Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110171978
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Entry
110171978 CDS
T05002
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec00100
Steroid biosynthesis
bpec01100
Metabolic pathways
Module
bpec_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
110171978
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
bpec01006
]
110171978
Enzymes [BR:
bpec01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
110171978
Prenyltransferases [BR:
bpec01006
]
Terpene biosynthesis
Squalene/phytoene synthase
110171978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C1
SQS_PSY
Propeptide_C1
Peptidase_C1_2
HAUS4
Motif
Other DBs
NCBI-GeneID:
110171978
NCBI-ProteinID:
XP_020793806
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MDVLKSLGHPEELLNLFKFKMGGCRAVMPKLDYESMSESLRTCYVYLNQTSRSFAAVIQA
LDGELRHAVCIFYLVLRALDTVEDDMTIPLEKKVPMLNNFHTYLYQDEWCFTESQEKDRQ
VLEDFPTISLEFRNLAQEYREVISDICHRMGVGMAEFLEKKVGSMKEWDKYCHYVAGLVG
IGLSQLFSASQLEDPEVGQDSDLANSMGLFLQKTNIIRDYLEDTRDGRAFWPKEAWNQFA
DRLEDFAQPEKLESALSCLNFLXXXXXXXVPDVITYLSRLRNQSVFNFCAIPQVMAIATL
SACYNNPMVFQGVVKIRKGQAVTLMMEATNMRAVQAIIAQYSQEILHKVLLTDPSRDKTL
HVLSVIREKSQSSYVTRAHHLSPMYLSAAMLLAALMTLFVTGTHAHPVSPLEIVNFVNKA
NTTWRAGHNFDDVDVSYYKALCGTIMNGPKLPEVFHNTENIQLPDSFDAREQWPNCPTIA
QIRDQGNCGSCWAFGAVEAISDRICILSDGKVTVQISAEDLLTCCDECGMGCYGGFPSAA
WDYWAQNGLVTGGLYNSKVGCRPYTIAPCEHHVNGSRPPCQGETETPKCVEQCVSGYSPS
YPKDKHFGGHTYYVPSNEDQIKTELYKNGPVEAAFNVYADFLQYKSGVYQHVTGDMLGGH
AVKVLGWGVEKGTPYWLVANSWNEDWGDKGYFKIKRGNDECGIESEIVAGMPR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggacgttttgaaatctttggggcatccggaggagctgctcaatttattcaagttcaaa
atgggtggctgcagagctgtcatgccgaagttggattatgagtccatgagcgagagtctc
aggacctgctacgtgtacctgaaccaaaccagccgaagttttgcagctgtcatccaggcc
ttggacggagagctgagacatgcagtgtgtattttctacctggtactgcgagccttggac
actgttgaggacgacatgaccatcccactggaaaagaaggtgcccatgttgaataacttc
cacacttatctgtaccaggatgagtggtgcttcaccgagagccaggagaaggaccgtcaa
gtcctggaggatttccccactatatcactggaattcagaaacctcgctcaggaatacaga
gaggtcatctcagatatctgccacagaatgggagtgggaatggctgaatttttggagaag
aaagttggatccatgaaggagtgggacaaatactgccactatgtggctgggctggtcggc
atcggcctgtcacagctgttctctgcatctcagcttgaggaccctgaagtgggacaagac
agtgacctggccaattcaatgggcttgtttctacagaagaccaacatcattcgagattat
ctggaggacactcgagatggacgtgctttttggccaaaagaggcgtggaaccagtttgca
gaccgtctggaggactttgcgcagccagagaagctggagtctgccctgtcctgtctcaac
tttttgnnnnnnnnnnnnnnnnnnnatgtcccagacgtcatcacgtatctgtcccgtcta
cgcaaccagagcgtgtttaatttctgtgcaattccacaggtaatggcaatagcaacatta
tcagcatgctacaacaaccccatggtctttcagggagttgtgaagatcagaaaaggacaa
gcagtgacacttatgatggaggccaccaatatgagagctgtgcaggccatcattgcccag
tacagtcaagagattttacataaggtgttgctcacagacccgtcacgggacaagactcta
catgtactcagtgttattcgagagaaatcccagtccagctatgtcaccagagcacatcat
ttgtcgcccatgtacttgtctgctgctatgctcctcgctgccctcatgacactttttgtc
accgggacccatgctcaccctgtgtctcctttggagatagttaattttgtgaataaagcc
aacactacatggagagctggacataactttgatgatgttgatgtttcctactataaagct
ttatgtgggactattatgaatggaccaaagttgccagaggtctttcacaacactgagaac
atacaacttccagatagttttgatgcccgtgagcagtggcctaactgtcccaccatcgca
cagattcgagaccaaggaaattgtggatcctgctgggcctttggggcagtggaggccata
tcagaccgtatctgcattctgagcgatgggaaggtgacagtgcagatttcagcagaggac
ctcctaacctgctgtgatgagtgtggcatgggatgttacggtggttttccttctgctgcc
tgggattactgggcacagaatggactggtcacaggaggcttgtataactccaaagtggga
tgtcgaccctacactattgctccctgtgagcatcatgttaatggctcaaggcctccatgc
caaggtgagacagaaaccccaaaatgtgtggagcagtgcgtcagtggatactctccctcc
tatcccaaggacaagcactttggtggacacacatactatgtccccagcaatgaggaccaa
atcaagactgagttgtacaagaacggaccagtagaagctgccttcaatgtttatgctgat
tttctccaatacaaatccggtgtgtaccagcatgtaacaggagacatgctcggtggtcat
gctgtcaaagttctgggctggggggtggagaagggcaccccctactggctggtggcaaac
tcttggaatgaggactggggtgataaaggttacttcaagatcaaacgtggaaacgatgaa
tgtggtattgaatctgagatagtcgcgggcatgccacggtag
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