Alligator sinensis (Chinese alligator): 102385901
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Entry
102385901 CDS
T02922
Name
(RefSeq) squalene synthase-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn00100
Steroid biosynthesis
asn01100
Metabolic pathways
Module
asn_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
102385901
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
asn01006
]
102385901
Enzymes [BR:
asn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
102385901
Prenyltransferases [BR:
asn01006
]
Terpene biosynthesis
Squalene/phytoene synthase
102385901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Init_tRNA_PT
NAD_binding_9
Motif
Other DBs
NCBI-GeneID:
102385901
NCBI-ProteinID:
XP_014383123
UniProt:
A0A1U8DPI3
LinkDB
All DBs
Position
Unknown
AA seq
371 aa
AA seq
DB search
MDREYMCGWLGRPAEHCRRKVQVHVGLPGPGTDSLSNGLRTCYRYLEQTGWSFGAAMQAM
DSELRHAACIYFLVLRALDTIEDDMSISLETKIPMLREFHTYLHQPGWRYTESKAKDKQV
LEDFPTISLEFRNLAKVYQDVITDTCHKMGVGMAEFLEKRVDSLQDLEKYCRCVAGLGGI
GFSRLYSASELEDPIVGQDTELASSMTLFMQKTNIIHDYLEDQLEGREFWPREVWSRYAE
KLSDLAKPENATMAVRCLNEMITDALQHVPDVLKYLSRLKNKGVFNYWASLQVIAIATLA
ACYNNKDMFRGIVKMQKEQAVTLMRDATNMQAVKAIMSQHLEEIYQKIPSTDPSSNKTKE
IIASLRPMILS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggacagggagtacatgtgcggctggttgggtcgccctgctgagcactgcaggaggaag
gtgcaggtgcatgttgggctgccagggccaggcacggactcgctcagcaacggcctccgc
acctgctacaggtacctggagcagacgggctggagcttcggtgctgctatgcaggcaatg
gacagcgagctgcgccacgccgcttgcatctacttcctggttctccgagccctggacacc
atagaagacgacatgtccatcagtttggaaacgaagatcccaatgttgcgtgagttccac
acctacctgcatcaaccagggtggaggtacacggagagcaaagccaaggacaagcaagtg
ctggaggacttccccacgatctccttggagttcaggaacctggccaaggtgtatcaggat
gtgatcactgatacttgtcacaagatgggagtgggaatggcggagttcttggaaaagcgg
gtcgactccctgcaggatttggagaagtattgccgctgtgttgctggactcggggggatt
ggtttttcccgtctctactctgcatcagagcttgaagacccgatcgtaggacaggacaca
gagcttgcaagctccatgactcttttcatgcagaaaaccaacatcattcatgattacctg
gaggaccagctggagggaagggaattctggcctagagaggtttggagcaggtatgctgag
aagctctcggatcttgccaaaccagagaatgccaccatggccgtccggtgtctgaatgag
atgatcacagatgctctccagcatgtccccgatgtcctcaagtacttgtccagactcaaa
aacaaaggtgtcttcaactactgggctagtctacaggtgatagccattgccacgctggct
gcttgctacaacaacaaagacatgtttaggggcatagtgaagatgcagaaggaacaagct
gtcactctgatgagggatgccaccaacatgcaggctgtcaaagctataatgtcccagcat
ttggaagagatctaccagaaaatcccaagcacagacccttcttctaacaagaccaaagag
atcatcgcctctctccggccaatgattttgtcctga
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