Setd4 (SET domain containing 4) - Rat Genome Database

Name: Setd4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Advanced Search (OLGA)

Gene: Setd4 (SET domain containing 4) Rattus norvegicus

Analyze

Symbol:

Setd4

Name:

SET domain containing 4

RGD ID:

619899

Description:

Predicted to enable protein-lysine N-methyltransferase activity and transcription coactivator activity. Predicted to be involved in several processes, including positive regulation of inflammatory response; positive regulation of macromolecule biosynthetic process; and regulation of cell proliferation in bone marrow. Predicted to be located in cytosol and nucleus. Orthologous to human SETD4 (SET domain containing 4); INTERACTS WITH (+)-schisandrin B; ammonium chloride; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein RDA279; LOC102556275; Rda279; SET domain-containing protein 4; uncharacterized LOC102556275

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SETD4 (SET domain containing 4)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Setd4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Setd4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SETD4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SETD4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Setd4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SETD4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SETD4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Setd4 (SET domain containing 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Setd4 (SET domain containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	SETD4 (SET domain containing 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	setd4 (SET domain containing 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG33230	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	RKM2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	set-29	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	setd4	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	46,315,340 - 46,344,024 (-)	NCBI		GRCr8
mRatBN7.2	11	32,829,509 - 32,859,162 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	32,838,063 - 32,858,243 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	41,532,237 - 41,552,430 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	34,203,780 - 34,223,971 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	33,364,634 - 33,384,761 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	33,781,869 - 33,803,121 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	33,781,870 - 33,801,999 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	37,373,163 - 37,395,496 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	33,765,399 - 33,785,529 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	33,821,642 - 33,829,414 (-)	NCBI
Celera	11	32,480,548 - 32,500,678 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

amyotrophic lateral sclerosis type 1 (ISO)

autosomal dominant intellectual developmental disorder 7 (ISO)

Familial Platelet Disorder with Associated Myeloid Malignancy (ISO)

holocarboxylase synthetase deficiency (ISO)

immunodeficiency 28 (ISO)

thrombocytopenia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (EXP)

(1->4)-beta-D-glucan (ISO)

1,2-dichloroethane (ISO)

1,2-dimethylhydrazine (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-diaminodiphenylmethane (ISO)

4,4'-sulfonyldiphenol (ISO)

acetaldehyde (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (EXP)

aristolochic acid A (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

CGP 52608 (ISO)

chlorpyrifos (ISO)

clofibrate (ISO)

cobalt dichloride (EXP)

copper(II) sulfate (ISO)

crocidolite asbestos (ISO)

cyclosporin A (ISO)

dexamethasone (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (ISO)

dicrotophos (ISO)

epoxiconazole (ISO)

fipronil (EXP)

flavonoids (EXP)

flutamide (EXP)

indometacin (ISO)

L-methionine (ISO)

leflunomide (EXP)

nefazodone (EXP)

nimesulide (EXP)

pentachlorophenol (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (ISO)

piperonyl butoxide (EXP)

pirinixic acid (ISO)

silicon dioxide (ISO)

sodium arsenate (ISO)

sodium arsenite (ISO)

sodium dichromate (EXP)

succimer (ISO)

testosterone (EXP)

tetrachloromethane (EXP)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

valdecoxib (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chromatin remodeling (IBA,ISO)

methylation (IEA)

positive regulation of inflammatory response (IBA,ISO)

positive regulation of interleukin-6 production (ISO)

positive regulation of transcription by RNA polymerase II (IBA)

positive regulation of tumor necrosis factor production (ISO)

regulation of cell proliferation in bone marrow (ISO)

Cellular Component

cytosol (ISO)

nucleus (ISO)

Molecular Function

histone H3K36 methyltransferase activity (IBA)

histone H3K4 methyltransferase activity (IBA,ISO)

histone H4K20 methyltransferase activity (ISO)

protein binding (ISO)

transcription coactivator activity (IBA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
5.	Information Derived from GenBank Report	RGD, Sept. 2003

