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Ucn3 urocortin 3 [ Mus musculus (house mouse) ]

Gene ID: 83428, updated on 5-Nov-2024

Summary

Official Symbol
Ucn3provided by MGI
Official Full Name
urocortin 3provided by MGI
Primary source
MGI:MGI:1932970
See related
Ensembl:ENSMUSG00000044988 AllianceGenome:MGI:1932970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ucn III
Summary
This gene encodes a member of the corticotropin-releasing hormone peptide family that participates in coordinating autonomic, endocrine, and behavioral responses to stress. The encoded preproprotein undergoes proteolytic processing to generate a mature, functional hormone. The pancreatic islets isolated from mice lacking the encoded protein secrete less insulin in response to high glucose concentrations. Transgenic mice overexpressing the encoded protein exhibit a metabolically favorable phenotype resisting obesity and hyperglycemia on a high-fat diet. [provided by RefSeq, Sep 2016]
Expression
Biased expression in duodenum adult (RPKM 1.4), small intestine adult (RPKM 0.5) and 2 other tissues See more
Orthologs
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Genomic context

See Ucn3 in Genome Data Viewer
Location:
13 A1; 13 2.2 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (3990688..3995349, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (3940688..3945349, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9391 Neighboring gene neuroepithelial cell transforming gene 1 Neighboring gene STARR-positive B cell enhancer ABC_E7198 Neighboring gene tubulin, alpha-like 3 Neighboring gene aldo-keto reductase family 1, member C13 pseudogene Neighboring gene STARR-seq mESC enhancer starr_33495 Neighboring gene aldo-keto reductase family 1, member C14 Neighboring gene STARR-seq mESC enhancer starr_33496 Neighboring gene STARR-seq mESC enhancer starr_33497

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 
  • Targeted (4)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables corticotropin-releasing hormone receptor 2 binding IEA
Inferred from Electronic Annotation
more info
 
enables corticotropin-releasing hormone receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables corticotropin-releasing hormone receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity TAS
Traceable Author Statement
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within adenylate cyclase-activating G protein-coupled receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in adenylate cyclase-activating G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to nutrient levels IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in cellular response to nutrient levels IEA
Inferred from Electronic Annotation
more info
 
involved_in digestion IEA
Inferred from Electronic Annotation
more info
 
involved_in hormone-mediated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in hormone-mediated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within neuropeptide signaling pathway TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of insulin secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of membrane potential ISO
Inferred from Sequence Orthology
more info
 
involved_in response to corticosterone IEA
Inferred from Electronic Annotation
more info
 
involved_in response to glucose IEA
Inferred from Electronic Annotation
more info
 
involved_in response to immobilization stress IEA
Inferred from Electronic Annotation
more info
 
involved_in response to starvation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in axon ISO
Inferred from Sequence Orthology
more info
 
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 
located_in axon terminus ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 
located_in varicosity IEA
Inferred from Electronic Annotation
more info
 
located_in varicosity ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
urocortin-3
Names
Urocortin III

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_031250.5NP_112540.2  urocortin-3 preproprotein

    See identical proteins and their annotated locations for NP_112540.2

    Status: REVIEWED

    Source sequence(s)
    AC139323, AK148451
    Consensus CDS
    CCDS26217.1
    UniProtKB/Swiss-Prot
    Q924A4
    UniProtKB/TrEMBL
    Q0VDY5, Q3UFJ9
    Related
    ENSMUSP00000049678.8, ENSMUST00000058610.8
    Conserved Domains (1) summary
    pfam00473
    Location:123160
    CRF; Corticotropin-releasing factor family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    3990688..3995349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)