Agrobacterium tumefaciens Ach5: Ach5_26080
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Entry
Ach5_26080 CDS
T03816
Symbol
gcpE
Name
(GenBank) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf00900
Terpenoid backbone biosynthesis
atf01100
Metabolic pathways
atf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Ach5_26080 (gcpE)
Enzymes [BR:
atf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
Ach5_26080 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
Ach5_26080 (gcpE)
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Motif
Pfam:
GcpE
DUF6036
Motif
Other DBs
NCBI-ProteinID:
AKC08383
UniProt:
A0A1B9UMH4
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All DBs
Position
circular:complement(2700702..2701952)
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AA seq
416 aa
AA seq
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MTSHADYDPKPRRASVAVDVGGVIVGGGAPVVVQSMTNTDTADIDATVQQVAALFQAGSE
MVRITVDRDESAAAVPKIRERLLRLGMDVPLIGDFHYIGHKLLADHPACAEALAKYRINP
GNVGFKDKKDKQFGEIVEMAIRYDKPVRIGVNWGSLDQELLTTLMDKNKEQGFPLSARQV
TREAIVQSALISAELAEEIGLPRNRIILSAKVSQVQDLIAVYSMLSERSNHALHLGLTEA
GMGSKGIVASSAAMGYVLQHGIGDTIRVSLTPEPNGDRTREVQVAQELLQVMGFRQFIPV
VAACPGCGRTTSTVFQELAQNIQNDIRKNMPIWREKYPGVEALNVAVMGCIVNGPGESKH
ADIGISLPGTGESPAAPIFIDGEKALTLRGPNIAADFEALVIDYIEKRFGRKDAAE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacacgccgattacgatccaaagccccgccgtgcatccgttgccgtcgacgta
gggggcgtcatcgtgggtggcggtgcgcctgtcgtcgtacaatccatgaccaataccgac
acggcggatatcgacgccaccgtgcagcaggtggcggcacttttccaggccggttctgaa
atggtgcgcatcaccgtcgatcgcgatgagagcgctgccgctgtgccgaaaatccgcgaa
cggctgctacgccttggcatggacgtgccgctgattggcgatttccactatatcggccac
aagcttctggccgatcatccggcctgtgccgaagcactggcgaaataccgcatcaatccc
ggcaatgtcggcttcaaggacaagaaggacaagcagttcggcgaaatcgtcgaaatggcg
atccgttatgacaagccggttcgcatcggcgtgaactgggggtcgctcgatcaggaattg
ctgacgacgctgatggacaagaacaaggagcagggttttccgctctctgcccgtcaggtc
acccgcgaagccatcgtccagtcggcactgatttccgcagagcttgccgaagaaatcggc
ctgccgcgcaaccgcatcatactgtctgccaaggtcagccaggtacaggacctgattgcc
gtttattcgatgctgtcggaacgctccaaccacgcactgcatctcggtcttaccgaagcc
ggcatgggttccaagggcatcgtcgcctcgtctgctgccatgggttatgtgctgcagcac
ggtattggcgacacgattcgcgtctcgctgacgccggagccgaacggcgaccgcacccgc
gaagtgcaggtggcgcaggaattgctgcaggtcatgggtttccgccagttcattccggtg
gttgcggcatgtcccggctgcgggcgcaccacctctaccgtctttcaggaacttgcccag
aatatccagaatgacattcgcaagaacatgccgatctggcgtgaaaagtatcccggtgtg
gaagcgctcaatgttgctgtcatgggctgcatcgttaatggccccggagaaagcaaacat
gccgatatcggcatatcactgcccggaaccggcgaaagccccgctgcaccgatcttcatc
gatggcgagaaggcgctcaccctgcgcggtcccaacatcgccgcggattttgaagcgctt
gtgatcgattacatcgaaaagcgttttggccggaaagatgcggcggagtaa
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