Additional References at PubMed

PMID:12477932	PMID:24738023	PMID:31308046

Genomics

Comparative Map Data

Setd4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	46,315,340 - 46,344,024 (-)	NCBI		GRCr8
mRatBN7.2	11	32,829,509 - 32,859,162 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	32,838,063 - 32,858,243 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	41,532,237 - 41,552,430 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	34,203,780 - 34,223,971 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	33,364,634 - 33,384,761 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	33,781,869 - 33,803,121 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	33,781,870 - 33,801,999 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	37,373,163 - 37,395,496 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	33,765,399 - 33,785,529 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	33,821,642 - 33,829,414 (-)	NCBI
Celera	11	32,480,548 - 32,500,678 (-)	NCBI		Celera
Cytogenetic Map	11	q11	NCBI

SETD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	21	36,034,541 - 36,060,526 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	21	36,034,541 - 36,079,389 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	21	37,406,839 - 37,432,824 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	21	36,328,709 - 36,358,576 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	21	36,328,709 - 36,358,576	NCBI
Celera	21	22,605,727 - 22,631,704 (-)	NCBI		Celera
Cytogenetic Map	21	q22.12	NCBI
HuRef	21	22,885,338 - 22,911,268 (-)	NCBI		HuRef
CHM1_1	21	36,968,665 - 36,994,622 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	21	34,417,599 - 34,443,584 (-)	NCBI		T2T-CHM13v2.0

Setd4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	93,380,345 - 93,401,693 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	93,380,345 - 93,400,951 (-)	Ensembl		GRCm39 Ensembl
GRCm38	16	93,583,457 - 93,604,791 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	93,583,457 - 93,604,063 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	93,583,705 - 93,604,060 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	93,472,001 - 93,492,343 (-)	NCBI		MGSCv36	mm8
Celera	16	94,665,886 - 94,686,613 (-)	NCBI		Celera
Cytogenetic Map	16	C4	NCBI
cM Map	16	54.52	NCBI

Setd4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955407	35,215,069 - 35,239,511 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955407	35,215,247 - 35,239,488 (-)	NCBI	ChiLan1.0	ChiLan1.0

SETD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	22	32,106,229 - 32,183,633 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	21	26,988,001 - 27,043,555 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	21	22,376,892 - 22,431,610 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	21	35,737,061 - 35,791,155 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	21	35,737,061 - 35,791,156 (-)	Ensembl	panpan1.1		panPan2

SETD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	31	31,283,623 - 31,309,527 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	31	31,150,596 - 31,309,687 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	31	30,383,968 - 30,409,896 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	31	30,581,049 - 30,606,931 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	31	30,442,434 - 30,606,862 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	31	30,452,631 - 30,478,541 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	31	30,466,771 - 30,492,659 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	31	30,957,454 - 30,983,386 (-)	NCBI		UU_Cfam_GSD_1.0

