Amycolatopsis mediterranei U32: AMED_6370
Help
Entry
AMED_6370 CDS
T01269
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
amd
Amycolatopsis mediterranei U32
Pathway
amd00071
Fatty acid degradation
amd00310
Lysine degradation
amd00362
Benzoate degradation
amd00380
Tryptophan metabolism
amd01100
Metabolic pathways
amd01110
Biosynthesis of secondary metabolites
amd01120
Microbial metabolism in diverse environments
Module
amd_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
amd00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
AMED_6370 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
AMED_6370 (gcdH)
00380 Tryptophan metabolism
AMED_6370 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AMED_6370 (gcdH)
Enzymes [BR:
amd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
AMED_6370 (gcdH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-ProteinID:
ADJ48104
UniProt:
A0A0H3DEP6
LinkDB
All DBs
Position
7044625..7045821
Genome browser
AA seq
398 aa
AA seq
DB search
MTMEALEGQLTADFYNFETLLGDDERKLLVKAREFMRTDVKPLVNENWEAGTFPKELIGM
FRESGLAGLPYEGYGEHKPAVSHLLTGMMAMEMSRTDASVATFFGVHNGLAMYSIASGGS
QEQRDRWLPEMAAMDKIGAFAMTEPLGGSDVAGGMRTTAKRDGDSWILNGAKKWIGNATF
ADYVVVWARDLDDNHVKGFVVEKGTPGFVAEKIQGKTAFRIVENAEITLTDVRVPEENRL
QGINSFRDVAEILRATRGGVAWQALGVMIGAYELALDYAKERTQFGRPIARFQLVQDLLV
KSLGNITASWGMLVQLARLQDAGIFQDEHSSLAKAFVTARMREVVAWSREIFGGNGIVLE
YDVARFFADAEAIYSFEGTREMNTLIVGKAITGQSAFV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggaagcactcgaaggccagctgaccgccgacttctacaacttcgaaacgctg
ctgggcgacgacgagcgcaagctgctcgtcaaggcgcgcgagttcatgcgcaccgacgtc
aagccgctggtgaacgagaactgggaagccggcaccttcccgaaggaactgatcgggatg
ttccgggagtcgggcctggcgggcctgccctacgagggctacggcgagcacaagccggcg
gtcagccacctgctcaccggcatgatggcgatggagatgagccgcacggacgcttcggtg
gcgacgttcttcggtgtccacaacggactcgcgatgtactcgatcgcgagcggcggcagc
caggagcagcgcgaccgctggctcccggaaatggccgcgatggacaagatcggcgcgttc
gcgatgaccgaaccgctcggcggctccgacgtcgccggtggcatgcgcaccacggccaag
cgagacggtgacagctggatcctcaacggcgccaagaagtggatcggcaacgcgactttc
gccgactacgtcgtggtgtgggcccgggacctcgacgacaaccacgtcaaggggttcgtc
gtcgagaagggcacgccgggcttcgtggcggagaagatccagggcaagacggcgttccgg
atcgtcgaaaacgccgaaatcaccctgaccgacgtccgcgttccggaagagaaccgcctg
cagggcatcaactccttccgcgacgtcgccgagatcctgcgcgccacccgcggcggtgtg
gcctggcaggcgctgggcgtgatgatcggcgcctacgagctcgcgctggactacgccaag
gagcgcacgcagttcggccggccgatcgcccgcttccagctggtgcaggacctgctcgtc
aagagcctcggcaacatcaccgcctcctggggcatgctggtgcagctcgcccgcctgcag
gacgcggggatcttccaggacgagcactcctcgctggccaaggcgttcgtcaccgcgcgg
atgcgcgaggtcgtcgcctggagccgggagatcttcggcggcaacgggatcgtgctcgag
tacgacgtggcgcggttcttcgccgacgccgaggcgatctactccttcgagggcacgcgc
gagatgaacaccctgatcgtcggcaaggcgatcaccggacagagcgcgttcgtctga
DBGET
integrated database retrieval system