User profiles for Eric A. Sobie
Eric A SobieMount Sinai Verified email at mssm.edu Cited by 6546 |
Parameter sensitivity analysis in electrophysiological models using multivariable regression
EA Sobie - Biophysical journal, 2009 - cell.com
Computational models of electrical activity and calcium signaling in cardiac myocytes are
important tools for understanding physiology. The sensitivity of these models to changes in …
important tools for understanding physiology. The sensitivity of these models to changes in …
Termination of cardiac Ca2+ sparks: an investigative mathematical model of calcium-induced calcium release
A Ca 2+ spark arises when a cluster of sarcoplasmic reticulum (SR) channels (ryanodine
receptors or RyRs) opens to release calcium in a locally regenerative manner. Normally …
receptors or RyRs) opens to release calcium in a locally regenerative manner. Normally …
Orphaned ryanodine receptors in the failing heart
Heart muscle is characterized by a regular array of proteins and structures that form a repeating
functional unit identified as the sarcomere. This regular structure enables tight coupling …
functional unit identified as the sarcomere. This regular structure enables tight coupling …
[HTML][HTML] The Ca2+ leak paradox and “rogue ryanodine receptors”: SR Ca2+ efflux theory and practice
EA Sobie, S Guatimosim, L Gómez-Viquez… - Progress in biophysics …, 2006 - Elsevier
Ca 2+ efflux from the sarcoplasmic reticulum (SR) is routed primarily through SR Ca 2+ release
channels (ryanodine receptors, RyRs). When clusters of RyRs are activated by trigger Ca …
channels (ryanodine receptors, RyRs). When clusters of RyRs are activated by trigger Ca …
The library of integrated network-based cellular signatures NIH program: system-level cataloging of human cells response to perturbations
The Library of Integrated Network-Based Cellular Signatures (LINCS) is an NIH Common
Fund program that catalogs how human cells globally respond to chemical, genetic, and …
Fund program that catalogs how human cells globally respond to chemical, genetic, and …
Regression analysis for constraining free parameters in electrophysiological models of cardiac cells
AX Sarkar, EA Sobie - PLoS computational biology, 2010 - journals.plos.org
A major challenge in computational biology is constraining free parameters in mathematical
models. Adjusting a parameter to make a given model output more realistic sometimes has …
models. Adjusting a parameter to make a given model output more realistic sometimes has …
A generalized activating function for predicting virtual electrodes in cardiac tissue
To fully understand the mechanisms of defibrillation, it is critical to know how a given electrical
stimulus causes membrane polarizations in cardiac tissue. We have extended the concept …
stimulus causes membrane polarizations in cardiac tissue. We have extended the concept …
Local recovery of Ca2+ release in rat ventricular myocytes
Excitation–contraction coupling in the heart depends on the positive feedback process of
Ca 2 + ‐induced Ca 2 + release (CICR). While CICR provides for robust triggering of Ca 2 + …
Ca 2 + ‐induced Ca 2 + release (CICR). While CICR provides for robust triggering of Ca 2 + …
Exploiting mathematical models to illuminate electrophysiological variability between individuals
AX Sarkar, DJ Christini, EA Sobie - The Journal of physiology, 2012 - Wiley Online Library
Across individuals within a population, several levels of variability are observed, from the
differential expression of ion channels at the molecular level, to the various action potential …
differential expression of ion channels at the molecular level, to the various action potential …
A multi-center study on the reproducibility of drug-response assays in mammalian cell lines
…, G Jayaraman, EU Azeloglu, R Iyengar, EA Sobie… - Cell systems, 2019 - cell.com
Evidence that some high-impact biomedical results cannot be repeated has stimulated interest
in practices that generate findable, accessible, interoperable, and reusable (FAIR) data. …
in practices that generate findable, accessible, interoperable, and reusable (FAIR) data. …