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Writing Cython bindings to every single bioinformatics tool out there
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Writing Cython bindings to every single bioinformatics tool out there
445 followers · 334 following

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@ISA-tools @owlcollab @PyFilesystem @OBOFoundry @meetU-MasterStudents @PyO3 @sphinx-contrib @vita-rust @zellerlab @AMI2B2018-BigData @fastobo @BioArchLinux

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Starred repositories

3 stars written in Cython
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pysam-developers / pysam

Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…

Cython 785 273 Updated Oct 30, 2024

schneebergerlab / syri

Synteny and Rearrangement Identifier

Cython 343 37 Updated Oct 28, 2024

althonos / pyhmmer

Cython bindings and Python interface to HMMER3.

Cython 128 12 Updated Nov 5, 2024

Starred topics