Ahaetulla prasina (Asian vine snake): 131189043
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Entry
131189043 CDS
T09329
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri00100
Steroid biosynthesis
apri01100
Metabolic pathways
Module
apri_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131189043 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
apri01006
]
131189043 (FDFT1)
Enzymes [BR:
apri01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131189043 (FDFT1)
Prenyltransferases [BR:
apri01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131189043 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
ABC2_membrane_3
SCC3_C
Motif
Other DBs
NCBI-GeneID:
131189043
NCBI-ProteinID:
XP_058020819
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All DBs
Position
1:35374718..35390710
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AA seq
454 aa
AA seq
DB search
MASCSSKAATSLFKRTLAFSPPRAGSGGGGSCSCLTGRLRTCGGTSRLPQRSRPRFLIAQ
AAPPPLLLLQDSLSDSLRVCYKYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVE
DDMTISLEAKVPMLHNFHSYLYQPDWKFMDSREKDRQVLEDFPTISLEFRNLAKVYQDVI
ADICHKMGLGMAEFLEKKVNSNKEWDKYCHYAAGLVGIGLSRLFSASELEDPVIGHDVEL
ANSMGLFLQKTNIIRDYLEDQLEGREFWPKEVWSKYVKKLSDLAKPENIDKAVQCLNELI
TNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIATLAACYNNQQIFKGVVKIRKGQAVT
LMMDATNIHAVKTIMYQYMEEIYQKVPSTDPSSAKTQQIVHTVQSMSLPSGTLVSRTHYS
PFYFSCIMILAALSWQYLNTVSKAAEEYVHTGEN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccagctgcagctccaaagccgccacgtcccttttcaagcgcaccttggccttttct
ccaccgcgtgcaggtagcggcggcggcgggtcgtgttcctgcctgactggccggttgcgg
acctgcggcggcacctctcgtctcccgcaacgctcgcggcctcgctttctgatcgctcag
gctgcccctccgcctctgctccttttgcaggactcgctcagcgacagcctccgggtgtgt
tacaagtacttgaaccaaacgagccggagcttcgccgccgtcatccaagcgctggacggg
gaattgcgccatgcagtgtgcattttctatttggttctccgagctctggatactgtagaa
gatgacatgactatcagtcttgaagctaaggtcccaatgttacacaattttcactcctac
ttatatcagccagactggaaatttatggacagcagagagaaggatagacaagtgctggaa
gactttccaacgatatccttggaattccggaatttggcaaaagtctatcaagatgtgatt
gctgacatttgtcacaagatgggtcttggtatggcagagtttttggaaaagaaagtgaat
tctaacaaagagtgggacaagtattgccactatgctgctggcctggtgggaattggcctc
tcccggctcttctctgcctcagaattagaagatcctgttattggccacgacgtagaactg
gccaactccatgggactcttcctgcagaaaaccaacatcattagggactatctggaggac
caacttgagggcagagaattctggcccaaagaggtttggagcaagtatgtgaagaagctg
tcagatctggctaaaccagagaacattgacaaagccgtccagtgtttgaatgagctcatt
accaacgccttacatcatgttcctgatgtcttgacatatttgtcccgcttgaagaatcaa
agtgtgttcaatttctgtgctattccacaggtgatggctatagctaccttggcagcctgc
tacaacaaccaacagatcttcaaaggtgtggtgaagattcgaaagggacaagcagtcaca
ttgatgatggatgctactaacatacacgctgtcaaaaccatcatgtaccaatatatggaa
gagatctatcagaaggtcccaagcacagacccttcctctgccaaaactcaacagatcgtc
cacactgtccaatccatgagcttacccagtggtaccctggtctcccgaacccattattca
cctttctatttttcctgcattatgattttagctgccttgagctggcagtatctgaacact
gtctcaaaagcagcagaggaatatgtgcacactggtgagaactga
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