Anolis carolinensis (green anole): 100563486
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Entry
100563486 CDS
T01608
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs00100
Steroid biosynthesis
acs01100
Metabolic pathways
Module
acs_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100563486
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
acs01006
]
100563486
Enzymes [BR:
acs01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100563486
Prenyltransferases [BR:
acs01006
]
Terpene biosynthesis
Squalene/phytoene synthase
100563486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
vRNAP_plug
Motif
Other DBs
NCBI-GeneID:
100563486
NCBI-ProteinID:
XP_008116142
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Position
Un
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AA seq
452 aa
AA seq
DB search
MELVLSLGFFLQKTNIIRDYNEDQLVGREFWPREKAMEVLKEWLGHPKELYNLAWFKMGG
YKTVMPKMDQDVLSQSLCYKYLNQTGRTAALVIQMLDREVRHAVCIFYLVLRAMDTVEDD
MTISLETKIPILQKFHSYLYQPEWRFMGSNDKDKQILEDFPTISLEFRKLDKVYQDVFAD
ICPKVGLGLAKFLEKEVESMKDWDMYCYYGTALAFIGFSQIFSASKLEDPVIGQDVELVL
SLGFFLQKTNIIRDYHEDQLMGREFWPREVWSKYAKKLSDLAKPENINKAVQCMNELIIN
ALHHVPNILTFLSRVKNQSIFNFYAVAQVMAIATLAACYNNPQVFQGAVKIRKGQAITLM
MDATNIQAVKAIMFQYLEEIYHKIPSMDPSSTRTQQIVTSVHSMSMPXGTLNYRTHYSSI
YLSCVMLSAAMAWHYMSIALKVTEKYVHADKY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgtgctctccttggggtttttcctgcagaaaaccaacatcatccgggattac
aatgaagaccaacttgtgggcagagagttttggccccgagagaaagccatggaagtgttg
aaagaatggctgggtcaccccaaggaactctacaatttggcgtggttcaagatgggaggt
tacaagaccgtgatgcccaagatggaccaggacgtgctgagccaaagtctctgctataaa
tacttgaaccagactggacgaaccgctgccctagtaatccagatgctcgacagggaagtg
cgccatgcagtttgcatcttctacttggttctccgggcaatggacacggtggaggatgac
atgacaattagcttggaaaccaagattcccattttacagaagttccactcttacctgtat
cagccagagtggcgattcatgggcagcaatgacaaggacaagcaaatactggaggatttc
ccaacgatctccttggaattccggaagctggataaggtctatcaggatgtatttgctgac
atttgccccaaagtgggtcttggattggccaagttcttagagaaagaggtggaatctatg
aaagattgggacatgtactgttactatggcaccgccctggcattcattggcttctctcaa
atcttctctgcatctaaactggaagaccctgtcattggtcaggatgtggaacttgtgctc
tccttagggtttttcctgcagaaaaccaacatcatccgggattaccatgaagaccaactt
atgggcagagagttttggccccgagaggtgtggagcaagtatgcaaagaagttatcagat
ctagccaagcctgagaacatcaacaaggctgtccagtgtatgaacgagctgatcatcaat
gccctgcatcatgtccccaacatcttgacattcttgtccagagtgaaaaaccagagtata
ttcaacttctatgccgtcgcccaggtaatggccattgccaccttggcagcttgctacaac
aacccgcaagtcttccaaggagcagtgaagatccggaaggggcaagccatcacgctgatg
atggatgccaccaacatccaggccgtcaaggctatcatgttccagtacttggaagagatc
taccacaagatacccagcatggacccttcctccaccagaacccaacaaattgtcacctct
gtccactccatgagcatgcctngggggacgctaaactatcgaacccattactcttccatc
tatttgtcctgtgtgatgctttcagcagctatggcctggcattatatgagcatagcattg
aaggtgactgagaaatatgtgcatgctgacaagtactga
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