Carassius auratus (goldfish): 113116203
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Entry
113116203 CDS
T07313
Name
(RefSeq) nucleoporin SEH1-like
KO
K14299
nucleoporin SEH1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113116203
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113116203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113116203
04131 Membrane trafficking [BR:
caua04131
]
113116203
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113116203
Membrane trafficking [BR:
caua04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
113116203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
113116203
NCBI-ProteinID:
XP_026139984
Ensembl:
ENSCARG00000018204
UniProt:
A0A6P6R2M9
LinkDB
All DBs
Position
16:complement(13981540..13987014)
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AA seq
351 aa
AA seq
DB search
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSIKVWDKGGNGEWNCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAIVWEEIVGESNDKQRGQSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISSKLSCSCISWNPSSSRAHAP
MIAVGSDDSNVTYGGKVQIYEYNDVTRKYAKAETLMTVADAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPLRKDSSSSAPTKFEVQVLAQFDSHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSSVSGQPGVLSGVLGSAAALSALNGATGR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtcgcgcgcagtatcgcagccgatcataaagatctgattcacgatgtttcttat
gactttcacgggcggagaatggcgacgtgctccagcgaccagagcattaaggtgtgggat
aagggtggtaatggagaatggaactgcacagcaagctggaaaactcacagtggctcggtg
tggagagtgacctgggcccatccagagtttggacaagtgttggcgtcctgctcctttgac
cgtactgccatagtatgggaggagattgttggagagtccaatgacaaacaacgagggcaa
agccattggataaagagaaccacacttgtggacagtcggacatctgtgaccgatgtgaag
tttgccccgaagcacatgggcttgatgctgaccacatgttctgcagacggggtggtgcga
atctacgaggcccctgacgtgatgaacctgagccagtggtccctgcagcatgagatctca
tccaaactctcctgctcctgcatctcctggaacccttccagttcccgagctcatgcacct
atgattgcagtgggtagcgatgacagcaacgtaacgtatggcggcaaagttcagatttac
gagtataacgatgttacaaggaaatatgccaaagcagagacactgatgaccgttgcagat
gctgtacatgatattgcgtttgctccaaatctgggacggtctttccatgtacttgctatt
gcaaccaaagacgtgcgcatcttcaaactggttccacttcgaaaggacagctcttcttca
gcacccactaaatttgaggtgcaggtgctggctcagtttgacagtcataactctcaggtg
tggcgggtcagctggaacatcaccagtacacttctggcttcatctggtgacgatggttgt
gtgagactctggaaagccaactatatggacaattggaagtgcacaggtattctaaaggga
gatggtagttcagtatccggtcagcctggtgtgctgagcggcgtcctgggatctgctgct
gcactgagtgccctaaacggggccaccggaagatag
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