Coregonus clupeaformis (lake whitefish): 121558060
Help
Entry
121558060 CDS
T08357
Name
(RefSeq) glutamate receptor 4 isoform X1
KO
K05200
glutamate receptor 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121558060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121558060
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121558060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
121558060
NCBI-ProteinID:
XP_041727475
LinkDB
All DBs
Position
5:41230490..41418730
Genome browser
AA seq
903 aa
AA seq
DB search
MRIIYPHFLGVFSALWVLATGAFPSSVQIGGLFIRNTDQEYTAFRLAIFLHNTSPNATEA
PFNLVPHVDNIETANSFAVTNAFCSQYSRGVFAIFGLYDKRSVHTLTSFCSALHISLVTP
SFPTEGEGQFTLQLRPSIRGALLSLLDHYDWSRFVFLYDTDRGYAILQAIMERAGQNGWQ
VSAICVESFNEAAYRRLLEDLDRRQERKYVIDLEPERLQSILEQAVSVGKHVKGYHYILA
NLGFKDISLERFMHGGANVTGFQLVDFSKPMVLKLMQRWNKLDQREYPGSDIPPKYTSSL
TYDGVLVMAEAFRNLRRQKIDISRRGNAGDCLANPAAPWNQGIDMERTLKQVRIQGLTGN
IQFDHYGRRVNYTMDVFELKSNGPQRIGYWNDIDKLVLVQNEVLLSNDSTNIENRTVVVT
TIMEGPYVMLKKNWEMFEGNDQFEGYCVDLASEIAKHIGIKYKIAIVPDGKYGARDPETK
IWNGMVGELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFL
DPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHAEEPEEGSTEPGPTDQPPNEFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTTAEGVARVRKS
KGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGIATPKGSLLRNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKSSQALSLSNVAGVFYILVGGLGLAMLVALVEFC
YKSRAEAKRMKLPFTEAMRNKARLSITGSVGENGRVLTPDCPKAVHAGHSLRHPGLSLPS
GLP
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaggattatttacccgcactttctcggggtgttttccgccctttgggtgctagcgact
ggggctttccccagcagtgttcagataggtggtctatttatcaggaacacagatcaggag
tacacagcgtttcgattggctatcttcctgcacaacaccagccccaatgccacggaggct
cctttcaacctggtaccccacgtcgacaacatcgagacagctaacagcttcgccgtcaca
aatgccttctgttcgcagtactcacggggtgtgtttgcaatcttcggcctgtacgacaag
cgttcggtgcacaccctgacgtcgttctgcagcgctctgcacatctccctggtcacaccc
agtttccccacggagggggagggccagttcacacttcagctccgcccctctatcagagga
gctctgctgtctctgctggaccactacgactggagccgctttgtattcctctacgacaca
gacagaggttacgccatcctacaggcaatcatggagcgagcaggtcaaaacggttggcag
gtgagtgccatctgcgtggagagtttcaacgaggcagcgtaccgtcgtctgctagaagac
ctggaccgccggcaggagcggaagtatgtcatcgacctggagcctgagagactgcagagc
attctagaacaggctgttagtgtggggaaacatgtcaaaggctaccattacatcttggcc
aacctgggttttaaagacatatctctagagaggtttatgcatggtggggctaacgtcaca
gggttccagttggttgacttcagtaagcccatggtcctcaaactgatgcagcgctggaac
aaactggaccagagagagtacccaggctctgacatcccacccaagtacacctcgtctctg
acgtatgatggagtgttggtgatggccgaggcctttaggaacctgcgtcgtcagaagata
gacatctcccgtagaggaaatgctggagactgtctggccaaccccgctgctccctggaac
cagggcatagacatggaacgcacactcaaacaggtgcgtatccagggtctaacaggcaac
atccagtttgaccactatggccgcagagtcaactacaccatggacgtgtttgaactgaag
agcaacggaccacaacggattggctactggaacgacattgacaaactggttctggtccag
aatgaggtgctgttgtccaatgacagcacaaacattgagaacagaacagtcgtcgtgaca
actatcatggagggtccatatgtgatgctgaagaagaactgggagatgtttgaggggaat
gaccagttcgagggctactgcgtggacttggcctcagagatcgccaaacacatcggcatc
aagtacaagattgccatcgtccccgacggcaaatacggagccagagaccccgagaccaag
atctggaacggcatggtgggagaactggtctatgggaaagcagagatagcggtagcccct
ctgactataaccctggtccgtgaggaggtgatagacttctcgaagcccttcatgtccttg
gggatctccatcatgatcaagaagccccagaagtctaaacctggagtgttctctttcctg
gacccgctggcctacgagatctggatgtgcatcgtcttcgcttacataggagtcagcgtg
gtgctatttctggtgagtcgtttcagtccgtatgagtggcatgcagaggaaccagaggag
ggctctactgagccaggtcccactgaccagccacccaacgagtttggcatcttcaactct
ctctggttctcactgggggccttcatgcagcagggctgcgacatctcaccacggtctctg
tcggggcgtatagtggggggcgtgtggtggttcttcactctcatcatcatctcgtcctac
acggccaacctggcagctttcctcacagtggagaggatggtgtcgcccatagagagtgct
gaggacctggccaagcagacggagatcgcctatggaacactggactcaggctccaccaag
gagttcttcaggaggtcaaagatcgcggtatatgagaagatgtggtcctatatgaagtct
gctgagccttctgtcttcgctaagaccacagcggagggtgtggctcgcgtccgcaagtcc
aaaggaaagtacgctttcctcctggagtccaccatgaatgagtacacggaacaacgcaag
ccctgcgacacgatgaaagttggaggcaacctggactccaagggatatggtatcgccaca
cctaaaggctcactgctaagaaatgcggtcaacctggccgtgttaaaactcaacgagcag
ggcctgttggacaaattgaaaaataaatggtggtacgacaagggagagtgtggcagcggg
ggaggggactcaaaggacaagtcctcccaggccctgagcctgagcaacgtggccggggtc
ttctacatcctggtggggggtctgggcctggccatgctggtggccctggtcgagttctgc
tacaagtcgcgcgccgaggccaagcgcatgaagctccccttcacagaagccatgcggaac
aaggctcggctgtcaatcacgggcagtgtgggtgagaatgggcgtgtcttaaccccagac
tgccctaaggccgtccatgctggccactccctcagacacccagggctttctctaccctcg
ggcctaccctga
DBGET
integrated database retrieval system