Setd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404971	30,842,836 - 30,866,141 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936500	6,610,597 - 6,625,009 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936500	6,601,811 - 6,624,991 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SETD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	199,564,050 - 199,588,710 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	199,564,048 - 199,589,924 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	209,715,202 - 209,740,816 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SETD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	80,062,582 - 80,105,863 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	80,062,040 - 80,085,474 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666054	7,884,098 - 7,909,732 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Setd4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624745	24,104,617 - 24,148,617 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624745	23,928,041 - 24,148,644 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Setd4
146 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	60
Count of miRNA genes:	59
Interacting mature miRNAs:	60
Transcripts:	ENSRNOT00000002308
Prediction methods:	Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300147	Bp187	Blood pressure QTL 187	3.67		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	11	1	69446234	Rat
724554	Iddm17	Insulin dependent diabetes mellitus QTL 17		0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	11	18976208	86241447	Rat
1598842	Glom10	Glomerulus QTL 10	3.4		kidney glomerulus morphology trait (VT:0005325)	index of glomerular damage (CMO:0001135)	11	1	35331169	Rat
8694376	Bw156	Body weight QTL 156	2.25	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
10755497	Bp388	Blood pressure QTL 388	2.76		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	11	19456205	76331918	Rat
724517	Uae18	Urinary albumin excretion QTL 18	3.7		urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	11	16472047	44285911	Rat
10058952	Gmadr6	Adrenal mass QTL 6	2.29	0.0072	adrenal gland mass (VT:0010420)	both adrenal glands wet weight to body weight ratio (CMO:0002411)	11	22959403	67959403	Rat
1300130	Rf20	Renal function QTL 20	4.44		kidney glomerulus integrity trait (VT:0010546)	kidney glomerulus diameter (CMO:0001166)	11	29528418	60324829	Rat
1558659	Tescar1	Testicular tumor resistance QTL 1	3.9		testis integrity trait (VT:0010572)	percentage of study population developing testis tumors during a period of time (CMO:0001261)	11	1041931	66113562	Rat
2298551	Neuinf10	Neuroinflammation QTL 10	3.7		nervous system integrity trait (VT:0010566)	spinal cord beta-2 microglobulin mRNA level (CMO:0002125)	11	31239134	78851519	Rat
724563	Uae10	Urinary albumin excretion QTL 10	6		urine albumin amount (VT:0002871)	urine albumin level (CMO:0000130)	11	27672410	82846715	Rat
9589032	Epfw10	Epididymal fat weight QTL 10	9.29	0.001	epididymal fat pad mass (VT:0010421)	epididymal fat pad weight to body weight ratio (CMO:0000658)	11	23280456	68280456	Rat
9590313	Scort20	Serum corticosterone level QTL 20	6.51	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	11	23280456	68280456	Rat
8694424	Bw162	Body weight QTL 162	3.8	0.001	body lean mass (VT:0010483)	lean tissue morphological measurement (CMO:0002184)	11	23280456	68280456	Rat
1300110	Stl7	Serum triglyceride level QTL 7	4.64		blood triglyceride amount (VT:0002644)	plasma triglyceride level (CMO:0000548)	11	29528418	82566702	Rat
1641927	Alcrsp10	Alcohol response QTL 10			alcohol metabolism trait (VT:0015089)	blood ethanol level (CMO:0000535)	11	8436674	53436674	Rat

Markers in Region

ORF21

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	32,845,673 - 32,845,874 (+)	MAPPER	mRatBN7.2
Rnor_6.0	11	33,789,481 - 33,789,681	NCBI	Rnor6.0
Rnor_5.0	11	37,381,859 - 37,382,059	UniSTS	Rnor5.0
RGSC_v3.4	11	33,773,011 - 33,773,211	UniSTS	RGSC3.4
Celera	11	32,488,160 - 32,488,360	UniSTS
Cytogenetic Map	11	q11	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001113747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006248028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008768561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597879	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017597880	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039087971	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039087979	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270278	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270280	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270282	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005490970	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AF388528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC079469	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC089907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000002308 ⟹ ENSRNOP00000002308

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	32,838,065 - 32,858,243 (-)	Ensembl
Rnor_6.0 Ensembl	11	33,781,870 - 33,801,999 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000104229 ⟹ ENSRNOP00000082204

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	11	32,838,063 - 32,854,510 (-)	Ensembl

RefSeq Acc Id:

NM_001113747 ⟹ NP_001107219

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,323,894 - 46,344,024 (-)	NCBI
mRatBN7.2	11	32,838,062 - 32,858,190 (-)	NCBI
Rnor_6.0	11	33,781,869 - 33,801,999 (-)	NCBI
Rnor_5.0	11	37,373,163 - 37,395,496 (-)	NCBI
RGSC_v3.4	11	33,765,399 - 33,785,529 (-)	RGD
Celera	11	32,480,548 - 32,500,678 (-)	RGD

