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Sexual dimorphism in the response to chronic circadian misalignment on a high-fat diet.
Anderson ST, Meng H, Brooks TG, Tang SY, Lordan R, Sengupta A, Nayak S, Mřela A, Sarantopoulou D, Lahens NF, Weljie A, Grant GR, Bushman FD, FitzGerald GA
Sci Transl Med, 15(696):eabo2022, 17 May 2023
Cited by: 13 articles | PMID: 37196066
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Epigenetic signature of human immune aging: the GESTALT study
Roy R, Kuo P, Candia J, Sarantopoulou D, Ubaida-Mohien C, Hernandez D, Kaileh M, Arepalli S, Singh A, Bektas A, Kim J, Moore AZ, Tanaka T, McKelvey J, Zukley L, Nguyen C, Wallace T, Dunn C, Wood W, [...] Ferrucci L
bioRxiv, 23 Jan 2023
Cited by: 0 articles | PPR: PPR601343
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Aging exacerbates the brain inflammatory micro-environment contributing to α-synuclein pathology and functional deficits in a mouse model of DLB/PD.
Iba M, McDevitt RA, Kim C, Roy R, Sarantopoulou D, Tommer E, Siegars B, Sallin M, Kwon S, Sen JM, Sen R, Masliah E
Mol Neurodegener, 17(1):60, 05 Sep 2022
Cited by: 16 articles | PMID: 36064424 | PMCID: PMC9447339
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DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.
Roy R, Ramamoorthy S, Shapiro BD, Kaileh M, Hernandez D, Sarantopoulou D, Arepalli S, Boller SR, Singh A, Bektas A, Kim J, Moore AZ, Tanaka T, McKelvey J, Zukley L, Nguyen C, Wallace T, Dunn C, Wersto R, [...] Sen R
Immunity, 55(6):1135, 01 Jun 2022
Cited by: 3 articles | PMID: 35704994
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CAMPAREE: a robust and configurable RNA expression simulator.
Lahens NF, Brooks TG, Sarantopoulou D, Nayak S, Lawrence C, Mrčela A, Srinivasan A, Schug J, Hogenesch JB, Barash Y, Grant GR
BMC Genomics, 22(1):692, 25 Sep 2021
Cited by: 4 articles | PMID: 34563123 | PMCID: PMC8467241
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DNA methylation signatures reveal that distinct combinations of transcription factors specify human immune cell epigenetic identity.
Roy R, Ramamoorthy S, Shapiro BD, Kaileh M, Hernandez D, Sarantopoulou D, Arepalli S, Boller S, Singh A, Bektas A, Kim J, Moore AZ, Tanaka T, McKelvey J, Zukley L, Nguyen C, Wallace T, Dunn C, Wersto R, [...] Sen R
Immunity, 54(11):2465-2480.e5, 26 Oct 2021
Cited by: 25 articles | PMID: 34706222 | PMCID: PMC9190145
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Hidden neural networks for transmembrane protein topology prediction.
Tamposis IA, Sarantopoulou D, Theodoropoulou MC, Stasi EA, Kontou PI, Tsirigos KD, Bagos PG
Comput Struct Biotechnol J, 19:6090-6097, 08 Nov 2021
Cited by: 5 articles | PMID: 34849210 | PMCID: PMC8606341
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Comparative evaluation of full-length isoform quantification from RNA-Seq.
Sarantopoulou D, Brooks TG, Nayak S, Mrčela A, Lahens NF, Grant GR
BMC Bioinformatics, 22(1):266, 25 May 2021
Cited by: 13 articles | PMID: 34034652 | PMCID: PMC8145802
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Sex-dependent compensatory mechanisms preserve blood pressure homeostasis in prostacyclin receptor-deficient mice.
