Nov 16, 2009 · Abstract. Background: Graph-based pathway ontologies and databases are widely used to represent data about cellular processes. This ...

Nov 16, 2009 · Here, we present a framework for querying a compound graph-based pathway database, as well as a number of graph-based queries and algorithms ...

A querying framework, along with a number of graph-theoretic algorithms from simple neighborhood queries to shortest paths to feedback loops, ...

Towards this goal, we have developed a querying framework along with a number of graph-theoretic algorithms from simple neighborhood queries to shortest paths ...

Towards this goal, we developed a querying framework, along with a number of graph-theoretic algorithms from simple neighborhood queries to shortest paths to ...

Background: Graph-based pathway ontologies and databases are widely used to represent data about cellular processes. This representation makes it possible ...

Algorithms for Effective Querying of Compound Graph-Based Pathway Databases by Ugur Dogrusoz, Ahmet Cetintas, Emek Demir, Ozgun Babur published in.

Algorithms for effective querying of compound graph-based pathway databases. Type of publication: Article. Citation: Publication status: Accepted. Journal: BMC ...

This repository includes several graph algorithms such as k-Neighborhood, Common Stream, Paths Between and Paths From To which can be used for querying ...

Aug 5, 2024 · Algorithms for effective querying of compound graph-based pathway databases. ... A Compound Graph Layout Algorithm for Biological Pathways.