Sequence:

show sequence

GTGGAGTGAATGATATCGGCTTGGTCCTGGGCCGAGACCCTGGGCCGCTCTGTGGCGTGCGGCC
ATCACTGGGGTCCGGTGGCGAGCAGGGGACAGGGCTGTAGTGGAACTGCGCGTCCTCGTGTGCC
ACTCGTGGGCTCCTGAACGGACTTGGTGTCCCGCTCCAGACTGACTCATAAAGCAAGTCTTCCT
GCCGAGGTGCCAAGGTCTTCAATTCTTATCCAGCTGGAAAGTGAGGCAGCTTCTCATTACTCTC
CGTTGAGCGGGACACAAGAGGCTCCGTCCTGGGTTAGCATGCAGAGACGGAGAGGAAGAACAGA
GAGGGTGAGGAGGCGACGTCGAAGCTCTGGCTCAAGAGGAGTGAATGAGAGCTGCAGATCTGAA
TTTATAGAGCTAAGAAAATGGCTGAAAGAGAGGAAGTTTGAAGATACAGGCTTATTAGTACCTG
CCTGCTTTCCAGGAACAGGAAGAGGGCTGATGAGCAAAGCGTCGCTGCAGGAGGGCCAGGTGAT
TATCTCACTGCCTGAGAGCTGTCTGCTCACCACGGACACTGTGATCCGAAGCTCCGTAGGGCCC
TACATTAAGAAGTGGAAGCCTCCGGTGTCTCCTCTGCTGGCTTTGTGTACCTTTTTGGTCTCAG
AAAGACATGCAGGCAGTCATTCCCTCTGGAAGTCTTACCTGGACATTTTACCCAAGTCATATAC
CTGCCCGGTGTGCTTGGAGCCAGAAGTGGTGGATCTTCTTCCGGGACCTTTGAGGGCGAAGGCG
GAAGAGCAGAGAGCCCGCGTGCAGGATTTGTTTGCCTCCTCTAGAGACTTCTTCTCTACCCTGC
AGCCTCTGTTTGCAGAGTCTGTGGACAGCATTTTCAGCTACCATGCCTTCCTCTGGGCCTGGTG
CACAGTGAACACCAGAGCTGTGTACCTGAAGTCTAGGAGGCAGGAGTGCCTTTCCTCAGAGCCG
GACACGTGTGCCCTTGCTCCGTTCCTGGATCTGCTGAATCACAGCCCACATGTCCAGGTGAAAG
CAGCATTCAACGAGAAGACCAGGTGCTATGAGATTAGAACAGCCTCTCGCTGTAGGAAGCACCA
GGAGGCGTTCATCTGCTACGGTCCCCATGACAACCAGCGGCTGCTCCTGGAGTATGGCTTTGTT
GCCTTTGGCAATCCTCACGCATGTGTTCCTGTCTCAGGAGAGATGCTGCTCAAGTACCTCCCGC
CAGCCGATAAGCAGGTGCACAAGAAGCTGTCCATCTTGGAGGATCATGGCTTCACAGGAAATTT
GACGTTTGGATGGGATGGACCATCTTGGAGGTTGCTCACAGCTCTCAAGTTGTTGTGTCTGGAA
GCCGAGCGGTTTACGTCCTGGAAGAAGGTGCTCATTGGTGACGTAATCTCCGATAGGAATGAGA
AGGCAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGATTTCATTGCGGAGATTCACTCCGAGCT
GCGCAAGGTTTCTGACATGAAGGAAAGGAAAGGATCGCTGATAAGTCAGCTCTGTTTGGTGGAA
GCTTTGCGGATGGAAGAGCTGCGGATTCTTCAGGCTTCTGCTGAGATCCTGAGTAGTTCGCTGG
CCCCCTTGTCCTGAGTTCTCGGGATCACGTGGCCCCTCCCATGGAGGGTGCTCCAGCTGCATTT
TCACTGAGGTTGGAATAAATGGATTATATGACATCAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039087971 ⟹ XP_038943899

