Oct 11, 2005 · The proposed hidden Markov model emulates the generation process of mass spectra in a fully probabilistic way, which supports a clean separation ...
Inference with the graphical model for de novo peptide sequencing estimates posterior probabilities for amino acids rather than scores for single symbols in the ...
In this paper we present a novel method for de novo peptide sequencing based on a hidden Markov model.
The goal of de novo peptide sequencing is to reconstruct an amino acid sequence from a given mass spectrum. De novo sequencing by means of mass spectrometry is ...
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NovoHMM used Hidden Markov Model to simulate the generation process in a total probability, which supported the separation of signal and noise in MS data.
a hidden Markov model for improved peptide identification | Bioinformatics
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Fischer et al. used HMMs for de novo peptide sequence interpretation (Fischer et al., 2005), modeling the peak intensities as the emission probabilities. They ...
Jul 24, 2021 · NovoHMM is a software for hidden Markov model for de novo peptide sequencing. Advertisement. Ad.
Jul 18, 2017 · In this study, we propose a deep neural network model, DeepNovo, for de novo peptide sequencing. DeepNovo architecture combines recent advances ...
Dec 6, 2023 · A hidden Markov model for de novo peptide sequencing. Advances in Neural Information Processing Systems 2005, 17, 457–464. (40) Ma, B. Novor ...
The present systems and methods introduce deep learning to de novo peptide sequencing from tandem mass spectrometry data. The systems and methods achieve ...