Acid-base transporters and pH dynamics in human breast carcinomas predict proliferative activity, metastasis, and survival

Elife. 2021 Jul 5:10:e68447. doi: 10.7554/eLife.68447.

Abstract

Breast cancer heterogeneity in histology and molecular subtype influences metabolic and proliferative activity and hence the acid load on cancer cells. We hypothesized that acid-base transporters and intracellular pH (pHi) dynamics contribute inter-individual variability in breast cancer aggressiveness and prognosis. We show that Na+,HCO3- cotransport and Na+/H+ exchange dominate cellular net acid extrusion in human breast carcinomas. Na+/H+ exchange elevates pHi preferentially in estrogen receptor-negative breast carcinomas, whereas Na+,HCO3- cotransport raises pHi more in invasive lobular than ductal breast carcinomas and in higher malignancy grade breast cancer. HER2-positive breast carcinomas have elevated protein expression of Na+/H+ exchanger NHE1/SLC9A1 and Na+,HCO3- cotransporter NBCn1/SLC4A7. Increased dependency on Na+,HCO3- cotransport associates with severe breast cancer: enlarged CO2/HCO3--dependent rises in pHi predict accelerated cell proliferation, whereas enhanced CO2/HCO3--dependent net acid extrusion, elevated NBCn1 protein expression, and reduced NHE1 protein expression predict lymph node metastasis. Accordingly, we observe reduced survival for patients suffering from luminal A or basal-like/triple-negative breast cancer with high SLC4A7 and/or low SLC9A1 mRNA expression. We conclude that the molecular mechanisms of acid-base regulation depend on clinicopathological characteristics of breast cancer patients. NBCn1 expression and dependency on Na+,HCO3- cotransport for pHi regulation, measured in biopsies of human primary breast carcinomas, independently predict proliferative activity, lymph node metastasis, and patient survival.

Keywords: acid-base; cancer biology; human; luminal A breast cancer; metastasis; microenvironment; proliferation; triple-negative breast cancer.

Publication types

  • Meta-Analysis
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acid-Base Equilibrium / physiology*
  • Aged
  • Animals
  • Bicarbonates / metabolism
  • Breast Neoplasms / genetics
  • Breast Neoplasms / metabolism*
  • Breast Neoplasms / pathology
  • Carcinoma / metabolism*
  • Female
  • Gene Expression Regulation, Neoplastic
  • Humans
  • Hydrogen-Ion Concentration
  • Mice
  • Middle Aged
  • Organoids / metabolism
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Receptors, Estrogen / genetics
  • Receptors, Estrogen / metabolism
  • Sodium-Bicarbonate Symporters / genetics
  • Sodium-Bicarbonate Symporters / metabolism
  • Sodium-Hydrogen Exchanger 1 / genetics
  • Sodium-Hydrogen Exchanger 1 / metabolism
  • Sodium-Hydrogen Exchangers
  • Transcriptome

Substances

  • Bicarbonates
  • RNA, Messenger
  • Receptors, Estrogen
  • SLC4A4 protein, human
  • SLC4A7 protein, human
  • SLC9A1 protein, human
  • Sodium-Bicarbonate Symporters
  • Sodium-Hydrogen Exchanger 1
  • Sodium-Hydrogen Exchangers

Associated data

  • GEO/GSE1992
  • GEO/GSE2034
  • GEO/GSE11121
  • GEO/GSE3143

Grants and funding

The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.