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,323,894 - 46,341,884 (-)	NCBI
mRatBN7.2	11	32,838,062 - 32,856,053 (-)	NCBI

RefSeq Acc Id:

XM_039087979 ⟹ XP_038943907

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,323,894 - 46,341,884 (-)	NCBI
mRatBN7.2	11	32,838,062 - 32,856,053 (-)	NCBI

RefSeq Acc Id:

XM_063270278 ⟹ XP_063126348

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,323,894 - 46,341,884 (-)	NCBI

RefSeq Acc Id:

XM_063270280 ⟹ XP_063126350

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,323,894 - 46,341,668 (-)	NCBI

RefSeq Acc Id:

XM_063270281 ⟹ XP_063126351

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,327,472 - 46,341,855 (-)	NCBI

RefSeq Acc Id:

XM_063270282 ⟹ XP_063126352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,329,498 - 46,341,855 (-)	NCBI

RefSeq Acc Id:

XR_005490970

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,315,340 - 46,341,855 (-)	NCBI
mRatBN7.2	11	32,829,509 - 32,859,162 (-)	NCBI

RefSeq Acc Id:

XR_594989

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	11	46,327,499 - 46,341,855 (-)	NCBI
mRatBN7.2	11	32,838,062 - 32,859,162 (-)	NCBI
Rnor_6.0	11	33,781,869 - 33,803,121 (-)	NCBI

Sequence:

