Bifidobacterium dentium Bd1: BDP_1479
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Entry
BDP_1479 CDS
T01143
Symbol
dcm
Name
(GenBank) dcm Cytosine methyl transferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
bde
Bifidobacterium dentium Bd1
Pathway
bde00270
Cysteine and methionine metabolism
bde01100
Metabolic pathways
Module
bde_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
bde00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
BDP_1479 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bde03000
]
BDP_1479 (dcm)
03032 DNA replication proteins [BR:
bde03032
]
BDP_1479 (dcm)
03036 Chromosome and associated proteins [BR:
bde03036
]
BDP_1479 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
bde02048
]
BDP_1479 (dcm)
Enzymes [BR:
bde01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
BDP_1479 (dcm)
Transcription factors [BR:
bde03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
BDP_1479 (dcm)
DNA replication proteins [BR:
bde03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
BDP_1479 (dcm)
Chromosome and associated proteins [BR:
bde03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
BDP_1479 (dcm)
Prokaryotic defense system [BR:
bde02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
BDP_1479 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_17
LacI
HTH_IclR
HTH_3
HTH_23
HTH_31
HTH_Crp_2
Sigma70_r4
Fe_dep_repress
HTH_Tnp_ISL3
MarR_2
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
ADB10079
UniProt:
D2Q564
LinkDB
All DBs
Position
complement(1656320..1657849)
Genome browser
AA seq
509 aa
AA seq
DB search
MYFLQTWVRTGATNATMAVARAVAVEISMSILLTWTFAYALCAKRATQKILHFIDPSLES
VRMTRLLTASEVAAMLDVSTATVSRMLRTSSIPSEQCGARRVFHSSVVESWMKESNLAPA
PADHPFKGVTTGLVALSFFTGAGGLDLGMEQAGISARLLCENMREARMSIGVNWPDKALV
GDITELDAVTVRRMAGLDEDTEIDVMFGGPPCQAFSTAGARRAFDDPRGNCFLAYLDLAS
QLRPRYLIIENVRGLLSTAYPLKPDGAPVHGGAMRIILDKLEAMGYGVSFQLYDAANYGA
FQHRERVVLIAKRDGTECRYLTPTNADDPKWALPAWRTFREAVAPIEAGPHHYTPLRADR
VKWLHMVPEGGCWTSLPKNMQEQAMGKAYRLGGGKTGFHRRIAWDKPCPTLVTAPTMPAT
LLGHPSEDRVLSIEEYRAVQGFPQSWFIAGKTADVYRQIGNAVPVQLGTAIGRTILADMA
NEPEDDKFTDFPYSRYRNTSDVTWSINAK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcttgcagacttgggtcaggacgggcgccaccaatgctacgatggccgttgcg
agagccgttgcggttgaaatttccatgagcatactccttacgtggacgttcgcgtatgct
ctatgcgcgaaacgcgcaacgcagaaaattttgcattttatagacccgtcgctagaatcg
gtccgcatgaccagacttcttaccgcatccgaagtagcagccatgctcgacgtgtccacc
gcgaccgtctcgcgtatgctccgcacctcatccattcccagcgagcaatgcggggcgcgg
agggtttttcacagctctgtcgtggaatcttggatgaaagagagtaatctggcccctgcc
cctgccgaccatccattcaaaggggtgacaacaggcttggtcgcactgtcattcttcact
ggagctggcggactcgacctcggcatggaacaggccggcattagcgctcgcctcctctgc
gagaatatgcgagaggcacgcatgtcaatcggggtcaactggccggataaagcactcgtc
ggtgatattacagaacttgacgccgtaaccgttcgtcgcatggcgggcttagatgaagac
acggaaatcgatgtcatgttcggcggccctccatgccaagcgttttccacagccggagcc
cgccgcgcatttgatgaccctcgcggcaactgcttcttggcataccttgatttggcctct
caacttcggccacgttatctaatcattgagaatgtgcgtggcctgctttccacggcgtat
ccgcttaaacctgatggtgcgccggtgcatggcggtgccatgcgaattatcttggataag
ctggaggcgatgggctatggggttagcttccagctttacgacgcggccaattatggtgcg
ttccaacatcgtgaacgcgttgtgcttatcgccaaacgtgacggtacggaatgccgttac
ctcacgccaacaaacgcagacgaccctaaatgggccctacccgcatggcgcacattccgt
gaagctgtcgcgcctatcgaagccgggccgcatcactatacgccgttaagagccgaccga
gtcaaatggctccacatggtgcccgaaggcggatgctggacaagcctacccaaaaacatg
caggaacaggccatggggaaggcgtatcgtctcggcggaggcaagaccggatttcacagg
cgtatcgcatgggataaaccatgcccaacactggttacagctcccaccatgcctgcaaca
ctgttagggcatccttccgaagatcgtgtgctgtcgattgaagaataccgcgccgtgcaa
ggattcccccaatcgtggttcattgcgggtaaaacggctgacgtgtatcggcagattggg
aacgcggtccccgtccagctaggaactgccatcggccgtacgattcttgcggacatggca
aacgaaccggaagatgataaatttaccgatttcccttacagtcgttaccggaacacatcg
gacgtaacatggtcaattaacgccaagtga
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integrated database retrieval system
