GenomeNet

Database: Pfam
Entry: DUF2606
LinkDB: DUF2606
Original site: DUF2606 
#=GF ID   DUF2606
#=GF AC   PF10794.14
#=GF DE   Protein of unknown function (DUF2606)
#=GF AU   Finn RD;0000-0001-8626-2148
#=GF SE   PRODOM
#=GF GA   25.40 25.40;
#=GF TC   25.50 25.50;
#=GF NC   24.90 25.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch --cpu 4 -E 1000 -Z 81514348 HMM pfamseq
#=GF TP   Family
#=GF WK   Domain_of_unknown_function
#=GF CL   CL0287
#=GF RN   [1]
#=GF RM   16220534
#=GF RT   Proteomics-based consensus prediction of protein retention in a
#=GF RT   bacterial membrane.
#=GF RA   Tjalsma H, van Dijl JM;
#=GF RL   Proteomics. 2005;5:4472-4482.
#=GF DR   INTERPRO; IPR019730;
#=GF DR   SO; 0100021; polypeptide_conserved_region;
#=GF CC   Family of bacterial proteins with unknown function. These
#=GF CC   proteins have been classified as membrane proteins
#=GF SQ   9
#=GS A0A0A1MM71_9BACI/2-116   AC A0A0A1MM71.1
#=GS A0A0M4FN83_9BACI/2-116   AC A0A0M4FN83.1
#=GS Q81HL4_BACCR/1-127       AC Q81HL4.1
#=GS YBFJ_BACSU/1-130         AC O31451.1
#=GS A0A366HYB6_9FIRM/16-137  AC A0A366HYB6.1
#=GS A0A554A051_9BACI/3-102   AC A0A554A051.1
#=GS A0A3S9P449_9BACT/1-125   AC A0A3S9P449.1
#=GS A0A2I7SS90_LACSH/8-132   AC A0A2I7SS90.1
#=GS A0A248THE8_9BACI/1-107   AC A0A248THE8.1
A0A0A1MM71_9BACI/2-116              ........irllsclt-------------------IF--FLVLFGC...QQEESSNEA---NLQSGVVFIILNKDQSPVENFTITIVQT--S--EPSPDIGV.K..PKPTDVNGRTEMELAEG.ETYEAAL.V..I..SDyTTQYEEFTVSEDKKDNEFT---fil......................
A0A0M4FN83_9BACI/2-116              .........lkfisnc----------------LLFTLFFVL-ISAC...SSA--NNKEEEQPVMATVTINVSDKDNKPLKNIKVT------EDLHTSNDIGH.E..IGTTDKDGNIKWET-QT.GKYDVIL.Y..DvkAG.NDSEHTINITEDTT--------tihlvy...................
Q81HL4_BACCR/1-127                  ................MFLIILKNG-LNKYNKLLWILFCVLVIIVM...TSYIVNNEKKFSKVVNSVTFHVKNKEKQPIKDFEIILMKDESP--EPSKEIGI.S..IGKTDEEGKVIWRNVRT.GKYIVFL.P..N..NE.T----QMVMINDRDATKKINIS.........................
YBFJ_BACSU/1-130                    ................MYSTIFNIGQINKYSKLA-IFMSILFLCGC...SSQTHSSQK---ETTIPVTLHVEDAKGLPVEGVQVTIVKAPSSDEEPSTEIGE.I..LGKTDKNGDIKWDTGRK.GDYSVAL.T..K..GE.TSVTHHISLTEDKKDHAIPLVF.........................
A0A366HYB6_9FIRM/16-137             ..........ralkla-----------NKEGFYVAIFLCITLVATM...LVYFVNDNASNKDIANKDTAIVEQETTDPVDNTNAIIDEDTIGAEEPATETAT.Q..VDKTTKEEEPKTEEPKT.E------.-..-..--.----------------------qpkeqapqsntnlkdmvspvgakev
A0A554A051_9BACI/3-102              ............rsfy----------------LCFVLVFSLFIAAC...SQESEEP---NVLVVEDVTFKFIDQDGDPVSHVQIPMDNDIR---DGSKEIGR.F..LGTTDSEGMIYIDEMEA.RTYK---.-..-..--.----------------------leaynrsftidey............
A0A3S9P449_9BACT/1-125              ........mkktsiys------------------VI---VLMICVCistSFTTISAEKPFALIGLQVT--VLDEKGNVIEGAEVTLYANEDD--AWDEENGMkA..KDKTNKNGRVKFTKGLKeQAYYVVA.K..K..GD.Q---------------------vsedglkssklsknkmnkinviis.
A0A2I7SS90_LACSH/8-132              .....yifiklkyrcf----------IERRSKLR-ILAGILACFIL...AGCAHEESK--QPKLSPVTIRVLDQEGKPVSRIAVGIE-AVIP-EEERDSVGA.IpkAGLTNENGEIKDQLVPG.KKYIIQL.GskK..KE.VVIT------------------dkpmivelt................
A0A248THE8_9BACI/1-107              ......mkkilavvli--------------------------FLLV...GCQQ------VSQIKITVTITVVDTSNKLVQNIEVSLLDKSSD-----SEQGI.Q..LGSTDSEGTITGKLKVG.VTYEAALiI..N..DE.TTQYEEFIVSEEKDSEN-----qftf.....................
#=GC seq_cons                       ..........hh..hh................hh.Ihh.lLhlhss...uspt.sspt..t.lhtsVThpVhDpcspPVcshplsl.ps..s..-susElGh.t..lGpTDcpGclchcpsps.tpY.shL.h..p..s-.s..............................................
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