show sequence

GTTGTGAGCTGCCATGTAGGTGCTGGGCACCAGAGCATTGCTCCTAACTGTTGAGAAATCCCTA
GCATCCCACCCTTGACATTTTATGGAGGTGCTTGGAGAATCACATGTATTGTACGAAGTAATCC
AGAAATTACATGTATTCACAAAGCTATAGCAAAATATCACATATCAACAGCAAGACAAGCTTCC
AATTCTATTCGCACTTCCCTTTTGTGATCCCAGGTAATTGTATTTATTCTATATGATTTCATTG
GCGTTTTAGGTTTTGTGCCCATCACAGTTAAGACACAAAACACTCCATCAGCACGAGTATCCTT
CTTGTTGGTCTTTCTTGAGTAAACAGCCTTCCATTCTCTTGGTACTCCGCATTGTTACACAGGT
GAGGTCATACAGTGCCTGATTGGGTAACTGCTTTGTCATTCAGGATGATTAAGCAGTTTGTGTT
TTTCTCTTTTATACCAGTGACTGTTTGGTCTGCAATTTCCATACCTCCAGATACTTTCTCTGTG
GCTGCAGTGAGACAGATGCTCATTGAATTATTTCAGTACAAGAGCCATTCAGGGGTAGTTCAGG
ATGTATAAGGAACCTAAAGAGTAGTGAATGACGATAACGGTGCGCCTGGGTCTGGTAGCTGGAG
GGCAGGGCAAAGTGGGGACCAGGTAAGCCAGCCAGCCTGGTGGAGGGGGCACACACAGGGAAGT
CAGAGAAAGAAAGGACACGGTGAGGAAAGAATTCCCTTTGGCTCTTTGGAGCAACGGTCAGCAG
CTATACTCATAGCCTTACGGTTTTGGTGTGGAGACCTTAGAACTGCGCATGCGCGTGGCAGAGG
CGCAGGCTCGCCGCACGCAGTCGTTTTCTCCACCGCTTGGGGAACCGCCTGCATCTGCACTCCT
GTTCGCCACCGTACCTAAGTTAAACAGAGCACTTCCGGTGGGCCTGGCGTTGCCCGGGTAACAG
GAGAGGAGTTCCGTTGGCTTTTCTGAGTTCTGTCTGGATTCAGACCCCAATTTCCTGTGCGGGC
GAGTAACCTCTCCCTGACCGGAAGTCAGGGCAGGGCGACTACTGCGCAGGCGTGGTGTGTGGCC
TGGAGGCCCGGGTTTGTTAGCTGCTGCGGAAGATGTGGAGTGAATGATATCGGCTTGGTCCTGG
GCCGAGACCCTGGGCCGCTCTGTGGCGTGCGGCCATCACTGGGGTCCGGTGGCGAGCAGGGGAC
AGGGCTGTAGTGGAACTGCGCGTCCTCGTGTGCCACTCGTGGGCTCCTGAACGGACTTGGTGTC
CCGCTCCAGACTGACTCATAAAGCAAGTCTTCCTGCCGAGGTGCCAAGGTCTTCAATTCTTATC
CAGCTGGAAAGTGAGGCAGCTTCTCATTACTCTCCGTTGAGCGGGACACAAGAGGCTCCGTCCT
GGGTTAGCATGCAGAGACGGAGAGGAAGAACAGAGAGGGTGAGGAGGCGACGTCGAAGCTCTGG
CTCAAGAGGAGTGAATGAGAGCTGCAGATCTGAATTTATAGAGCTAAGAAAATGGCTGAAAGAG
AGGAAGTTTGAAGATACAGGCTTATTAGTACCTGCCTGCTTTCCAGGAACAGGAAGAGGGCTGA
TGAGCAAAGCGTCGCTGCAGGAGGGCCAGGTGATTATCTCACTGCCTGAGAGCTGTCTGCTCAC
CACGGACACTGTGATCCGAAGCTCCGTAGGGCCCTACATTAAGAAGTGGAAGCCTCCGGTGTCT
CCTCTGCTGGCTTTGTGTACCTTTTTGGTCTCAGAAAGACATGCAGGCAGTCATTCCCTCTGGA
AGTCTTACCTGGACATTTTACCCAAGTCATATACCTGCCCGGTGTGCTTGGAGCCAGAAGTGGT
GGATCTTCTTCCGGGACCTTTGAGGGCGAAGGCGGAAGAGCAGAGAGCCCGCGTGCAGGATTTG
TTTGCCTCCTCTAGAGACTTCTTCTCTACCCTGCAGCCTCTGTTTGCAGAGTCTGTGGACAGCA
TTTTCAGCTACCATGCCTTCCTCTGGGCCTGGTGCACAGTGAACACCAGAGCTGTGTACCTGAA
GTCTAGGAGGCAGGAGTGCCTTTCCTCAGAGCCGGACACGTGTGCCCTTGCTCCGTTCCTGGAT
