Alligator sinensis (Chinese alligator): 102380768
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Entry
102380768 CDS
T02922
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn00100
Steroid biosynthesis
asn01100
Metabolic pathways
Module
asn_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102380768
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
asn01006
]
102380768
Enzymes [BR:
asn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102380768
Prenyltransferases [BR:
asn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102380768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
SCC3_C
DUF2951
Motif
Other DBs
NCBI-GeneID:
102380768
NCBI-ProteinID:
XP_014380277
UniProt:
A0A1U8DGD0
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MTISLETKVPMLHEFHSYLYQPEWRYTESKEKDKQVLEDFPTISLEFRNLAEVYQDVITD
VCRKMGVGMAEYLEKKVNSVQDWDKYCHYVAGLVGIGLSRLFSASELEDPIVGQDVELAN
SMGLFLQKTNIIRDYLQDQLEGREFWPREVWSRYAKKLSDLAKPENADMAVQCLNELITN
ALHHVPDVLKYLSRLKNQSVFNFCAIPQAMAIATLAACYNNKQVFRGVVKIRKGQAVTMM
MDATNVQAVKAIIYQYVEEIYQKIPSTDPSSNKTQQIIASVRTMSLPSSTIVSRNHYSPI
YLSCAMLLAALSWQYLSAMSKTSEEYIQASEN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcagtttagaaactaaagtcccaatgctgcacgagttccactcctacctgtat
cagccagagtggaggtacaccgaaagcaaggagaaggacaagcaagtactggaggacttc
cccacgatttccttggagttcaggaacctggccgaggtgtatcaggatgtgatcactgat
gtttgtcgtaagatgggagtgggaatggcggagtacttggaaaagaaggtcaactccgtg
caggactgggacaagtattgccactatgttgccggactggtagggattggtctttcccgt
ctcttctctgcttcggagcttgaagaccctatcgtaggacaggacgtggagcttgcaaat
tccatggggcttttcctgcagaaaaccaacatcattcgtgattatttgcaggaccagctg
gagggaagggaattctggcccagagaggtttggagcaggtatgccaagaagctctcggat
cttgccaaaccagagaacgctgacatggccgtccagtgtctgaacgagctgatcacaaac
gctctccaccacgtccctgatgtcctcaagtacttgtccagactcaaaaaccaaagtgtc
ttcaacttctgtgctattccacaggcgatggccattgccacgctggctgcttgttacaac
aacaaacaagtgtttaggggtgtcgtgaagattcggaagggacaagctgttaccatgatg
atggatgccacaaatgtgcaggccgtcaaagctataatataccaatatgtggaagagatc
taccagaaaatcccaagcacagacccttcttctaacaagacccagcagatcatcgcctct
gtccggacaatgagtttgcccagcagcaccattgtgtcccgtaaccattattcccccatc
tacctatcctgcgccatgcttttggcagcgctgagctggcagtaccttagcgcgatgtcg
aagacgtcggaggagtacattcaggccagcgagaactga
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