Astyanax mexicanus (Mexican tetra): 103034009 Help Entry 103034009         CDS       T05042                                  Symbol fdft1 Name (RefSeq) squalene synthase isoform X1   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism amex  Astyanax mexicanus (Mexican tetra) Pathway amex00100   Steroid biosynthesis amex01100   Metabolic pathways Module amex_M00101   Cholesterol biosynthesis, FPP => cholesterol Brite KEGG Orthology (KO) [BR:amex00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     103034009 (fdft1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:amex01006]     103034009 (fdft1) Enzymes [BR:amex01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      103034009 (fdft1) Prenyltransferases [BR:amex01006]  Terpene biosynthesis   Squalene/phytoene synthase    103034009 (fdft1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Octopine_DH GST_C_8 CNV-Replicase_N Motif Other DBs NCBI-GeneID:  103034009 NCBI-ProteinID:  XP_022523657 Ensembl:  ENSAMXG00000033139 LinkDB All DBs Position 1:55191519..55206975 Genome browser AA seq 452 aa AA seqDB search MAGVCCKSSAPFSVFKRTLSVRSSTSTPRPLCLTVGRRGAQEGCLTARPPHLKTASPHRH TACLFFSCQESMSETLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVED DMTIPLEKKVPLLHEFHTFLYQPEWCFTESKEKDRQVLEDFPSISVEFRNLGQEYREVIS DICHRMGFGMAEFLEKKVSSMKEWDKYCHYVAGLVGVGLSRLFSASQLEDPEVGRDTELA NSMGLFLQKTNIIRDYLEDQQEGRAFWPEEAWSQFASRLEDFAQPQNLTSALACLNLLVT DALRHVPDVISYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGIVKIRKGQAVTL MMEATNMQTVQNIIAQYTQEILQKVSLSDPSRDKTLCILGVIQEKTLARTALSSRSHHLS PFYLSAAMLLAALSWQYLNAAQSTGSTDMQGS NT seq 1359 nt NT seq  +upstreamnt  +downstreamnt atggcaggagtttgctgtaagagctcggcgccgttctccgtcttcaagcgcactctctcg gtgcggagctccacctccaccccgcggccgctgtgtctaaccgtgggtcggagaggagct caggagggctgcctgaccgcccgacccccccacctgaagaccgccagccctcatcgacac actgcctgtctcttcttctcttgtcaggaatccatgagcgagactctgaggacctgctac gtttatctgaaccagaccagcaggagcttcgccgctgtgattcaggccctggacggagag ctgcgccatgcagtttgtatattctacctagtccttcgggcactggacacagttgaggat gacatgacgattcctttggagaagaaggttccactgctgcacgagttccacactttcctc taccagccagaatggtgcttcacagaaagtaaagagaaagaccgtcaagtcctagaggac tttccctcgatttcagtggagtttaggaacctcggccaggagtatcgcgaagtgatttct gacatttgccacaggatggggtttggcatggcagaatttcttgagaagaaagtcagctca atgaaagagtgggataagtactgtcactacgtggctggtctggtgggtgtgggtctatct cggcttttctctgcatctcaactggaggatcctgaagtaggacgagacactgaattggcc aactccatgggcttgttcttacaaaagacaaatattatcagggactacctggaagaccag caggaaggccgagctttttggccagaagaggcatggagtcagttcgcttctcgattggag gactttgcacaaccgcaaaacttgacttcagccctggcctgcctcaacctgctagtaact gatgctttgcgacatgtccccgatgtaatctcctacctgtcccgtctccgcaatcagagc gtcttcaacttttgtgcgatcccacaggtgatggcgatagcgactctctctgcatgttac aacaacccacaggtgttccagggcattgtgaaaatcaggaaggggcaggcggtcactttg atgatggaagctactaacatgcaaactgttcagaacatcattgcacagtacactcaagag attctacagaaagtctctctgtctgatccgtcgcgggataagacattgtgcatactgggg gtaatccaggaaaagacacttgctagaacagcactgtcctcccgatctcaccacctctct cctttctacctttctgctgccatgctcctcgctgctctcagctggcagtatctcaatgcc gcacagtctacaggcagcacggacatgcagggcagctaa

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