CTGCTGAATCACAGCCCACATGTCCAGGTGAAAGCAGCATTCAACGAGAAGACCAGGTGCTATG
AGATTAGAACAGCCTCTCGCTGTAGGAAGCACCAGGAGGCGTTCATCTGCTACGGTCCCCATGA
CAACCAGCGGCTGCTCCTGGAGTATGGCTTTGTTGCCTTTGGCAATCCTCACGCATGTGTTCCT
GTCTCAGGAGGTTGGAGTGGCCGATGGTTATTTCCTATTGTAATGGGAGTGCCCTCATAGGCAA
CATTCACTTTTCTCAGGCAGAGCCCGCCTGGCCTTCCTGATTGGAATTTCTGTTGAAGTAAAAT
CAGCACAACTGATTGATACTGATTGATCAGATCATTGGGTGATGATCAGATTGATCATCAGAGT
GATGAACCAGGACGGTGGAGTGGAAGATTGCTGCTTAGCTGATGAGCATGCTGGGAGGAATCTT
TGTTCTGAGGTGTCATTGTTGCTGCAGGTGGAATACGCCTGTCAAAAGGAGTAGAAACGTCCTA
AGCACTTATGCAGAAGCAGCTAAGCCTTGAGCAAGCCGTTTGTGAGAGATTTCATTGCCCAGCG
TGTATTCGAGGCATTTGTATAGGCTAGGATGAGTGTAGGCACTCTGATGAGATGCTCTCTACCT
TTGTAGGCAGAATACCAACTGTGCTTGAGAGTAGAGATAGAAGGGCCAGACTGGGGCAGTGATG
TGCTTCAGTGGAAAGGTGCTCACCACAGAGCGTGAGGACCCTACGGGGTGGAAGGAGAGAGCTG
GCTTCTGCACTTTGTCCTCTGACCTTCCAGATGCTGCTCAAGTACCTCCCGCCAGCCGATAAGC
AGGTGCACAAGAAGCTGTCCATCTTGGAGGATCATGGCTTCACAGGAAATTTGACGTTTGGATG
GGATGGACCATCTTGGAGGTTGCTCACAGCTCTCAAGTTGTTGTGTCTGGAAGCCGAGCGGTTT
ACGTCCTGGAAGAAGGTGCTCATTGGTGACGTAATCTCCGATAGGAATGAGAAGGCAAGCTTGG
GCGTGGCCCAGAAAATATGCTCTGATTTCATTGCGGAGATTCACTCCGAGCTGCGCAAGGTTTC
TGACATGAAGGAAAGGAAAGGATCGCTGATAAGTCAGCTCTGTTTGGTGGAAGCTTTGCGGATG
GAAGAGCTGCGGATTCTTCAGGCTTCTGCTGAGATCCTGAGTAGTTCGCTGGCCCCCTTGTCCT
GAGTTCTCGGGATCACGTGGCCCCTCCCATGGAGGGTGCTCCAGCTGCATTTTCACTGAGGTTG
GAATAAATGGATTATATGACATCA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001107219	(Get FASTA)	NCBI Sequence Viewer
	XP_038943899	(Get FASTA)	NCBI Sequence Viewer
	XP_038943907	(Get FASTA)	NCBI Sequence Viewer
	XP_063126348	(Get FASTA)	NCBI Sequence Viewer
	XP_063126350	(Get FASTA)	NCBI Sequence Viewer
	XP_063126351	(Get FASTA)	NCBI Sequence Viewer
	XP_063126352	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58670	(Get FASTA)	NCBI Sequence Viewer
	AAL57769	(Get FASTA)	NCBI Sequence Viewer
	EDM10779	(Get FASTA)	NCBI Sequence Viewer
	EDM10780	(Get FASTA)	NCBI Sequence Viewer
	EDM10781	(Get FASTA)	NCBI Sequence Viewer
	EDM10782	(Get FASTA)	NCBI Sequence Viewer
	EDM10783	(Get FASTA)	NCBI Sequence Viewer
	EDM10784	(Get FASTA)	NCBI Sequence Viewer
	EDM10785	(Get FASTA)	NCBI Sequence Viewer
	EDM10786	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000002308.5
	ENSRNOP00000082204.1