Tang SY, Meng H, Anderson ST, Sarantopoulou D, Ghosh S, Lahens NF, Theken KN, Ricciotti E, Hennessy EJ, Tu V, Bittinger K, Weiljie AM, Grant GR, FitzGerald GA
J Clin Invest, 131(14):136310, 01 Jul 2021
Cited by: 1 article | PMID: 34101620 | PMCID: PMC8279587
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Aging exacerbates the brain inflammatory micro-environment contributing to α-synuclein pathology and functional deficits a mouse model of DLB/PD
Iba M, McDevitt R, Kim C, Roy R, Sarantopoulou D, Tommer E, Kwon S, Siegars B, Sallin M, Sen J, Sen R, Masliah E
Research Square, 19 Feb 2021
Cited by: 0 articles | PPR: PPR286257
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RNA-seq analysis of galaninergic neurons from ventrolateral preoptic nucleus identifies expression changes between sleep and wake
Guo X, Gao X, Keenan BT, Zhu J, Sarantopoulou D, Lian J, Galante RJ, Grant GR, Pack AI
Research Square, 03 Sep 2020
Cited by: 0 articles | PPR: PPR209263
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RNA-seq analysis of galaninergic neurons from ventrolateral preoptic nucleus identifies expression changes between sleep and wake.
Guo X, Gao X, Keenan BT, Zhu J, Sarantopoulou D, Lian J, Galante RJ, Grant GR, Pack AI
BMC Genomics, 21(1):633, 14 Sep 2020
Cited by: 3 articles | PMID: 32928100 | PMCID: PMC7491139
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Sex dependent compensatory mechanisms to preserve blood pressure homeostasis in PGI₂receptor deficient mice
Tang SY, Anderson ST, Meng H, Sarantopoulou D, Ricciotti E, Hennessy EJ, Grant GR, FitzGerald GA
bioRxiv, 28 Jan 2020
Cited by: 0 articles | PPR: PPR110431
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JUCHMME: a Java Utility for Class Hidden Markov Models and Extensions for biological sequence analysis.
Tamposis IA, Tsirigos KD, Theodoropoulou MC, Kontou PI, Tsaousis GN, Sarantopoulou D, Litou ZI, Bagos PG
Bioinformatics, 35(24):5309-5312, 01 Dec 2019
Cited by: 3 articles | PMID: 31250907
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Age attenuates the transcriptional changes that occur with sleep in the medial prefrontal cortex.
Guo X, Keenan BT, Sarantopoulou D, Lim DC, Lian J, Grant GR, Pack AI
Aging Cell, 18(6):e13021, 24 Sep 2019
Cited by: 16 articles | PMID: 31549781 | PMCID: PMC6826131
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Comparative evaluation of full-length isoform quantification from RNA-Seq
Sarantopoulou D, Brooks TG, Nayak S, Mrcela A, Lahens NF, Grant GR
bioRxiv, 11 Jul 2019
Cited by: 0 articles | PPR: PPR85443
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Comparative evaluation of RNA-Seq library preparation methods for strand-specificity and low input.
Sarantopoulou D, Tang SY, Ricciotti E, Lahens NF, Lekkas D, Schug J, Guo XS, Paschos GK, FitzGerald GA, Pack AI, Grant GR
Sci Rep, 9(1):13477, 17 Sep 2019
Cited by: 15 articles | PMID: 31530843 | PMCID: PMC6748930
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Distinct vascular genomic response of proton and gamma radiation
Emanuela R, Sarantopoulou D, Grant GR, Sanzari JK, Krigsfeld GS, Kiliti AJ, Kennedy AR, Grosser T
bioRxiv, 02 Nov 2018
Cited by: 0 articles | PPR: PPR60799
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Distinct vascular genomic response of proton and gamma radiation-A pilot investigation.
Ricciotti E, Sarantopoulou D, Grant GR, Sanzari JK, Krigsfeld GS, Kiliti AJ, Kennedy AR, Grosser T
PLoS One, 14(2):e0207503, 11 Feb 2019
Cited by: 5 articles | PMID: 30742630 | PMCID: PMC6370185
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