Brassica oleracea (wild cabbage): 106329014
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Entry
106329014 CDS
T04124
Name
(RefSeq) long chain base biosynthesis protein 2b-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00600
Sphingolipid metabolism
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
106329014
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106329014
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
106329014
Amino acid related enzymes [BR:
boe01007
]
Aminotransferase (transaminase)
Class II
106329014
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
SHMT
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
106329014
NCBI-ProteinID:
XP_013623031
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Position
C3:complement(39700704..39704565)
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AA seq
427 aa
AA seq
DB search
MKDCFARPIASAPDAWFDMVERDWNDGEKVIDRTTNRRRCLNLGSYNYLGFGSFDEYCTP
RVIESLKKLSASTCSSRVDAGTTSVHVELEECVAKYVGKHSAIVFGMGYATNSFIIPVLI
GKGGLIISDSLNHSSIINGARGSGANIRIFQHNTPSHLERILREEIAERQTKTHKPWKKI
IVIVEGIYSMEREICKLPEIVSICKKYKAYVYLDEAHSIGAIGNTGRGVCELLGVNTADM
DIMMGTFSKSFASCGGYIAGSKGAIQYLKHHCPAHLYATSISTPSAQQIISAIRVILGED
GSNRGAQKLARIRENSNYFRSELRNMGFKVLGDVDSPVMPIMLYHPAKIPAFSRECLREN
VAIAVVGFTATPLMLGRARICISASHSKQDLIKALEVISKVGDLTGIKYFPAAPKKQEEE
KDTIKPV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactgttttgcccgtccaatagcgagtgcaccagatgcatggtttgatatggtc
gagcgagactggaacgatggggaaaaagtgatagatcgaacaacaaatagaagaaggtgc
ctcaatttggggtcttacaattatcttggatttggttcattcgatgaatattgcacgcct
cgtgttattgagtctttaaagaaactttcagctagtacatgtagttctcgtgttgatgca
ggaactactagtgtgcatgtagagcttgaggaatgtgtagctaaatatgtgggaaagcat
tctgctattgtctttggcatgggatacgccacaaactcgtttatcattcctgttttgatt
ggaaagggaggattgataataagtgattctttgaaccatagttcaattattaatggtgct
cgaggttctggagccaatatccgtattttccaacacaacacaccttctcacttggaaaga
atactgagagaagaaatagcggaaagacaaaccaaaacacacaaaccctggaagaaaatt
attgttatcgttgaaggtatttacagcatggaaagggagatttgcaagcttcccgagatt
gtgtcgatatgcaagaagtacaaggcatatgtttatttggatgaagctcatagcattgga
gccattgggaatacaggaagaggtgtttgcgaacttcttggagttaatacggctgacatg
gacataatgatgggaaccttcagtaaatcgtttgcctcttgtggtggatatattgccggc
tcgaaaggagctatccaatatttgaagcaccactgcccggctcatctttacgcaacatca
atttcaactccttccgcacaacaaatcatatcggccataagagttatccttggagaggac
ggttccaacagaggggcacaaaagctagcaagaatacgagagaacagcaattattttagg
tctgagctacggaatatgggatttaaggtacttggagacgttgattctccagtcatgcca
ataatgctttaccatccagctaaaatcccagccttctctagggaatgcttgcgagaaaat
gttgcaatcgccgtggtcggtttcacagctacacctctaatgctaggaagggctcgtatt
tgcatatccgcatctcattcaaaacaagatcttattaaagccttagaggttataagcaaa
gtaggtgaccttacaggaatcaaatattttcctgcagctccaaagaagcaagaagaggag
aaagataccatcaaaccggtttag
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