RefSeq Acc Id:

NP_001107219 ⟸ NM_001113747

- UniProtKB:

B0BN36 (UniProtKB/TrEMBL), A6JLL4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQRRRGRTERVRRRRRSSGSRGVNESCRSEFIELRKWLKERKFEDTGLLVPACFPGTGRGLMSK
ASLQEGQVIISLPESCLLTTDTVIRSSVGPYIKKWKPPVSPLLALCTFLVSERHAGSHSLWKSY
LDILPKSYTCPVCLEPEVVDLLPGPLRAKAEEQRARVQDLFASSRDFFSTLQPLFAESVDSIFS
YHAFLWAWCTVNTRAVYLKSRRQECLSSEPDTCALAPFLDLLNHSPHVQVKAAFNEKTRCYEIR
TASRCRKHQEAFICYGPHDNQRLLLEYGFVAFGNPHACVPVSGEMLLKYLPPADKQVHKKLSIL
EDHGFTGNLTFGWDGPSWRLLTALKLLCLEAERFTSWKKVLIGDVISDRNEKASLGVAQKICSD
FIAEIHSELRKVSDMKERKGSLISQLCLVEALRMEELRILQASAEILSSSLAPLS

hide sequence

Ensembl Acc Id:

ENSRNOP00000002308 ⟸ ENSRNOT00000002308

RefSeq Acc Id:	XP_038943907 ⟸ XM_039087979
- Peptide Label:	isoform X2
- UniProtKB:	A6JLL5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038943899 ⟸ XM_039087971
- Peptide Label:	isoform X1
- UniProtKB:	A6JLL5 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000082204 ⟸ ENSRNOT00000104229

RefSeq Acc Id:	XP_063126348 ⟸ XM_063270278
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063126350 ⟸ XM_063270280
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_063126351 ⟸ XM_063270281
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_063126352 ⟸ XM_063270282
- Peptide Label:	isoform X4

Protein Domains

SET

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-B0BN36-F1-model_v2	AlphaFold	B0BN36	1-439	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698071

Promoter ID:

EPDNEW_R8596

Type:

initiation region

Name:

Setd4_1

Description:

SET domain containing 4

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	11	33,802,024 - 33,802,084	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:619899	AgrOrtholog
BioCyc Gene	G2FUF-21814	BioCyc
Ensembl Genes	ENSRNOG00000001699	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000002308.6	UniProtKB/TrEMBL
	ENSRNOT00000104229.1	UniProtKB/TrEMBL
Gene3D-CATH	3.90.1420.10	UniProtKB/TrEMBL
	set domain protein methyltransferase, domain 1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7122760	IMAGE-MGC_LOAD
	IMAGE:8370827	IMAGE-MGC_LOAD
InterPro	Lys_MTase_YDR198C_prd	UniProtKB/TrEMBL
	Rubisco_LSMT_subst-bd_sf	UniProtKB/TrEMBL
	Rubisco_subst-bd	UniProtKB/TrEMBL
	SET_dom	UniProtKB/TrEMBL
	SET_dom_sf	UniProtKB/TrEMBL
	SETD3_SETD6_MTase	UniProtKB/TrEMBL
	SETD4_SET	UniProtKB/TrEMBL
KEGG Report	rno:245975	UniProtKB/TrEMBL
MGC_CLONE	MGC:187669	IMAGE-MGC_LOAD
	MGC:95029	IMAGE-MGC_LOAD
NCBI Gene	245975	ENTREZGENE
PANTHER	SET DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	UniProtKB/TrEMBL
Pfam	Rubis-subs-bind	UniProtKB/TrEMBL
	SET	UniProtKB/TrEMBL
PhenoGen	Setd4	PhenoGen
PIRSF	Lys_MTase_YDR198C_prd	UniProtKB/TrEMBL
PROSITE	SET	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000001699	RatGTEx
Superfamily-SCOP	SSF82199	UniProtKB/TrEMBL
UniProt	A0A8I5ZUI5_RAT	UniProtKB/TrEMBL
	A6JLL4	ENTREZGENE, UniProtKB/TrEMBL
	A6JLL5	ENTREZGENE, UniProtKB/TrEMBL
	B0BN36	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-09	Setd4	SET domain containing 4	LOC102556275	uncharacterized LOC102556275	Data merged from RGD:7612584	737654	PROVISIONAL
2013-12-18	LOC102556275	uncharacterized LOC102556275			Symbol and Name status set to provisional	70820	PROVISIONAL
2008-02-22	Setd4	SET domain containing 4	Rda279	hypothetical protein RDA279	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-11-17	Rda279	hypothetical protein RDA279			Symbol and Name status set to approved	1299863	APPROVED
2002-08-07	Rda279	hypothetical protein RDA279			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar