Coregonus clupeaformis (lake whitefish): 121543079
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Entry
121543079 CDS
T08357
Name
(RefSeq) GATOR complex protein MIOS isoform X1
KO
K20407
SEA/GATOR complex protein SEA4/MIOS
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121543079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121543079
Membrane trafficking [BR:
cclu04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
121543079
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
MIOS_WD40
MIOS_a-sol
zinc_ribbon_16
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121543079
NCBI-ProteinID:
XP_045064640
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Position
28:20426494..20436028
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AA seq
882 aa
AA seq
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MSGSKPDILWSPHHADRYVICDSELGLYRIGPVGCGETKAGALPLSEETAATLLAINSDT
PYMKCVAWYPKHEPECLLAVGQANGRVVLTSLGQSHNSKCKELMGKEFVPKHARQCNTLA
WNPLDSNWLAAGLDKHRADFSVLIWDISSKFSPEASVAAEKIRLSSGDTDSGLVVTKPLY
ELGQNDACLSLCWLPRDQKLLLAGMHRNLAIFDLRNTSQKTFVNTKAIQGVTVDPHFPDR
VASFFEGQVAIWDLRKFEKPVLTLTEQPKPLTKVAWCPTRMGLLATLTRDSNIIRLYDMQ
HTPTPIGDETEPTIIERSVQPSNSLIGSFAWHPTSQNRMVVVSAANRAMTDFTVFERISL
AWSSTTSLMWACGRHLYECAEEGGVGGEGTVEKDIATKMRQRAQSRYGHDTVQVWKNHLL
AGGDDPQLKSLWYTLFFMKQYTEDMEQKQQANKQALVYSGIKNIVKSSSGTTENRRCWSG
SDLQTDVPRFHSEERSLALRLCGWISRGPDINVEPFLRSLEGEGAWERAAAVALFNLDIR
RAIQILNKGASAERGDLNLNVVAMALSGYTDEKSSLWREMCSSLRLQLKNPYLCVMFAFL
TSEPGSYDGVLYESSVAVTDRVAFACMFLNDAQLPRYMEKLTSEMKEVGNLEGILLTGLT
KDGVDLMESYVDRTGDVQTASFCMLKGSPGEVVKDPRVQCWIENYRNLLDAWRFWHKRAE
FDIHRSKLDPSSKPLAQVFVSCNFCGKSISYSCSAMPHQGRGFSQYGVSGSPTKSKVTSC
PGCRKPLPRCALCLMNMGTPVSNCPGTGHGTGKSDEKVDLTRENKLAQFNNWLTWCHNCR
HGGHAGHILSWFRDHTECPVSACTCKCMQLDTTGNLVPSDSH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttcaaagccagacatcctgtggtctccccaccacgctgaccgctatgtcatc
tgtgactcagagcttggactgtaccgcattggacctgtggggtgcggcgagaccaaagcc
ggagccctccccctctctgaggagaccgctgctaccctattagctatcaactctgacacc
ccatacatgaaatgtgtggcctggtacccaaagcacgagcctgagtgtctgctagcggtt
ggacaggctaacggcagggtagtcctcactagcctagggcagagccacaactccaagtgc
aaggagctgatggggaaggagtttgtgcccaagcatgcacgtcaatgcaacaccctagcc
tggaaccctttggacagcaactggctagccgcagggctggacaagcacagagcagacttc
tcagtgctcatatgggacattagcagtaagttctccccagaggctagtgtagccgctgaa
aagatccgtctctcgtcaggagacacagactctggcctagtggtgaccaagcccctgtat
gagctaggccagaacgatgcctgcctgtccctctgctggctgccccgtgaccagaagctg
ctcctggctggcatgcaccgcaacctggccatctttgacctgcgcaacaccagccagaag
acctttgtcaacaccaaggccatccagggtgtgacagtggacccccacttccccgaccgc
gtggcctccttcttcgagggccaggtggccatctgggacctgcgcaagtttgagaagcca
gtgctcacgctcaccgagcagcccaagccgctcaccaaggtggcctggtgccccacgcgt
atgggcttgttggccacgctaacgcgcgacagcaacatcatccgcctttacgacatgcag
cacacgcccacgcccatcggcgacgagacagagcccacgatcatcgagcgcagcgtgcag
cccagcaacagcctcatcggcagcttcgcctggcacccaacttcccagaaccgcatggtg
gtggtttcggccgccaaccgtgccatgaccgacttcacagtgttcgaacgtatctcttta
gcctggagctccaccacttcgctcatgtgggcctgcggcaggcacctgtatgagtgtgcc
gaggaggggggcgtgggaggggagggtacagtagagaaggacatagccactaagatgagg
cagagggcccagtccaggtacggtcatgatacggtccaggtgtggaagaaccatctgctg
gctggaggggacgacccccagctcaagtccctgtggtacactctattcttcatgaagcag
tacactgaagacatggagcagaaacagcaggcgaacaaacaggccctggtctattcaggc
atcaagaacatagtcaagtccagctcaggcactacggagaaccggcggtgctggagcggc
tcggacctccagacggacgtacccaggttccacagcgaggagcgcagccttgccctgcgt
ctatgtggctggatcagtcgggggcctgacatcaacgtggagcccttcctgcgctccctg
gagggggagggcgcgtgggagcgtgcggccgctgtggccctcttcaacctggacattcgc
agggccatccagatcctcaacaagggagcctccgctgagagaggggacctgaacctaaac
gtggttgccatggctttgtcaggctacacggacgagaagagttccctgtggagggagatg
tgcagctctctgaggctgcagctcaagaacccctacctgtgtgtcatgtttgccttcctc
acaagtgagcctggcagctacgatggagtactgtatgagagtagtgtggccgtaactgac
cgagtggccttcgcatgcatgttccttaacgacgcacagctgcctcgctacatggagaag
ctgaccagtgagatgaaggaggtggggaacctggaggggatcctgctgacggggctgacc
aaagacggagtggacctgatggagagctacgtggaccggaccggagacgtccagaccgcc
agcttctgcatgctcaagggttccccaggggaggtggtgaaggacccgcgtgtccagtgc
tggatcgagaactaccgcaacctgctggacgcatggaggttctggcacaaacgggctgag
tttgacatccacaggagcaagctggaccccagctccaaaccactggcacaggtgtttgtg
agctgtaacttctgtgggaaatccatatcgtacagctgctcggccatgccccaccagggc
cgcggcttcagccagtacggggtcagcggctcgcccaccaagtcaaaggtcaccagctgc
cccggctgcaggaagcccctcccccgctgtgccctctgcctcatgaacatgggcacgcct
gtgtccaactgcccaggtactggacatggcacggggaagtcagacgagaaggtggatctg
accagggagaacaaactggcccagttcaacaactggttaacctggtgccacaactgccgc
catggtggccacgcaggtcacatactcagctggtttagggaccatacagagtgtccagtg
tcggcctgcacctgtaagtgcatgcagctggacaccacaggaaacctggtgccttcagac
agccactag
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