Arabidopsis lyrata (lyrate rockcress): 9308135
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Entry
9308135 CDS
T01578
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
aly
Arabidopsis lyrata (lyrate rockcress)
Pathway
aly00600
Sphingolipid metabolism
aly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aly00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
9308135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aly01007
]
9308135
Enzymes [BR:
aly01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
9308135
Amino acid related enzymes [BR:
aly01007
]
Aminotransferase (transaminase)
Class II
9308135
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
9308135
NCBI-ProteinID:
XP_002872066
UniProt:
D7M2B9
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MITIPYLTAVSTYFSYGLLFAFGQLRDFFRRFIDWWLTSNLQGYAPICLGHEDFYIRRLY
HRIQDCFERPISSAPDAWFDVVERYSNDNNKTLKRTTKTSRCLNLGSYNYLGFGSFDEYC
TPRVIESLKKFSASTCSSRVDAGTTSVHAELEECVTRFVGKPAAVVFGMGYATNSAIIPV
LIGKGGLIISDSLNHSSIVNGARGSGATIRVFQHNTPSHLERVLREQIAEGQPRTHRPWK
KIIVVVEGIYSMEGEICHLPEVVAICKKYKAYVYLDEAHSIGAIGETGKGICELLGVDTA
DVDVMMGTFTKSFGSCGGYIAGSKELIQYLKHQCPAHLYATSIPTPSAQQIISAIKVILG
EDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLR
QKVAVVVVGFPATPLLLARARICISASHSREDLIRALKVISKVGDLSGIKYFPAEPKKIE
QSKNDIKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgataacgatcccttatctaaccgctgtatcaacctacttcagctacggattgctcttt
gcttttggccagctccgcgatttcttccgccgcttcattgattggtggctcactagcaat
ctccagggatacgcgccgatctgtttggggcatgaggatttttatattaggcgattgtat
catcggattcaggattgttttgaacgacctatatcgagtgcacctgatgcttggtttgat
gtggtcgagcgctactctaatgataacaacaagacgcttaagcgaacaacaaagactagc
aggtgcctcaatttggggtcctacaattatcttgggtttggttcttttgatgaatattgc
acacctcgtgttattgagtccttgaagaagttttcagcaagtacatgtagctctcgtgtc
gatgcaggaactacatcagtgcatgcagaacttgaggaatgtgttactaggtttgttgga
aagcctgctgctgttgtttttggcatgggctatgcaacaaactcagctatcattccagtc
ttgattggaaagggagggttgataataagtgattccttgaaccatagttcgattgtcaat
ggtgctcgaggttcaggagccactatccgtgttttccagcataacacgccttcccatttg
gaacgagttttgagagagcaaattgcagaaggtcaacctaggacgcatcgaccatggaag
aaaattattgttgttgttgaaggtatttacagcatggaaggagagatctgtcatctgcct
gaagttgtcgccatatgcaagaagtataaggcatatgtttatttggatgaagctcacagc
attggggcaattggtgaaacaggaaagggtatttgtgaacttctgggagttgacacagct
gatgtagacgtaatgatgggaacctttacaaaatcttttggctcttgtggtggctatatt
gctggatctaaggagctcatccaatatttgaagcatcaatgcccagctcacctctacgca
acatctataccaactccttccgcacaacaaatcatttctgccattaaagttattctggga
gaggatggttcaaaccgaggagcacaaaagctggcaagaatacgtgagaacagcaacttt
ttccgggcagagctgcagaagatgggatttgaggtacttggagacaatgattccccagtc
atgccaataatgctttacaacccagcaaaaatcccagctttctcaagagaatgtctgcga
caaaaagtggcagtggtggtcgtgggtttcccagctacacctctactgctggctagggca
cgtatttgcatctctgcatctcattcaagagaagatcttataagagcccttaaggttata
agcaaagtaggtgaccttagcggaatcaaatatttcccggcagagccgaagaagatagaa
cagtcaaaaaatgacatcaagttggattga
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integrated database retrieval system
